RNA–Protein interactions for RNA: ENST00000366860.9

CNIH4-204, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 3

Gene CNIH4, Length 912 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-204ENST00000366860 KANSL2Q9H9L4 492 aa18.37■□□□□ 0.53
CNIH4-204ENST00000366860 TSHZ2Q9NRE2 1034 aa18.37■□□□□ 0.53
CNIH4-204ENST00000366860 CSADQ9Y600 493 aa18.37■□□□□ 0.53
CNIH4-204ENST00000366860 PHIPQ8WWQ0 1821 aa18.37■□□□□ 0.53
CNIH4-204ENST00000366860 IGKV6D-41A0A0C4DH26 115 aa18.36■□□□□ 0.53
CNIH4-204ENST00000366860 TRAF5O00463 557 aa18.36■□□□□ 0.53
CNIH4-204ENST00000366860 TOMM70O94826 608 aa18.36■□□□□ 0.53
CNIH4-204ENST00000366860 SLURP2P0DP57 97 aa18.36■□□□□ 0.53
CNIH4-204ENST00000366860 IFIT1BQ5T764 474 aaKnown RBP18.36■□□□□ 0.53
CNIH4-204ENST00000366860 Q6ZUG5 572 aa18.36■□□□□ 0.53
CNIH4-204ENST00000366860 CHST3Q7LGC8 479 aa18.36■□□□□ 0.53
CNIH4-204ENST00000366860 ENAHQ8N8S7 591 aaPredicted RBP18.36■□□□□ 0.53
CNIH4-204ENST00000366860 CEP95Q96GE4 821 aa18.36■□□□□ 0.53
CNIH4-204ENST00000366860 TCEANC2Q96MN5 208 aa18.36■□□□□ 0.53
CNIH4-204ENST00000366860 TBC1D2Q9BYX2 928 aa18.36■□□□□ 0.53
CNIH4-204ENST00000366860 PICK1Q9NRD5 415 aa18.36■□□□□ 0.53
CNIH4-204ENST00000366860 SYNPO2Q9UMS6 1093 aa18.36■□□□□ 0.53
CNIH4-204ENST00000366860 STX8Q9UNK0 236 aa18.36■□□□□ 0.53
CNIH4-204ENST00000366860 TTLL1O95922 423 aa18.35■□□□□ 0.53
CNIH4-204ENST00000366860 AK2P54819 239 aa18.35■□□□□ 0.53
CNIH4-204ENST00000366860 SEC23AQ15436 765 aa18.35■□□□□ 0.53
CNIH4-204ENST00000366860 SGMS1Q86VZ5 419 aa18.35■□□□□ 0.53
CNIH4-204ENST00000366860 ANKRD13AQ8IZ07 590 aa18.35■□□□□ 0.53
CNIH4-204ENST00000366860 ZKSCAN3Q9BRR0 538 aa18.35■□□□□ 0.53
CNIH4-204ENST00000366860 SH2D4AQ9H788 454 aa18.35■□□□□ 0.53
CNIH4-204ENST00000366860 ZNF408Q9H9D4 720 aa18.35■□□□□ 0.53
CNIH4-204ENST00000366860 LY9Q9HBG7 655 aa18.35■□□□□ 0.53
CNIH4-204ENST00000366860 MTMR4Q9NYA4 1195 aa18.35■□□□□ 0.53
CNIH4-204ENST00000366860 PTPRFP10586 1907 aa18.34■□□□□ 0.53
CNIH4-204ENST00000366860 CCDC69A6NI79 296 aa18.34■□□□□ 0.53
CNIH4-204ENST00000366860 USP2O75604 605 aaPredicted RBP18.34■□□□□ 0.53
CNIH4-204ENST00000366860 CELF2O95319 508 aaKnown RBP18.34■□□□□ 0.53
CNIH4-204ENST00000366860 ITGBL1O95965 494 aaPredicted RBP18.34■□□□□ 0.53
CNIH4-204ENST00000366860 INPP5BP32019 993 aa18.34■□□□□ 0.53
CNIH4-204ENST00000366860 NOVP48745 357 aa18.34■□□□□ 0.53
CNIH4-204ENST00000366860 MAP3K9P80192 1104 aa18.34■□□□□ 0.53
CNIH4-204ENST00000366860 FSTL1Q12841 308 aa18.34■□□□□ 0.53
CNIH4-204ENST00000366860 RAB3GAP1Q15042 981 aa18.34■□□□□ 0.53
CNIH4-204ENST00000366860 NFXL1Q6ZNB6 911 aa18.34■□□□□ 0.53
CNIH4-204ENST00000366860 HSCBQ8IWL3 235 aa18.34■□□□□ 0.53
CNIH4-204ENST00000366860 IGDCC4Q8TDY8 1250 aa18.34■□□□□ 0.53
CNIH4-204ENST00000366860 ANKS1AQ92625 1134 aa18.34■□□□□ 0.53
CNIH4-204ENST00000366860 BRF1Q92994 677 aa18.34■□□□□ 0.53
CNIH4-204ENST00000366860 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.34■□□□□ 0.53
CNIH4-204ENST00000366860 LRRC2Q9BYS8 371 aa18.34■□□□□ 0.53
CNIH4-204ENST00000366860 AS3MTQ9HBK9 375 aa18.34■□□□□ 0.53
CNIH4-204ENST00000366860 ARHGEF10LQ9HCE6 1279 aa18.34■□□□□ 0.53
CNIH4-204ENST00000366860 GBA2Q9HCG7 927 aaPredicted RBP18.34■□□□□ 0.53
CNIH4-204ENST00000366860 PASKQ96RG2 1323 aa18.33■□□□□ 0.53
CNIH4-204ENST00000366860 TOP1P11387 765 aaKnown RBP18.33■□□□□ 0.52
CNIH4-204ENST00000366860 RCAN1P53805 252 aa18.33■□□□□ 0.52
CNIH4-204ENST00000366860 PRKG1Q13976 671 aa18.33■□□□□ 0.52
CNIH4-204ENST00000366860 COL9A3Q14050 684 aaPredicted RBP18.33■□□□□ 0.52
CNIH4-204ENST00000366860 RRP1BQ14684 758 aaKnown RBP18.33■□□□□ 0.52
CNIH4-204ENST00000366860 SEPT2Q15019 361 aa18.33■□□□□ 0.52
CNIH4-204ENST00000366860 DLK2Q6UY11 383 aa18.33■□□□□ 0.52
CNIH4-204ENST00000366860 C2orf69Q8N8R5 385 aa18.33■□□□□ 0.52
CNIH4-204ENST00000366860 NKX2-3Q8TAU0 364 aa18.33■□□□□ 0.52
CNIH4-204ENST00000366860 SNX21Q969T3 373 aa18.33■□□□□ 0.52
CNIH4-204ENST00000366860 KAT14Q9H8E8 782 aa18.33■□□□□ 0.52
CNIH4-204ENST00000366860 IL17RBQ9NRM6 502 aa18.33■□□□□ 0.52
CNIH4-204ENST00000366860 NYAP2Q9P242 653 aa18.33■□□□□ 0.52
CNIH4-204ENST00000366860 NMT2O60551 498 aa18.32■□□□□ 0.52
CNIH4-204ENST00000366860 DDAH1O94760 285 aa18.32■□□□□ 0.52
CNIH4-204ENST00000366860 GUCY1A2P33402 732 aa18.32■□□□□ 0.52
CNIH4-204ENST00000366860 TOB2Q14106 344 aaPredicted RBP18.32■□□□□ 0.52
CNIH4-204ENST00000366860 VGLL4Q14135 290 aa18.32■□□□□ 0.52
CNIH4-204ENST00000366860 SYNE3Q6ZMZ3 975 aa18.32■□□□□ 0.52
CNIH4-204ENST00000366860 SLC12A7Q9Y666 1083 aa18.32■□□□□ 0.52
CNIH4-204ENST00000366860 NID2Q14112 1375 aa18.31■□□□□ 0.52
CNIH4-204ENST00000366860 USP17L5A8MUK1 530 aa18.31■□□□□ 0.52
CNIH4-204ENST00000366860 CALM1P0DP23 149 aa18.31■□□□□ 0.52
CNIH4-204ENST00000366860 CALM2P0DP24 149 aa18.31■□□□□ 0.52
CNIH4-204ENST00000366860 CALM3P0DP25 149 aa18.31■□□□□ 0.52
CNIH4-204ENST00000366860 EVCP57679 992 aa18.31■□□□□ 0.52
CNIH4-204ENST00000366860 BECN1Q14457 450 aa18.31■□□□□ 0.52
CNIH4-204ENST00000366860 RCSD1Q6JBY9 416 aa18.31■□□□□ 0.52
CNIH4-204ENST00000366860 CATIPQ7Z7H3 387 aa18.31■□□□□ 0.52
CNIH4-204ENST00000366860 ZKSCAN4Q969J2 545 aaPredicted RBP18.31■□□□□ 0.52
CNIH4-204ENST00000366860 ZSCAN31Q96LW9 406 aaPredicted RBP18.31■□□□□ 0.52
CNIH4-204ENST00000366860 SH2B1Q9NRF2 756 aaPredicted RBP18.31■□□□□ 0.52
CNIH4-204ENST00000366860 LIMCH1Q9UPQ0 1083 aa18.31■□□□□ 0.52
CNIH4-204ENST00000366860 SNCAIPQ9Y6H5 919 aa18.31■□□□□ 0.52
CNIH4-204ENST00000366860 LOC285556D6RIA3 1793 aa18.31■□□□□ 0.52
CNIH4-204ENST00000366860 KLF18A0A0U1RQI7 1052 aa18.3■□□□□ 0.52
CNIH4-204ENST00000366860 GOLGA8BA8MQT2 603 aa18.3■□□□□ 0.52
CNIH4-204ENST00000366860 APOA5Q6Q788 366 aa18.3■□□□□ 0.52
CNIH4-204ENST00000366860 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.3■□□□□ 0.52
CNIH4-204ENST00000366860 ZNF654Q8IZM8 581 aa18.3■□□□□ 0.52
CNIH4-204ENST00000366860 PNMA1Q8ND90 353 aa18.3■□□□□ 0.52
CNIH4-204ENST00000366860 CHMP4CQ96CF2 233 aa18.3■□□□□ 0.52
CNIH4-204ENST00000366860 FEZ1Q99689 392 aa18.3■□□□□ 0.52
CNIH4-204ENST00000366860 FZD1Q9UP38 647 aa18.3■□□□□ 0.52
CNIH4-204ENST00000366860 EEF2P13639 858 aaKnown RBP18.29■□□□□ 0.52
CNIH4-204ENST00000366860 PTPRAP18433 802 aa18.29■□□□□ 0.52
CNIH4-204ENST00000366860 JAG1P78504 1218 aa18.29■□□□□ 0.52
CNIH4-204ENST00000366860 ATP2B2Q01814 1243 aa18.29■□□□□ 0.52
CNIH4-204ENST00000366860 APOBRQ0VD83 1088 aa18.29■□□□□ 0.52
CNIH4-204ENST00000366860 SHROOM1Q2M3G4 852 aaPredicted RBP18.29■□□□□ 0.52
CNIH4-204ENST00000366860 LDLRAD1Q5T700 205 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 282.9 ms