RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 TRIM59Q8IWR1 403 aa9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 SPZ1Q9BXG8 430 aa9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 BSPRYQ5W0U4 402 aa9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 KLHL7Q8IXQ5 586 aa9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 UPF3AQ9H1J1 476 aaKnown RBP9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 DBNLQ9UJU6 430 aaKnown RBP9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 YWHAEP62258 255 aaKnown RBP9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 CCDC169A6NNP5 214 aa9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 TMPOP42166 694 aaKnown RBP9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 PRDM11Q9NQV5 511 aa9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 APOA1P02647 267 aa9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 APBA1Q02410 837 aa9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 TRMT10CQ7L0Y3 403 aaKnown RBP9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 PAIP2BQ9ULR5 123 aaKnown RBP9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 NVLO15381 856 aaKnown RBP9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 TAF11Q15544 211 aa9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 RBM26Q5T8P6 1007 aaKnown RBP9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 SPDYE16A6NNV3 312 aaPredicted RBP9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 SPDYE2Q495Y8 402 aa9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 BRF1Q92994 677 aa9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 SLC13A4Q9UKG4 626 aa9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 HP1BP3Q5SSJ5 553 aaPredicted RBP9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 TSC1Q92574 1164 aa9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 CARD6Q9BX69 1037 aa9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 STRN3Q13033 797 aa9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 IFT122Q9HBG6 1241 aa9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 WWC3Q9ULE0 1092 aa9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 C11orf95C9JLR9 678 aaPredicted RBP9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 P4HA1P13674 534 aa9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 CACTINQ8WUQ7 758 aaKnown RBP9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 CDKL2Q92772 493 aa9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 SKA2Q8WVK7 121 aaPredicted RBP9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 TUBB6Q9BUF5 446 aa9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 RUNDC3BQ96NL0 473 aa9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 SUCLA2Q9P2R7 463 aaPredicted RBP9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 HFM1A2PYH4 1435 aa9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 SERPINB10P48595 397 aa9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 PAK1Q13153 545 aa9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 SERPINI1Q99574 410 aa9.24□□□□□ -0.93
NCKAP1-202ENST00000361354 MAP3K10Q02779 954 aa9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 GFM2Q969S9 779 aaKnown RBP9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 DACH2Q96NX9 599 aa9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 ATG16L1Q676U5 607 aa9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 TOP2AP11388 1531 aaKnown RBP9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 DAB2P98082 770 aa9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 SFMBT2Q5VUG0 894 aa9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 GNL1P36915 607 aaPredicted RBP9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 PMS1P54277 932 aaKnown RBP9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 ATP6V0A4Q9HBG4 840 aa9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 GNAT2P19087 354 aa9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 CARSP49589 748 aaKnown RBP9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 FGFR1OP2Q9NVK5 253 aa9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 UQCRFS1P1P0C7P4 283 aa9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 CCDC84Q86UT8 332 aaPredicted RBP9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 RMDN2Q96LZ7 410 aa9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 GSDMAQ96QA5 445 aa9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 TRMT112Q9UI30 125 aaKnown RBP9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 HLA-DPA1P20036 260 aa9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 GUCY2FP51841 1108 aa9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 HDAC4P56524 1084 aa9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 C6orf118Q5T5N4 469 aa9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 JPH2Q9BR39 696 aaPredicted RBP9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 H0YC42 278 aa9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 BACH1O14867 736 aa9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 ZSCAN32Q9NX65 697 aa9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 HECW1Q76N89 1606 aa9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 ECE1P42892 770 aa9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 PRAM1Q96QH2 718 aa9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 AMFRQ9UKV5 643 aa9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 FBXL13Q8NEE6 735 aa9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 CNOT10Q9H9A5 744 aaKnown RBP9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 TEX9Q8N6V9 391 aa9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 CAPN11Q9UMQ6 739 aa9.23□□□□□ -0.93
NCKAP1-202ENST00000361354 WIZO95785 1651 aa9.22□□□□□ -0.93
NCKAP1-202ENST00000361354 KIF1CO43896 1103 aaKnown RBP9.22□□□□□ -0.93
NCKAP1-202ENST00000361354 SF3A3Q12874 501 aaKnown RBP eCLIP9.22□□□□□ -0.933e-7■■■■□ 23.5
NCKAP1-202ENST00000361354 FBXO2Q9UK22 296 aaPredicted RBP9.22□□□□□ -0.93
NCKAP1-202ENST00000361354 RRP15Q9Y3B9 282 aaKnown RBP9.22□□□□□ -0.93
NCKAP1-202ENST00000361354 C6orf229H3BNL8 230 aa9.22□□□□□ -0.93
NCKAP1-202ENST00000361354 TTI1O43156 1089 aa9.22□□□□□ -0.93
NCKAP1-202ENST00000361354 TRPC1P48995 793 aa9.22□□□□□ -0.93
NCKAP1-202ENST00000361354 ATP1A2P50993 1020 aa9.22□□□□□ -0.93
NCKAP1-202ENST00000361354 TRIM50Q86XT4 487 aa9.22□□□□□ -0.93
NCKAP1-202ENST00000361354 TRIML1Q8N9V2 468 aa9.22□□□□□ -0.93
NCKAP1-202ENST00000361354 NUTM2BA6NNL0 878 aaPredicted RBP9.22□□□□□ -0.93
NCKAP1-202ENST00000361354 NUTM2EB1AL46 878 aaPredicted RBP9.22□□□□□ -0.93
NCKAP1-202ENST00000361354 SNX21Q969T3 373 aa9.22□□□□□ -0.93
NCKAP1-202ENST00000361354 SH3GL2Q99962 352 aa9.22□□□□□ -0.93
NCKAP1-202ENST00000361354 BBOF1Q8ND07 529 aa9.22□□□□□ -0.93
NCKAP1-202ENST00000361354 SESN1Q9Y6P5 492 aa9.22□□□□□ -0.93
NCKAP1-202ENST00000361354 OATP04181 439 aa9.22□□□□□ -0.93
NCKAP1-202ENST00000361354 TRAIPQ9BWF2 469 aa9.22□□□□□ -0.93
NCKAP1-202ENST00000361354 HELLSQ9NRZ9 838 aa9.22□□□□□ -0.93
NCKAP1-202ENST00000361354 SLFN5Q08AF3 891 aa9.22□□□□□ -0.93
NCKAP1-202ENST00000361354 PRR23D1E9PI22 279 aaPredicted RBP9.22□□□□□ -0.93
NCKAP1-202ENST00000361354 RASGRF2O14827 1237 aa9.22□□□□□ -0.93
NCKAP1-202ENST00000361354 PRR23D2P0DMB1 279 aaPredicted RBP9.22□□□□□ -0.93
NCKAP1-202ENST00000361354 PDZD4Q76G19 769 aaPredicted RBP9.22□□□□□ -0.93
NCKAP1-202ENST00000361354 STAM2O75886 525 aa9.22□□□□□ -0.93
NCKAP1-202ENST00000361354 KPNA2P52292 529 aaKnown RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms