RNA–Protein interactions for RNA: ENST00000368207.7

PTPRK-203, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5 BASIC

Gene PTPRK, Length 4,758 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-203ENST00000368207 CNGA4Q8IV77 575 aa13.82□□□□□ -0.2
PTPRK-203ENST00000368207 BLIDQ8IZY5 108 aa13.82□□□□□ -0.2
PTPRK-203ENST00000368207 RGS22Q8NE09 1264 aa13.82□□□□□ -0.2
PTPRK-203ENST00000368207 NSUN7Q8NE18 718 aaKnown RBP13.82□□□□□ -0.2
PTPRK-203ENST00000368207 ZNF408Q9H9D4 720 aa13.82□□□□□ -0.2
PTPRK-203ENST00000368207 ATP8A2Q9NTI2 1148 aa13.82□□□□□ -0.2
PTPRK-203ENST00000368207 LEMD3Q9Y2U8 911 aa13.82□□□□□ -0.2
PTPRK-203ENST00000368207 CUL4AQ13619 759 aa13.82□□□□□ -0.2
PTPRK-203ENST00000368207 NECTIN1Q15223 517 aa13.82□□□□□ -0.2
PTPRK-203ENST00000368207 HAUS3Q68CZ6 603 aa13.82□□□□□ -0.2
PTPRK-203ENST00000368207 KRT27Q7Z3Y8 459 aa13.82□□□□□ -0.2
PTPRK-203ENST00000368207 CABP7Q86V35 215 aa13.82□□□□□ -0.2
PTPRK-203ENST00000368207 GTPBP4Q9BZE4 634 aaKnown RBP13.82□□□□□ -0.2
PTPRK-203ENST00000368207 GPHNQ9NQX3 736 aaPredicted RBP13.82□□□□□ -0.2
PTPRK-203ENST00000368207 TCP10L2B9ZVM9 353 aa13.82□□□□□ -0.2
PTPRK-203ENST00000368207 SLU7O95391 586 aaKnown RBP13.82□□□□□ -0.2
PTPRK-203ENST00000368207 PAK1Q13153 545 aa13.82□□□□□ -0.2
PTPRK-203ENST00000368207 KIFC2Q96AC6 838 aa13.82□□□□□ -0.2
PTPRK-203ENST00000368207 CLIC4Q9Y696 253 aa13.82□□□□□ -0.2
PTPRK-203ENST00000368207 TNS3Q68CZ2 1445 aa13.82□□□□□ -0.2
PTPRK-203ENST00000368207 CTAGE9A4FU28 777 aa13.82□□□□□ -0.2
PTPRK-203ENST00000368207 SCG2P13521 617 aa13.82□□□□□ -0.2
PTPRK-203ENST00000368207 DIXDC1Q155Q3 683 aa13.82□□□□□ -0.2
PTPRK-203ENST00000368207 IFI16Q16666 785 aaKnown RBP13.82□□□□□ -0.2
PTPRK-203ENST00000368207 CNNM4Q6P4Q7 775 aa13.82□□□□□ -0.2
PTPRK-203ENST00000368207 GAS2L3Q86XJ1 694 aa13.82□□□□□ -0.2
PTPRK-203ENST00000368207 CAPZA3Q96KX2 299 aa13.82□□□□□ -0.2
PTPRK-203ENST00000368207 GLT8D2Q9H1C3 349 aa13.82□□□□□ -0.2
PTPRK-203ENST00000368207 KIAA1468Q9P260 1216 aa13.82□□□□□ -0.2
PTPRK-203ENST00000368207 MCAMP43121 646 aa13.81□□□□□ -0.2
PTPRK-203ENST00000368207 ZNF827Q17R98 1081 aa13.81□□□□□ -0.2
PTPRK-203ENST00000368207 GPR101Q96P66 508 aaPredicted RBP13.81□□□□□ -0.2
PTPRK-203ENST00000368207 TAB2Q9NYJ8 693 aa13.81□□□□□ -0.2
PTPRK-203ENST00000368207 NBPF26B4DH59 902 aa13.81□□□□□ -0.2
PTPRK-203ENST00000368207 RPL13P26373 211 aaKnown RBP13.81□□□□□ -0.2
PTPRK-203ENST00000368207 NBPF10Q6P3W6 841 aaKnown RBP13.81□□□□□ -0.2
PTPRK-203ENST00000368207 NBPF15Q8N660 670 aa13.81□□□□□ -0.2
PTPRK-203ENST00000368207 DNAI2Q9GZS0 605 aa13.81□□□□□ -0.2
PTPRK-203ENST00000368207 MED14O60244 1454 aa13.81□□□□□ -0.2
PTPRK-203ENST00000368207 B4DLN1 442 aa13.81□□□□□ -0.2
PTPRK-203ENST00000368207 POTEB2H3BUK9 544 aa13.81□□□□□ -0.2
PTPRK-203ENST00000368207 FTOQ9C0B1 505 aaKnown RBP eCLIP13.81□□□□□ -0.2
PTPRK-203ENST00000368207 DBNDD1Q9H9R9 158 aa13.81□□□□□ -0.2
PTPRK-203ENST00000368207 CLTCQ00610 1675 aaKnown RBP13.81□□□□□ -0.2
PTPRK-203ENST00000368207 INO80Q9ULG1 1556 aaPredicted RBP13.81□□□□□ -0.2
PTPRK-203ENST00000368207 PPEF1O14829 653 aaPredicted RBP13.8□□□□□ -0.2
PTPRK-203ENST00000368207 HARSP12081 509 aaKnown RBP13.8□□□□□ -0.2
PTPRK-203ENST00000368207 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.8□□□□□ -0.2
PTPRK-203ENST00000368207 RRAGDQ9NQL2 400 aaPredicted RBP13.8□□□□□ -0.2
PTPRK-203ENST00000368207 DYDC1Q8WWB3 177 aa13.8□□□□□ -0.2
PTPRK-203ENST00000368207 TMOD4Q9NZQ9 345 aa13.8□□□□□ -0.2
PTPRK-203ENST00000368207 KCNQ2O43526 872 aa13.8□□□□□ -0.2
PTPRK-203ENST00000368207 CERKLQ49MI3 558 aaPredicted RBP13.8□□□□□ -0.2
PTPRK-203ENST00000368207 NELFCDQ8IXH7 590 aa13.8□□□□□ -0.2
PTPRK-203ENST00000368207 CNKSR1Q969H4 720 aa13.8□□□□□ -0.2
PTPRK-203ENST00000368207 THRAP3Q9Y2W1 955 aaKnown RBP13.8□□□□□ -0.2
PTPRK-203ENST00000368207 IMPG2Q9BZV3 1241 aa13.8□□□□□ -0.2
PTPRK-203ENST00000368207 ZSWIM5Q9P217 1185 aa13.8□□□□□ -0.2
PTPRK-203ENST00000368207 CCDC169A6NNP5 214 aa13.79□□□□□ -0.2
PTPRK-203ENST00000368207 SEMA3EO15041 775 aa13.79□□□□□ -0.2
PTPRK-203ENST00000368207 NDUFA8P51970 172 aa13.79□□□□□ -0.2
PTPRK-203ENST00000368207 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.79□□□□□ -0.2
PTPRK-203ENST00000368207 SYNCQ9H7C4 482 aa13.79□□□□□ -0.2
PTPRK-203ENST00000368207 ARHGEF35A5YM69 484 aa13.79□□□□□ -0.2
PTPRK-203ENST00000368207 GBP2P32456 591 aaPredicted RBP13.79□□□□□ -0.2
PTPRK-203ENST00000368207 CKAP4Q07065 602 aaKnown RBP13.79□□□□□ -0.2
PTPRK-203ENST00000368207 MCM6Q14566 821 aa13.79□□□□□ -0.2
PTPRK-203ENST00000368207 CCDC122Q5T0U0 273 aa13.79□□□□□ -0.2
PTPRK-203ENST00000368207 NEXMIFQ5QGS0 1516 aa13.79□□□□□ -0.2
PTPRK-203ENST00000368207 BBOX1O75936 387 aa13.79□□□□□ -0.2
PTPRK-203ENST00000368207 CYP19A1P11511 503 aaPredicted RBP13.79□□□□□ -0.2
PTPRK-203ENST00000368207 GJC1P36383 396 aa13.79□□□□□ -0.2
PTPRK-203ENST00000368207 XPO4Q9C0E2 1151 aaKnown RBP13.79□□□□□ -0.2
PTPRK-203ENST00000368207 C1orf167Q5SNV9 1468 aa13.78□□□□□ -0.2
PTPRK-203ENST00000368207 CARMIL3Q8ND23 1372 aa13.78□□□□□ -0.2
PTPRK-203ENST00000368207 USP17L8P0C7I0 530 aa13.78□□□□□ -0.2
PTPRK-203ENST00000368207 TECP42680 631 aa13.78□□□□□ -0.2
PTPRK-203ENST00000368207 ICA1Q05084 483 aa13.78□□□□□ -0.2
PTPRK-203ENST00000368207 KIAA0753Q2KHM9 967 aa13.78□□□□□ -0.2
PTPRK-203ENST00000368207 DPH6Q7L8W6 267 aa13.78□□□□□ -0.2
PTPRK-203ENST00000368207 MAATS1Q7Z4T9 603 aa13.78□□□□□ -0.2
PTPRK-203ENST00000368207 CPS1P31327 1500 aa13.78□□□□□ -0.2
PTPRK-203ENST00000368207 TMEM110-MUSTN1A8MSY1 372 aa13.78□□□□□ -0.2
PTPRK-203ENST00000368207 CETN3O15182 167 aa13.78□□□□□ -0.2
PTPRK-203ENST00000368207 CMA1P23946 247 aa13.78□□□□□ -0.2
PTPRK-203ENST00000368207 PTGDRQ13258 359 aa13.78□□□□□ -0.2
PTPRK-203ENST00000368207 BMS1Q14692 1282 aaKnown RBP13.78□□□□□ -0.2
PTPRK-203ENST00000368207 ARFGAP3Q9NP61 516 aa13.78□□□□□ -0.2
PTPRK-203ENST00000368207 DNM3Q9UQ16 869 aa13.78□□□□□ -0.2
PTPRK-203ENST00000368207 PPP1R2P41236 205 aa13.78□□□□□ -0.2
PTPRK-203ENST00000368207 CTR9Q6PD62 1173 aa13.78□□□□□ -0.2
PTPRK-203ENST00000368207 AIFM3Q96NN9 605 aa13.78□□□□□ -0.2
PTPRK-203ENST00000368207 TAOK3Q9H2K8 898 aa13.78□□□□□ -0.2
PTPRK-203ENST00000368207 ATP10DQ9P241 1426 aa13.78□□□□□ -0.2
PTPRK-203ENST00000368207 CLRN2A0PK11 232 aa13.78□□□□□ -0.2
PTPRK-203ENST00000368207 RPS6KA4O75676 772 aa13.78□□□□□ -0.2
PTPRK-203ENST00000368207 KRT9P35527 623 aa13.78□□□□□ -0.2
PTPRK-203ENST00000368207 HOOK3Q86VS8 718 aa13.78□□□□□ -0.2
PTPRK-203ENST00000368207 DHX37Q8IY37 1157 aaKnown RBP13.78□□□□□ -0.2
PTPRK-203ENST00000368207 RASGRP4Q8TDF6 673 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 145 ms