RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 ADH5P11766 374 aa7.59□□□□□ -1.19
RNU4-4P-201ENST00000364588 BMP3P12645 472 aa7.59□□□□□ -1.19
RNU4-4P-201ENST00000364588 FAAP100Q0VG06 881 aa7.59□□□□□ -1.19
RNU4-4P-201ENST00000364588 PDE3AQ14432 1141 aa7.59□□□□□ -1.19
RNU4-4P-201ENST00000364588 PRAM1Q96QH2 718 aa7.59□□□□□ -1.19
RNU4-4P-201ENST00000364588 KCNF1Q9H3M0 494 aa7.59□□□□□ -1.19
RNU4-4P-201ENST00000364588 C14orf93Q9H972 538 aaKnown RBP7.59□□□□□ -1.19
RNU4-4P-201ENST00000364588 DHX57Q6P158 1386 aaKnown RBP7.59□□□□□ -1.2
RNU4-4P-201ENST00000364588 SLIT2O94813 1529 aa7.58□□□□□ -1.2
RNU4-4P-201ENST00000364588 PLCH1Q4KWH8 1693 aa7.58□□□□□ -1.2
RNU4-4P-201ENST00000364588 RALGAPBQ86X10 1494 aa7.58□□□□□ -1.2
RNU4-4P-201ENST00000364588 PRPF40AO75400 957 aaKnown RBP7.58□□□□□ -1.2
RNU4-4P-201ENST00000364588 DLGAP3O95886 979 aa7.58□□□□□ -1.2
RNU4-4P-201ENST00000364588 CLEC10AQ8IUN9 316 aa7.58□□□□□ -1.2
RNU4-4P-201ENST00000364588 UNC5CLQ8IV45 518 aa7.58□□□□□ -1.2
RNU4-4P-201ENST00000364588 CEP44Q9C0F1 390 aa7.58□□□□□ -1.2
RNU4-4P-201ENST00000364588 C7orf69Q9H7B7 122 aa7.58□□□□□ -1.2
RNU4-4P-201ENST00000364588 RAD18Q9NS91 495 aa7.58□□□□□ -1.2
RNU4-4P-201ENST00000364588 FAM8A1Q9UBU6 413 aa7.58□□□□□ -1.2
RNU4-4P-201ENST00000364588 AKAP2Q9Y2D5 859 aa7.58□□□□□ -1.2
RNU4-4P-201ENST00000364588 TNS3Q68CZ2 1445 aa7.58□□□□□ -1.2
RNU4-4P-201ENST00000364588 ABCA3Q99758 1704 aa7.58□□□□□ -1.2
RNU4-4P-201ENST00000364588 SYNGAP1Q96PV0 1343 aa7.57□□□□□ -1.2
RNU4-4P-201ENST00000364588 NRXN1Q9ULB1 1477 aa7.57□□□□□ -1.2
RNU4-4P-201ENST00000364588 SCO2A0A1W2PP80 73 aa7.57□□□□□ -1.2
RNU4-4P-201ENST00000364588 ANKRD33BA6NCL7 494 aa7.57□□□□□ -1.2
RNU4-4P-201ENST00000364588 IGLV1-40P01703 118 aa7.57□□□□□ -1.2
RNU4-4P-201ENST00000364588 BEND4Q6ZU67 534 aa7.57□□□□□ -1.2
RNU4-4P-201ENST00000364588 C3orf58Q8NDZ4 430 aa7.57□□□□□ -1.2
RNU4-4P-201ENST00000364588 PMFBP1Q8TBY8 1022 aa7.57□□□□□ -1.2
RNU4-4P-201ENST00000364588 DBNDD2Q9BQY9 259 aa7.57□□□□□ -1.2
RNU4-4P-201ENST00000364588 C12orf49Q9H741 205 aa7.57□□□□□ -1.2
RNU4-4P-201ENST00000364588 POGKQ9P215 609 aa7.57□□□□□ -1.2
RNU4-4P-201ENST00000364588 MAP4P27816 1152 aaKnown RBP7.56□□□□□ -1.2
RNU4-4P-201ENST00000364588 GNA15P30679 374 aa7.56□□□□□ -1.2
RNU4-4P-201ENST00000364588 USP11P51784 963 aa7.56□□□□□ -1.2
RNU4-4P-201ENST00000364588 SOX4Q06945 474 aaPredicted RBP7.56□□□□□ -1.2
RNU4-4P-201ENST00000364588 EAPPQ56P03 285 aaPredicted RBP7.56□□□□□ -1.2
RNU4-4P-201ENST00000364588 C2CD4AQ8NCU7 369 aaPredicted RBP7.56□□□□□ -1.2
RNU4-4P-201ENST00000364588 ANKRD24Q8TF21 1146 aa7.56□□□□□ -1.2
RNU4-4P-201ENST00000364588 FAM83CQ9BQN1 747 aa7.56□□□□□ -1.2
RNU4-4P-201ENST00000364588 HIRIP3Q9BW71 556 aaPredicted RBP7.56□□□□□ -1.2
RNU4-4P-201ENST00000364588 KRT82Q9NSB4 513 aa7.56□□□□□ -1.2
RNU4-4P-201ENST00000364588 RNF112Q9ULX5 631 aa7.56□□□□□ -1.2
RNU4-4P-201ENST00000364588 AP4E1Q9UPM8 1137 aa7.56□□□□□ -1.2
RNU4-4P-201ENST00000364588 CCDC9Q9Y3X0 531 aaKnown RBP7.56□□□□□ -1.2
RNU4-4P-201ENST00000364588 SAMM50Q9Y512 469 aa7.56□□□□□ -1.2
RNU4-4P-201ENST00000364588 RAB3GAP2Q9H2M9 1393 aa7.56□□□□□ -1.2
RNU4-4P-201ENST00000364588 NWD2Q9ULI1 1742 aa7.55□□□□□ -1.2
RNU4-4P-201ENST00000364588 SRCAPQ6ZRS2 3230 aa7.55□□□□□ -1.2
RNU4-4P-201ENST00000364588 LOC100996750A0A140TA64 210 aa7.55□□□□□ -1.2
RNU4-4P-201ENST00000364588 CTSBP07858 339 aa7.55□□□□□ -1.2
RNU4-4P-201ENST00000364588 GSTP1P09211 210 aaKnown RBP7.55□□□□□ -1.2
RNU4-4P-201ENST00000364588 ERCC3P19447 782 aa7.55□□□□□ -1.2
RNU4-4P-201ENST00000364588 NFIAQ12857 509 aa7.55□□□□□ -1.2
RNU4-4P-201ENST00000364588 CCDC27Q2M243 656 aa7.55□□□□□ -1.2
RNU4-4P-201ENST00000364588 SGO2Q562F6 1265 aa7.55□□□□□ -1.2
RNU4-4P-201ENST00000364588 AKAP4Q5JQC9 854 aa7.55□□□□□ -1.2
RNU4-4P-201ENST00000364588 RNF43Q68DV7 783 aa7.55□□□□□ -1.2
RNU4-4P-201ENST00000364588 DEFB132Q7Z7B7 95 aa7.55□□□□□ -1.2
RNU4-4P-201ENST00000364588 SULF2Q8IWU5 870 aa7.55□□□□□ -1.2
RNU4-4P-201ENST00000364588 TRIM42Q8IWZ5 723 aa7.55□□□□□ -1.2
RNU4-4P-201ENST00000364588 SETDB2Q96T68 719 aa7.55□□□□□ -1.2
RNU4-4P-201ENST00000364588 EMILIN2Q9BXX0 1053 aa7.55□□□□□ -1.2
RNU4-4P-201ENST00000364588 KRTAP4-6Q9BYQ5 205 aa7.55□□□□□ -1.2
RNU4-4P-201ENST00000364588 WWC3Q9ULE0 1092 aa7.55□□□□□ -1.2
RNU4-4P-201ENST00000364588 DLC1Q96QB1 1528 aa7.55□□□□□ -1.2
RNU4-4P-201ENST00000364588 SBNO1A3KN83 1393 aa7.55□□□□□ -1.2
RNU4-4P-201ENST00000364588 TRPM3Q9HCF6 1732 aaPredicted RBP7.55□□□□□ -1.2
RNU4-4P-201ENST00000364588 ADGRB1O14514 1584 aa7.54□□□□□ -1.2
RNU4-4P-201ENST00000364588 ADGRB2O60241 1585 aa7.54□□□□□ -1.2
RNU4-4P-201ENST00000364588 BLMP54132 1417 aaPredicted RBP7.54□□□□□ -1.2
RNU4-4P-201ENST00000364588 HMX2A2RU54 273 aa7.54□□□□□ -1.2
RNU4-4P-201ENST00000364588 FAM83GA6ND36 823 aa7.54□□□□□ -1.2
RNU4-4P-201ENST00000364588 ECEL1O95672 775 aa7.54□□□□□ -1.2
RNU4-4P-201ENST00000364588 ZNF157P51786 506 aaPredicted RBP7.54□□□□□ -1.2
RNU4-4P-201ENST00000364588 LRP8Q14114 963 aa7.54□□□□□ -1.2
RNU4-4P-201ENST00000364588 VPS72Q15906 364 aa7.54□□□□□ -1.2
RNU4-4P-201ENST00000364588 GIMAP7Q8NHV1 300 aa7.54□□□□□ -1.2
RNU4-4P-201ENST00000364588 WDR18Q9BV38 432 aa7.54□□□□□ -1.2
RNU4-4P-201ENST00000364588 OSBPL7Q9BZF2 842 aa7.54□□□□□ -1.2
RNU4-4P-201ENST00000364588 ARHGEF10O15013 1369 aa7.54□□□□□ -1.2
RNU4-4P-201ENST00000364588 PRR36Q9H6K5 1346 aa7.53□□□□□ -1.2
RNU4-4P-201ENST00000364588 ANKARQ7Z5J8 1434 aa7.53□□□□□ -1.2
RNU4-4P-201ENST00000364588 NRAPQ86VF7 1730 aa7.53□□□□□ -1.2
RNU4-4P-201ENST00000364588 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.53□□□□□ -1.2
RNU4-4P-201ENST00000364588 AOC2O75106 756 aa7.53□□□□□ -1.2
RNU4-4P-201ENST00000364588 USP17L7P0C7H9 530 aa7.53□□□□□ -1.2
RNU4-4P-201ENST00000364588 DRD2P14416 443 aa7.53□□□□□ -1.2
RNU4-4P-201ENST00000364588 NME2P22392 152 aa7.53□□□□□ -1.2
RNU4-4P-201ENST00000364588 EIF4BP23588 611 aaKnown RBP7.53□□□□□ -1.2
RNU4-4P-201ENST00000364588 PAOXQ6QHF9 649 aa7.53□□□□□ -1.2
RNU4-4P-201ENST00000364588 NPAS4Q8IUM7 802 aa7.53□□□□□ -1.2
RNU4-4P-201ENST00000364588 Q8N3U1 123 aa7.53□□□□□ -1.2
RNU4-4P-201ENST00000364588 ACTL7BQ9Y614 415 aa7.53□□□□□ -1.2
RNU4-4P-201ENST00000364588 ALS2Q96Q42 1657 aa7.53□□□□□ -1.2
RNU4-4P-201ENST00000364588 GPRASP1Q5JY77 1395 aa7.52□□□□□ -1.21
RNU4-4P-201ENST00000364588 FAM95CA0A1B0GW59 222 aa7.52□□□□□ -1.21
RNU4-4P-201ENST00000364588 SLFN14P0C7P3 912 aa7.52□□□□□ -1.21
RNU4-4P-201ENST00000364588 MAP7Q14244 749 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms