RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 MAGEA1P43355 309 aa15.59■□□□□ 0.09
COL6A1-201ENST00000361866 LIG3P49916 1009 aa15.59■□□□□ 0.09
COL6A1-201ENST00000361866 ATP1A2P50993 1020 aa15.59■□□□□ 0.09
COL6A1-201ENST00000361866 LPIN2Q92539 896 aa15.59■□□□□ 0.09
COL6A1-201ENST00000361866 WDR24Q96S15 920 aa15.59■□□□□ 0.09
COL6A1-201ENST00000361866 TRAF5O00463 557 aa15.58■□□□□ 0.09
COL6A1-201ENST00000361866 MORC3Q14149 939 aa15.58■□□□□ 0.09
COL6A1-201ENST00000361866 NCAPH2Q6IBW4 605 aa15.58■□□□□ 0.09
COL6A1-201ENST00000361866 ZSWIM5Q9P217 1185 aa15.58■□□□□ 0.09
COL6A1-201ENST00000361866 SH3TC1Q8TE82 1336 aa15.58■□□□□ 0.09
COL6A1-201ENST00000361866 TOM1O60784 492 aa15.58■□□□□ 0.08
COL6A1-201ENST00000361866 ATP6V1AP38606 617 aa15.58■□□□□ 0.08
COL6A1-201ENST00000361866 BCAMP50895 628 aa15.58■□□□□ 0.08
COL6A1-201ENST00000361866 MTF1Q14872 753 aa15.58■□□□□ 0.08
COL6A1-201ENST00000361866 C2CD5Q86YS7 1000 aa15.58■□□□□ 0.08
COL6A1-201ENST00000361866 AATFQ9NY61 560 aaKnown RBP eCLIP15.58■□□□□ 0.08
COL6A1-201ENST00000361866 CCDC151A5D8V7 595 aa15.58■□□□□ 0.08
COL6A1-201ENST00000361866 PPP6R2O75170 966 aa15.58■□□□□ 0.08
COL6A1-201ENST00000361866 TXKP42681 527 aa15.58■□□□□ 0.08
COL6A1-201ENST00000361866 RAD51AP2Q09MP3 1159 aa15.58■□□□□ 0.08
COL6A1-201ENST00000361866 RAPGEF1Q13905 1077 aa15.58■□□□□ 0.08
COL6A1-201ENST00000361866 SMARCC2Q8TAQ2 1214 aa15.58■□□□□ 0.08
COL6A1-201ENST00000361866 ABCB6Q9NP58 842 aa15.58■□□□□ 0.08
COL6A1-201ENST00000361866 BICDL2A1A5D9 508 aa15.57■□□□□ 0.08
COL6A1-201ENST00000361866 KIF28PB7ZC32 967 aa15.57■□□□□ 0.08
COL6A1-201ENST00000361866 CTNNBL1Q8WYA6 563 aaPredicted RBP15.57■□□□□ 0.08
COL6A1-201ENST00000361866 RRP15Q9Y3B9 282 aaKnown RBP15.57■□□□□ 0.08
COL6A1-201ENST00000361866 GSTTP1A0A1W2PQM5 241 aa15.57■□□□□ 0.08
COL6A1-201ENST00000361866 PPP1R12BO60237 982 aaPredicted RBP15.57■□□□□ 0.08
COL6A1-201ENST00000361866 SALL3Q9BXA9 1300 aa15.57■□□□□ 0.08
COL6A1-201ENST00000361866 USP17L12C9JPN9 530 aa15.57■□□□□ 0.08
COL6A1-201ENST00000361866 USP17L21D6R901 530 aa15.57■□□□□ 0.08
COL6A1-201ENST00000361866 INPP5BP32019 993 aa15.57■□□□□ 0.08
COL6A1-201ENST00000361866 CC2D1AQ6P1N0 951 aaPredicted RBP15.57■□□□□ 0.08
COL6A1-201ENST00000361866 KLHL7Q8IXQ5 586 aa15.57■□□□□ 0.08
COL6A1-201ENST00000361866 BCAS4Q8TDM0 211 aa15.57■□□□□ 0.08
COL6A1-201ENST00000361866 ACTN2P35609 894 aa15.57■□□□□ 0.08
COL6A1-201ENST00000361866 TRIM14Q14142 442 aa15.57■□□□□ 0.08
COL6A1-201ENST00000361866 GOLGA5Q8TBA6 731 aa15.57■□□□□ 0.08
COL6A1-201ENST00000361866 FERMT2Q96AC1 680 aa15.57■□□□□ 0.08
COL6A1-201ENST00000361866 CCDC114Q96M63 670 aa15.57■□□□□ 0.08
COL6A1-201ENST00000361866 TRIM31Q9BZY9 425 aa15.57■□□□□ 0.08
COL6A1-201ENST00000361866 TSPOAP1O95153 1857 aa15.56■□□□□ 0.08
COL6A1-201ENST00000361866 CEP152O94986 1710 aa15.56■□□□□ 0.08
COL6A1-201ENST00000361866 F8W031 263 aaPredicted RBP15.56■□□□□ 0.08
COL6A1-201ENST00000361866 WHAMMP3Q1A5X7 153 aa15.56■□□□□ 0.08
COL6A1-201ENST00000361866 KCTD16Q68DU8 428 aa15.56■□□□□ 0.08
COL6A1-201ENST00000361866 SYNE4Q8N205 404 aa15.56■□□□□ 0.08
COL6A1-201ENST00000361866 SCLT1Q96NL6 688 aa15.56■□□□□ 0.08
COL6A1-201ENST00000361866 TBC1D7Q9P0N9 293 aa15.56■□□□□ 0.08
COL6A1-201ENST00000361866 PRDM4Q9UKN5 801 aa15.56■□□□□ 0.08
COL6A1-201ENST00000361866 PDE8AO60658 829 aa15.56■□□□□ 0.08
COL6A1-201ENST00000361866 BAG3O95817 575 aa15.56■□□□□ 0.08
COL6A1-201ENST00000361866 CCT5P48643 541 aa15.56■□□□□ 0.08
COL6A1-201ENST00000361866 GUCY2FP51841 1108 aa15.56■□□□□ 0.08
COL6A1-201ENST00000361866 PPARAQ07869 468 aa15.56■□□□□ 0.08
COL6A1-201ENST00000361866 TUBB2AQ13885 445 aa15.56■□□□□ 0.08
COL6A1-201ENST00000361866 KRT79Q5XKE5 535 aa15.56■□□□□ 0.08
COL6A1-201ENST00000361866 CPLX4Q7Z7G2 160 aa15.56■□□□□ 0.08
COL6A1-201ENST00000361866 TUBB2BQ9BVA1 445 aa15.56■□□□□ 0.08
COL6A1-201ENST00000361866 IFIH1Q9BYX4 1025 aaKnown RBP15.56■□□□□ 0.08
COL6A1-201ENST00000361866 TEX33O43247 280 aa15.55■□□□□ 0.08
COL6A1-201ENST00000361866 RRAGAQ7L523 313 aa15.55■□□□□ 0.08
COL6A1-201ENST00000361866 FCHSD1Q86WN1 690 aa15.55■□□□□ 0.08
COL6A1-201ENST00000361866 AXIN2Q9Y2T1 843 aa15.55■□□□□ 0.08
COL6A1-201ENST00000361866 GNAQP50148 359 aa15.55■□□□□ 0.08
COL6A1-201ENST00000361866 ST3GAL1Q11201 340 aa15.55■□□□□ 0.08
COL6A1-201ENST00000361866 SEPT7Q16181 437 aaKnown RBP15.55■□□□□ 0.08
COL6A1-201ENST00000361866 CRACR2BQ8N4Y2 399 aaPredicted RBP15.55■□□□□ 0.08
COL6A1-201ENST00000361866 ENOX1Q8TC92 643 aaKnown RBP15.55■□□□□ 0.08
COL6A1-201ENST00000361866 RASGRP4Q8TDF6 673 aa15.55■□□□□ 0.08
COL6A1-201ENST00000361866 PPM1EQ8WY54 764 aa15.55■□□□□ 0.08
COL6A1-201ENST00000361866 C6orf229H3BNL8 230 aa15.55■□□□□ 0.08
COL6A1-201ENST00000361866 CCNT1O60563 726 aaKnown RBP15.55■□□□□ 0.08
COL6A1-201ENST00000361866 COPB1P53618 953 aaKnown RBP15.55■□□□□ 0.08
COL6A1-201ENST00000361866 CYP27A1Q02318 531 aa15.55■□□□□ 0.08
COL6A1-201ENST00000361866 COL9A3Q14050 684 aaPredicted RBP15.55■□□□□ 0.08
COL6A1-201ENST00000361866 CCDC121Q6ZUS5 278 aa15.55■□□□□ 0.08
COL6A1-201ENST00000361866 UBLCP1Q8WVY7 318 aaPredicted RBP15.55■□□□□ 0.08
COL6A1-201ENST00000361866 GPKOWQ92917 476 aaPredicted RBP eCLIP15.55■□□□□ 0.08
COL6A1-201ENST00000361866 TFCP2L1Q9NZI6 479 aa15.55■□□□□ 0.08
COL6A1-201ENST00000361866 SAP30BPQ9UHR5 308 aaKnown RBP15.55■□□□□ 0.08
COL6A1-201ENST00000361866 HGSO14964 777 aaPredicted RBP15.54■□□□□ 0.08
COL6A1-201ENST00000361866 TRIML1Q8N9V2 468 aa15.54■□□□□ 0.08
COL6A1-201ENST00000361866 PCDH11XQ9BZA7 1347 aa15.54■□□□□ 0.08
COL6A1-201ENST00000361866 PCDH11YQ9BZA8 1340 aa15.54■□□□□ 0.08
COL6A1-201ENST00000361866 RBM28Q9NW13 759 aaKnown RBP15.54■□□□□ 0.08
COL6A1-201ENST00000361866 SETBP1Q9Y6X0 1596 aa15.54■□□□□ 0.08
COL6A1-201ENST00000361866 PTPRMP28827 1452 aa15.54■□□□□ 0.08
COL6A1-201ENST00000361866 ANKRD62A6NC57 917 aa15.54■□□□□ 0.08
COL6A1-201ENST00000361866 CXCR5P32302 372 aa15.54■□□□□ 0.08
COL6A1-201ENST00000361866 GNGT1P63211 74 aa15.54■□□□□ 0.08
COL6A1-201ENST00000361866 ST5P78524 1137 aa15.54■□□□□ 0.08
COL6A1-201ENST00000361866 KIAA0753Q2KHM9 967 aa15.54■□□□□ 0.08
COL6A1-201ENST00000361866 SHC4Q6S5L8 630 aa15.54■□□□□ 0.08
COL6A1-201ENST00000361866 BUB1O43683 1085 aa15.54■□□□□ 0.08
COL6A1-201ENST00000361866 GYG1P46976 350 aa15.54■□□□□ 0.08
COL6A1-201ENST00000361866 EIF6P56537 245 aaKnown RBP15.54■□□□□ 0.08
COL6A1-201ENST00000361866 PICALMQ13492 652 aa15.54■□□□□ 0.08
COL6A1-201ENST00000361866 CASP8Q14790 479 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms