RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 APBA2Q99767 749 aa25.74■■□□□ 1.71
CD47-202ENST00000361309 ANTXR1Q9H6X2 564 aa25.74■■□□□ 1.71
CD47-202ENST00000361309 CWC22Q9HCG8 908 aaKnown RBP25.74■■□□□ 1.71
CD47-202ENST00000361309 SERPINB13Q9UIV8 391 aa25.74■■□□□ 1.71
CD47-202ENST00000361309 NAV1Q8NEY1 1877 aa25.74■■□□□ 1.71
CD47-202ENST00000361309 USP17L15C9J2P7 530 aa25.73■■□□□ 1.71
CD47-202ENST00000361309 USP17L13C9JLJ4 530 aa25.73■■□□□ 1.71
CD47-202ENST00000361309 USP17L11C9JVI0 530 aa25.73■■□□□ 1.71
CD47-202ENST00000361309 USP17L18D6R9N7 530 aa25.73■■□□□ 1.71
CD47-202ENST00000361309 USP17L22D6RA61 530 aa25.73■■□□□ 1.71
CD47-202ENST00000361309 USP17L17D6RBQ6 530 aa25.73■■□□□ 1.71
CD47-202ENST00000361309 USP17L19D6RCP7 530 aa25.73■■□□□ 1.71
CD47-202ENST00000361309 USP17L20D6RJB6 530 aa25.73■■□□□ 1.71
CD47-202ENST00000361309 CNMDO75829 334 aa25.73■■□□□ 1.71
CD47-202ENST00000361309 USP17L24Q0WX57 530 aa25.73■■□□□ 1.71
CD47-202ENST00000361309 RAB3GAP1Q15042 981 aa25.73■■□□□ 1.71
CD47-202ENST00000361309 LHX8Q68G74 356 aa25.73■■□□□ 1.71
CD47-202ENST00000361309 EHD4Q9H223 541 aa25.73■■□□□ 1.71
CD47-202ENST00000361309 RABGAP1Q9Y3P9 1069 aa25.73■■□□□ 1.71
CD47-202ENST00000361309 RLBP1P12271 317 aa25.72■■□□□ 1.71
CD47-202ENST00000361309 MAP2K5Q13163 448 aa25.72■■□□□ 1.71
CD47-202ENST00000361309 CERKLQ49MI3 558 aaPredicted RBP25.72■■□□□ 1.71
CD47-202ENST00000361309 A0A0C4DFX4 3053 aa25.72■■□□□ 1.71
CD47-202ENST00000361309 COL6A1P12109 1028 aa25.71■■□□□ 1.71
CD47-202ENST00000361309 MAP3K12Q12852 859 aa25.71■■□□□ 1.71
CD47-202ENST00000361309 ABCB5Q2M3G0 1257 aa25.71■■□□□ 1.71
CD47-202ENST00000361309 CATSPERGQ6ZRH7 1159 aa25.71■■□□□ 1.71
CD47-202ENST00000361309 TTC6Q86TZ1 520 aa25.71■■□□□ 1.71
CD47-202ENST00000361309 ACER1Q8TDN7 264 aa25.71■■□□□ 1.71
CD47-202ENST00000361309 EDC3Q96F86 508 aaKnown RBP25.71■■□□□ 1.71
CD47-202ENST00000361309 USP14P54578 494 aa25.7■■□□□ 1.7
CD47-202ENST00000361309 CCNA1P78396 465 aa25.7■■□□□ 1.7
CD47-202ENST00000361309 WDR78Q5VTH9 848 aa25.7■■□□□ 1.7
CD47-202ENST00000361309 KIAA1683Q9H0B3 1180 aa25.7■■□□□ 1.7
CD47-202ENST00000361309 MYH8P13535 1937 aa25.69■■□□□ 1.7
CD47-202ENST00000361309 GLRX3O76003 335 aaKnown RBP25.69■■□□□ 1.7
CD47-202ENST00000361309 VCAM1P19320 739 aa25.69■■□□□ 1.7
CD47-202ENST00000361309 PLCD1P51178 756 aa25.69■■□□□ 1.7
CD47-202ENST00000361309 TDHQ8IZJ6 230 aa25.69■■□□□ 1.7
CD47-202ENST00000361309 UBE2OQ9C0C9 1292 aaKnown RBP25.69■■□□□ 1.7
CD47-202ENST00000361309 CABP5Q9NP86 173 aa25.69■■□□□ 1.7
CD47-202ENST00000361309 FLRT1Q9NZU1 646 aa25.69■■□□□ 1.7
CD47-202ENST00000361309 SHMT1P34896 483 aa25.68■■□□□ 1.7
CD47-202ENST00000361309 LRRC26Q2I0M4 334 aa25.68■■□□□ 1.7
CD47-202ENST00000361309 LRIT3Q3SXY7 679 aa25.68■■□□□ 1.7
CD47-202ENST00000361309 GPR153Q6NV75 609 aa25.68■■□□□ 1.7
CD47-202ENST00000361309 CEP85Q6P2H3 762 aa25.68■■□□□ 1.7
CD47-202ENST00000361309 AACSQ86V21 672 aa25.68■■□□□ 1.7
CD47-202ENST00000361309 EXOC6BQ9Y2D4 811 aa25.68■■□□□ 1.7
CD47-202ENST00000361309 SLC15A5A6NIM6 579 aa25.67■■□□□ 1.7
CD47-202ENST00000361309 MFSD14CQ5VZR4 134 aa25.67■■□□□ 1.7
CD47-202ENST00000361309 DEFB123Q8N688 67 aa25.67■■□□□ 1.7
CD47-202ENST00000361309 RIOK1Q9BRS2 568 aaKnown RBP25.67■■□□□ 1.7
CD47-202ENST00000361309 BTBD7Q9P203 1132 aa25.67■■□□□ 1.7
CD47-202ENST00000361309 PTPREP23469 700 aa25.66■■□□□ 1.7
CD47-202ENST00000361309 GUCY1A2P33402 732 aa25.66■■□□□ 1.7
CD47-202ENST00000361309 TMED8Q6PL24 325 aaPredicted RBP25.66■■□□□ 1.7
CD47-202ENST00000361309 LBX2Q6XYB7 198 aa25.66■■□□□ 1.7
CD47-202ENST00000361309 Q7L0L9 218 aa25.66■■□□□ 1.7
CD47-202ENST00000361309 RPAP3Q9H6T3 665 aaPredicted RBP25.66■■□□□ 1.7
CD47-202ENST00000361309 RLFQ13129 1914 aa25.65■■□□□ 1.7
CD47-202ENST00000361309 DLL1O00548 723 aa25.65■■□□□ 1.7
CD47-202ENST00000361309 POLR3DP05423 398 aaPredicted RBP25.65■■□□□ 1.7
CD47-202ENST00000361309 ERC1Q8IUD2 1116 aa25.65■■□□□ 1.7
CD47-202ENST00000361309 IVNS1ABPQ9Y6Y0 642 aa25.65■■□□□ 1.7
CD47-202ENST00000361309 MAGEB6P1A0A0J9YX57 407 aa25.64■■□□□ 1.7
CD47-202ENST00000361309 SPDYE16A6NNV3 312 aaPredicted RBP25.64■■□□□ 1.7
CD47-202ENST00000361309 GRB14Q14449 540 aa25.64■■□□□ 1.7
CD47-202ENST00000361309 SEPT2Q15019 361 aa25.64■■□□□ 1.7
CD47-202ENST00000361309 NPLOC4Q8TAT6 608 aa25.64■■□□□ 1.7
CD47-202ENST00000361309 LAMA2P24043 3122 aaKnown RBP25.63■■□□□ 1.69
CD47-202ENST00000361309 ZNFX1Q9P2E3 1918 aaKnown RBP25.63■■□□□ 1.69
CD47-202ENST00000361309 ATP2B2Q01814 1243 aa25.63■■□□□ 1.69
CD47-202ENST00000361309 GABPAQ06546 454 aa25.63■■□□□ 1.69
CD47-202ENST00000361309 IL1RAPL2Q9NP60 686 aa25.63■■□□□ 1.69
CD47-202ENST00000361309 HOXC6P09630 235 aa25.62■■□□□ 1.69
CD47-202ENST00000361309 CNGA1P29973 690 aa25.62■■□□□ 1.69
CD47-202ENST00000361309 MDM2Q00987 491 aaPredicted RBP25.62■■□□□ 1.69
CD47-202ENST00000361309 EVX2Q03828 476 aa25.62■■□□□ 1.69
CD47-202ENST00000361309 SENP6Q9GZR1 1112 aaPredicted RBP25.62■■□□□ 1.69
CD47-202ENST00000361309 DDX20Q9UHI6 824 aaKnown RBP25.62■■□□□ 1.69
CD47-202ENST00000361309 BAZ2AQ9UIF9 1905 aaKnown RBP25.62■■□□□ 1.69
CD47-202ENST00000361309 ZNF236Q9UL36 1845 aa25.61■■□□□ 1.69
CD47-202ENST00000361309 CUL9Q8IWT3 2517 aa25.61■■□□□ 1.69
CD47-202ENST00000361309 MPHOSPH10O00566 681 aaKnown RBP25.61■■□□□ 1.69
CD47-202ENST00000361309 PDE6AP16499 860 aa25.61■■□□□ 1.69
CD47-202ENST00000361309 CYP2C19P33261 490 aa25.61■■□□□ 1.69
CD47-202ENST00000361309 HNRNPUQ00839 825 aaKnown RBP eCLIP25.61■■□□□ 1.69
CD47-202ENST00000361309 TTF1Q15361 905 aaPredicted RBP25.61■■□□□ 1.69
CD47-202ENST00000361309 SLC9C2Q5TAH2 1124 aa25.61■■□□□ 1.69
CD47-202ENST00000361309 CRNKL1Q9BZJ0 848 aaKnown RBP25.61■■□□□ 1.69
CD47-202ENST00000361309 MCM9Q9NXL9 1143 aa25.61■■□□□ 1.69
CD47-202ENST00000361309 A0A0G2JMZ2 1700 aa25.6■■□□□ 1.69
CD47-202ENST00000361309 A0A1W2PRG0 241 aa25.6■■□□□ 1.69
CD47-202ENST00000361309 RHPN1Q8TCX5 695 aa25.6■■□□□ 1.69
CD47-202ENST00000361309 PARP14Q460N5 1801 aa25.59■■□□□ 1.69
CD47-202ENST00000361309 MSCO60682 206 aa25.59■■□□□ 1.69
CD47-202ENST00000361309 COG2Q14746 738 aa25.59■■□□□ 1.69
CD47-202ENST00000361309 TRPV1Q8NER1 839 aa25.59■■□□□ 1.69
CD47-202ENST00000361309 LPAR1Q92633 364 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms