RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 CAMTA1Q9Y6Y1 1673 aa10.7□□□□□ -0.7
YBX3-204ENST00000366290 SPATA31A5Q5VU36 1347 aa10.7□□□□□ -0.7
YBX3-204ENST00000366290 SPATA31A7Q8IWB4 1347 aa10.7□□□□□ -0.7
YBX3-204ENST00000366290 GNB5O14775 395 aa10.7□□□□□ -0.7
YBX3-204ENST00000366290 PLA2G4EQ3MJ16 856 aa10.7□□□□□ -0.7
YBX3-204ENST00000366290 NUTM2GQ5VZR2 741 aa10.7□□□□□ -0.7
YBX3-204ENST00000366290 SV2BQ7L1I2 683 aa10.7□□□□□ -0.7
YBX3-204ENST00000366290 IL22RA1Q8N6P7 574 aa10.7□□□□□ -0.7
YBX3-204ENST00000366290 GPN3Q9UHW5 284 aaPredicted RBP10.7□□□□□ -0.7
YBX3-204ENST00000366290 ABCC6O95255 1503 aa10.69□□□□□ -0.7
YBX3-204ENST00000366290 EDC4Q6P2E9 1401 aaKnown RBP10.69□□□□□ -0.7
YBX3-204ENST00000366290 A0A1W2PP64 1363 aa10.69□□□□□ -0.7
YBX3-204ENST00000366290 AATKQ6ZMQ8 1374 aa10.69□□□□□ -0.7
YBX3-204ENST00000366290 ZEB1P37275 1124 aaPredicted RBP10.69□□□□□ -0.7
YBX3-204ENST00000366290 BAG6P46379 1132 aa10.69□□□□□ -0.7
YBX3-204ENST00000366290 CABP4P57796 275 aa10.69□□□□□ -0.7
YBX3-204ENST00000366290 ERMP1Q7Z2K6 904 aa10.69□□□□□ -0.7
YBX3-204ENST00000366290 NECAB3Q96P71 396 aaPredicted RBP10.69□□□□□ -0.7
YBX3-204ENST00000366290 SLC12A5Q9H2X9 1139 aa10.69□□□□□ -0.7
YBX3-204ENST00000366290 TERF2IPQ9NYB0 399 aa10.69□□□□□ -0.7
YBX3-204ENST00000366290 THSD7AQ9UPZ6 1657 aa10.69□□□□□ -0.7
YBX3-204ENST00000366290 NFAT5O94916 1531 aa10.68□□□□□ -0.7
YBX3-204ENST00000366290 ENC1O14682 589 aa10.68□□□□□ -0.7
YBX3-204ENST00000366290 CELA3AP09093 270 aa10.68□□□□□ -0.7
YBX3-204ENST00000366290 HSPA5P11021 654 aaKnown RBP10.68□□□□□ -0.7
YBX3-204ENST00000366290 ESRRAP11474 423 aaPredicted RBP10.68□□□□□ -0.7
YBX3-204ENST00000366290 ZNF157P51786 506 aaPredicted RBP10.68□□□□□ -0.7
YBX3-204ENST00000366290 ZC3H6P61129 1189 aaKnown RBP10.68□□□□□ -0.7
YBX3-204ENST00000366290 TMF1P82094 1093 aa10.68□□□□□ -0.7
YBX3-204ENST00000366290 IKBKEQ14164 716 aa10.68□□□□□ -0.7
YBX3-204ENST00000366290 ZNF423Q2M1K9 1284 aa10.68□□□□□ -0.7
YBX3-204ENST00000366290 ZNF394Q53GI3 561 aa10.68□□□□□ -0.7
YBX3-204ENST00000366290 GPAT2Q6NUI2 795 aa10.68□□□□□ -0.7
YBX3-204ENST00000366290 TRIM56Q9BRZ2 755 aaKnown RBP10.68□□□□□ -0.7
YBX3-204ENST00000366290 PRDM6Q9NQX0 595 aa10.68□□□□□ -0.7
YBX3-204ENST00000366290 SPATA31A1Q5TZJ5 1347 aa10.67□□□□□ -0.7
YBX3-204ENST00000366290 H3BRJ5 948 aa10.67□□□□□ -0.7
YBX3-204ENST00000366290 B3GALT4O96024 378 aa10.67□□□□□ -0.7
YBX3-204ENST00000366290 CDC25BP30305 580 aa10.67□□□□□ -0.7
YBX3-204ENST00000366290 CHRNA2Q15822 529 aa10.67□□□□□ -0.7
YBX3-204ENST00000366290 HDGFL2Q7Z4V5 671 aaPredicted RBP10.67□□□□□ -0.7
YBX3-204ENST00000366290 USP48Q86UV5 1035 aa10.67□□□□□ -0.7
YBX3-204ENST00000366290 KCNH5Q8NCM2 988 aa10.67□□□□□ -0.7
YBX3-204ENST00000366290 TGIF2Q9GZN2 237 aa10.67□□□□□ -0.7
YBX3-204ENST00000366290 COPRSQ9NQ92 184 aa10.67□□□□□ -0.7
YBX3-204ENST00000366290 TMEM39AQ9NV64 488 aa10.67□□□□□ -0.7
YBX3-204ENST00000366290 PPME1Q9Y570 386 aa10.67□□□□□ -0.7
YBX3-204ENST00000366290 PCDHGB7Q9Y5F8 929 aa10.67□□□□□ -0.7
YBX3-204ENST00000366290 COL5A2P05997 1499 aaPredicted RBP10.67□□□□□ -0.7
YBX3-204ENST00000366290 KRBA1A5PL33 1030 aa10.66□□□□□ -0.7
YBX3-204ENST00000366290 MAP3K11Q16584 847 aa10.66□□□□□ -0.7
YBX3-204ENST00000366290 ARHGEF25Q86VW2 580 aa10.66□□□□□ -0.7
YBX3-204ENST00000366290 WFDC8Q8IUA0 241 aa10.66□□□□□ -0.7
YBX3-204ENST00000366290 TRIM11Q96F44 468 aa10.66□□□□□ -0.7
YBX3-204ENST00000366290 KBTBD4Q9NVX7 518 aa10.66□□□□□ -0.7
YBX3-204ENST00000366290 DDX41Q9UJV9 622 aaKnown RBP10.66□□□□□ -0.7
YBX3-204ENST00000366290 OVOS2A0A0J9YW53 1432 aa10.66□□□□□ -0.7
YBX3-204ENST00000366290 OVOS2Q6IE36 1432 aa10.66□□□□□ -0.7
YBX3-204ENST00000366290 LRP5O75197 1615 aa10.66□□□□□ -0.7
YBX3-204ENST00000366290 ANKRD36BQ8N2N9 1353 aa10.65□□□□□ -0.7
YBX3-204ENST00000366290 PPP2R3AQ06190 1150 aa10.65□□□□□ -0.7
YBX3-204ENST00000366290 MSL1Q68DK7 614 aa10.65□□□□□ -0.7
YBX3-204ENST00000366290 TXNDC11Q6PKC3 985 aa10.65□□□□□ -0.7
YBX3-204ENST00000366290 ALYREFQ86V81 257 aaKnown RBP10.65□□□□□ -0.7
YBX3-204ENST00000366290 RSRP1Q9BUV0 290 aa10.65□□□□□ -0.7
YBX3-204ENST00000366290 MYOM1P52179 1685 aa10.65□□□□□ -0.7
YBX3-204ENST00000366290 LINC01387J3KSC0 135 aa10.64□□□□□ -0.71
YBX3-204ENST00000366290 SOX1O00570 391 aaPredicted RBP10.64□□□□□ -0.71
YBX3-204ENST00000366290 PAGE1O75459 146 aa10.64□□□□□ -0.71
YBX3-204ENST00000366290 IGHA1P01876 353 aa10.64□□□□□ -0.71
YBX3-204ENST00000366290 RLBP1P12271 317 aa10.64□□□□□ -0.71
YBX3-204ENST00000366290 RACK1P63244 317 aaKnown RBP10.64□□□□□ -0.71
YBX3-204ENST00000366290 COL9A3Q14050 684 aaPredicted RBP10.64□□□□□ -0.71
YBX3-204ENST00000366290 CCSER2Q9H7U1 834 aa10.64□□□□□ -0.71
YBX3-204ENST00000366290 SRA1Q9HD15 236 aaKnown RBP10.64□□□□□ -0.71
YBX3-204ENST00000366290 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.64□□□□□ -0.71
YBX3-204ENST00000366290 LTN1O94822 1766 aa10.63□□□□□ -0.71
YBX3-204ENST00000366290 RGPD5Q99666 1765 aa10.63□□□□□ -0.71
YBX3-204ENST00000366290 F6X3S4 739 aa10.63□□□□□ -0.71
YBX3-204ENST00000366290 PIK3R2O00459 728 aa10.63□□□□□ -0.71
YBX3-204ENST00000366290 NID1P14543 1247 aa10.63□□□□□ -0.71
YBX3-204ENST00000366290 LIG3P49916 1009 aa10.63□□□□□ -0.71
YBX3-204ENST00000366290 PWP1Q13610 501 aa10.63□□□□□ -0.71
YBX3-204ENST00000366290 FAM117BQ6P1L5 589 aa10.63□□□□□ -0.71
YBX3-204ENST00000366290 NME9Q86XW9 330 aa10.63□□□□□ -0.71
YBX3-204ENST00000366290 RELL1Q8IUW5 271 aa10.63□□□□□ -0.71
YBX3-204ENST00000366290 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.63□□□□□ -0.71
YBX3-204ENST00000366290 ZNF654Q8IZM8 581 aa10.63□□□□□ -0.71
YBX3-204ENST00000366290 SLC7A3Q8WY07 619 aa10.63□□□□□ -0.71
YBX3-204ENST00000366290 THRAP3Q9Y2W1 955 aaKnown RBP10.63□□□□□ -0.71
YBX3-204ENST00000366290 CRB1P82279 1406 aa10.63□□□□□ -0.71
YBX3-204ENST00000366290 TNS1Q9HBL0 1735 aaKnown RBP10.63□□□□□ -0.71
YBX3-204ENST00000366290 PARP4Q9UKK3 1724 aaKnown RBP10.62□□□□□ -0.71
YBX3-204ENST00000366290 DISP2A7MBM2 1401 aa10.62□□□□□ -0.71
YBX3-204ENST00000366290 PROCP04070 461 aa10.62□□□□□ -0.71
YBX3-204ENST00000366290 EVA1CP58658 441 aa10.62□□□□□ -0.71
YBX3-204ENST00000366290 EZH2Q15910 746 aaKnown RBP10.62□□□□□ -0.71
YBX3-204ENST00000366290 HGSNATQ68CP4 663 aa10.62□□□□□ -0.71
YBX3-204ENST00000366290 TMEM74Q96NL1 305 aa10.62□□□□□ -0.71
YBX3-204ENST00000366290 CAMKK2Q96RR4 588 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms