RNA–Protein interactions for RNA: ENST00000359518.7

TRIM3-202, Transcript of tripartite motif containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRIM3, Length 3,042 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-202ENST00000359518 CEP131Q9UPN4 1083 aa23.61■■□□□ 1.37
TRIM3-202ENST00000359518 PARP4Q9UKK3 1724 aaKnown RBP23.61■■□□□ 1.37
TRIM3-202ENST00000359518 MROH5Q6ZUA9 1318 aa23.61■■□□□ 1.37
TRIM3-202ENST00000359518 SYNRGQ9UMZ2 1314 aa23.61■■□□□ 1.37
TRIM3-202ENST00000359518 CASP14P31944 242 aa23.61■■□□□ 1.37
TRIM3-202ENST00000359518 CYP2C19P33261 490 aa23.61■■□□□ 1.37
TRIM3-202ENST00000359518 PAGE5Q96GU1 130 aa23.61■■□□□ 1.37
TRIM3-202ENST00000359518 TPM1P09493 284 aa23.6■■□□□ 1.37
TRIM3-202ENST00000359518 CDC25AP30304 524 aa23.6■■□□□ 1.37
TRIM3-202ENST00000359518 SMC1AQ14683 1233 aaKnown RBP23.6■■□□□ 1.37
TRIM3-202ENST00000359518 ZNF569Q5MCW4 686 aa23.6■■□□□ 1.37
TRIM3-202ENST00000359518 SUSD4Q5VX71 490 aa23.6■■□□□ 1.37
TRIM3-202ENST00000359518 PLEKHG2Q9H7P9 1386 aa23.6■■□□□ 1.37
TRIM3-202ENST00000359518 APTXQ7Z2E3 356 aaKnown RBP23.6■■□□□ 1.37
TRIM3-202ENST00000359518 ADGRG1Q9Y653 693 aa23.6■■□□□ 1.37
TRIM3-202ENST00000359518 KANK3Q6NY19 840 aa23.59■■□□□ 1.37
TRIM3-202ENST00000359518 AEBP2Q6ZN18 517 aaPredicted RBP23.59■■□□□ 1.37
TRIM3-202ENST00000359518 RSRC2Q7L4I2 434 aaKnown RBP23.59■■□□□ 1.37
TRIM3-202ENST00000359518 ZNF579Q8NAF0 562 aaKnown RBP23.59■■□□□ 1.37
TRIM3-202ENST00000359518 MAPK8IP1Q9UQF2 711 aa23.59■■□□□ 1.37
TRIM3-202ENST00000359518 TRIML1Q8N9V2 468 aa23.59■■□□□ 1.37
TRIM3-202ENST00000359518 ACRBPQ8NEB7 543 aa23.59■■□□□ 1.37
TRIM3-202ENST00000359518 GOLGA1Q92805 767 aa23.59■■□□□ 1.37
TRIM3-202ENST00000359518 HNRNPH2P55795 449 aaKnown RBP23.59■■□□□ 1.37
TRIM3-202ENST00000359518 DPYDQ12882 1025 aa23.59■■□□□ 1.37
TRIM3-202ENST00000359518 SPATA1Q5VX52 437 aa23.59■■□□□ 1.37
TRIM3-202ENST00000359518 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.59■■□□□ 1.37
TRIM3-202ENST00000359518 CTNND2Q9UQB3 1225 aa23.59■■□□□ 1.37
TRIM3-202ENST00000359518 ERCC5P28715 1186 aaPredicted RBP23.58■■□□□ 1.37
TRIM3-202ENST00000359518 TAF3Q5VWG9 929 aa23.58■■□□□ 1.37
TRIM3-202ENST00000359518 FXR1P51114 621 aaKnown RBP eCLIP23.58■■□□□ 1.37
TRIM3-202ENST00000359518 CDC5LQ99459 802 aaKnown RBP23.58■■□□□ 1.37
TRIM3-202ENST00000359518 EVX2Q03828 476 aa23.57■■□□□ 1.36
TRIM3-202ENST00000359518 PKN1Q16512 942 aa23.57■■□□□ 1.36
TRIM3-202ENST00000359518 ELOA2Q8IYF1 753 aaPredicted RBP23.57■■□□□ 1.36
TRIM3-202ENST00000359518 SPATA20Q8TB22 786 aa23.57■■□□□ 1.36
TRIM3-202ENST00000359518 VPS16Q9H269 839 aa23.57■■□□□ 1.36
TRIM3-202ENST00000359518 CHMP4BP1P59074 171 aa23.57■■□□□ 1.36
TRIM3-202ENST00000359518 KIF4BQ2VIQ3 1234 aa23.57■■□□□ 1.36
TRIM3-202ENST00000359518 ENAHQ8N8S7 591 aaPredicted RBP23.57■■□□□ 1.36
TRIM3-202ENST00000359518 ADD3Q9UEY8 706 aaKnown RBP23.57■■□□□ 1.36
TRIM3-202ENST00000359518 KDM4FA0A1W2PPD8 638 aa23.57■■□□□ 1.36
TRIM3-202ENST00000359518 KRT2P35908 639 aa23.57■■□□□ 1.36
TRIM3-202ENST00000359518 TMTC2Q8N394 836 aa23.57■■□□□ 1.36
TRIM3-202ENST00000359518 RABGGTAQ92696 567 aa23.57■■□□□ 1.36
TRIM3-202ENST00000359518 KIF5CO60282 957 aa23.56■■□□□ 1.36
TRIM3-202ENST00000359518 DYNLL1P63167 89 aaKnown RBP23.56■■□□□ 1.36
TRIM3-202ENST00000359518 CUL4BQ13620 913 aa23.56■■□□□ 1.36
TRIM3-202ENST00000359518 MCM6Q14566 821 aa23.56■■□□□ 1.36
TRIM3-202ENST00000359518 RNF41Q9H4P4 317 aaPredicted RBP23.56■■□□□ 1.36
TRIM3-202ENST00000359518 LONRF2Q1L5Z9 754 aa23.56■■□□□ 1.36
TRIM3-202ENST00000359518 SLC4A8Q2Y0W8 1093 aa23.56■■□□□ 1.36
TRIM3-202ENST00000359518 ESR2Q92731 530 aa23.56■■□□□ 1.36
TRIM3-202ENST00000359518 AATFQ9NY61 560 aaKnown RBP eCLIP23.56■■□□□ 1.36
TRIM3-202ENST00000359518 GYG1P46976 350 aa23.55■■□□□ 1.36
TRIM3-202ENST00000359518 PANX2Q96RD6 677 aa23.55■■□□□ 1.36
TRIM3-202ENST00000359518 FUT8Q9BYC5 575 aa23.55■■□□□ 1.36
TRIM3-202ENST00000359518 SUGCTQ9HAC7 445 aa23.55■■□□□ 1.36
TRIM3-202ENST00000359518 RNF225M0QZC1 329 aaPredicted RBP23.55■■□□□ 1.36
TRIM3-202ENST00000359518 RHOXF2BP0C7M4 288 aa23.55■■□□□ 1.36
TRIM3-202ENST00000359518 XBP1P17861 261 aa23.55■■□□□ 1.36
TRIM3-202ENST00000359518 GNAT2P19087 354 aa23.55■■□□□ 1.36
TRIM3-202ENST00000359518 TXLNAP40222 546 aa23.55■■□□□ 1.36
TRIM3-202ENST00000359518 PTGDRQ13258 359 aa23.55■■□□□ 1.36
TRIM3-202ENST00000359518 WWC2Q6AWC2 1192 aa23.55■■□□□ 1.36
TRIM3-202ENST00000359518 RHOXF2Q9BQY4 288 aa23.55■■□□□ 1.36
TRIM3-202ENST00000359518 SOS2Q07890 1332 aaPredicted RBP23.55■■□□□ 1.36
TRIM3-202ENST00000359518 PPP1R3GB7ZBB8 358 aa23.54■■□□□ 1.36
TRIM3-202ENST00000359518 GYPCP04921 128 aa23.54■■□□□ 1.36
TRIM3-202ENST00000359518 SEC23AQ15436 765 aa23.54■■□□□ 1.36
TRIM3-202ENST00000359518 FILIP1LQ4L180 1135 aa23.54■■□□□ 1.36
TRIM3-202ENST00000359518 IFIT1BQ5T764 474 aaKnown RBP23.54■■□□□ 1.36
TRIM3-202ENST00000359518 BTG4Q9NY30 223 aa23.54■■□□□ 1.36
TRIM3-202ENST00000359518 N4BP3O15049 544 aa23.54■■□□□ 1.36
TRIM3-202ENST00000359518 NMT2O60551 498 aa23.54■■□□□ 1.36
TRIM3-202ENST00000359518 MFAP3LO75121 409 aa23.54■■□□□ 1.36
TRIM3-202ENST00000359518 VEGFAP15692 232 aaPredicted RBP23.54■■□□□ 1.36
TRIM3-202ENST00000359518 RRAGBQ5VZM2 374 aa23.54■■□□□ 1.36
TRIM3-202ENST00000359518 RNF26Q9BY78 433 aaPredicted RBP23.54■■□□□ 1.36
TRIM3-202ENST00000359518 ZNF34Q8IZ26 560 aa23.54■■□□□ 1.36
TRIM3-202ENST00000359518 SLC35F6Q8N357 371 aa23.54■■□□□ 1.36
TRIM3-202ENST00000359518 TAB2Q9NYJ8 693 aa23.54■■□□□ 1.36
TRIM3-202ENST00000359518 MAGEB6P1A0A0J9YX57 407 aa23.53■■□□□ 1.36
TRIM3-202ENST00000359518 ADAMTS3O15072 1205 aa23.53■■□□□ 1.36
TRIM3-202ENST00000359518 CHRNDQ07001 517 aa23.53■■□□□ 1.36
TRIM3-202ENST00000359518 PHF20Q9BVI0 1012 aa23.53■■□□□ 1.36
TRIM3-202ENST00000359518 CALCOCO1Q9P1Z2 691 aa23.53■■□□□ 1.36
TRIM3-202ENST00000359518 STRCP1A6NGW2 1772 aa23.52■■□□□ 1.36
TRIM3-202ENST00000359518 TOGARAM1Q9Y4F4 1720 aa23.52■■□□□ 1.36
TRIM3-202ENST00000359518 PNPLA7Q6ZV29 1317 aa23.52■■□□□ 1.36
TRIM3-202ENST00000359518 MCM7P33993 719 aa23.52■■□□□ 1.36
TRIM3-202ENST00000359518 IGHMBP2P38935 993 aaKnown RBP23.52■■□□□ 1.36
TRIM3-202ENST00000359518 SRGAP1Q7Z6B7 1085 aa23.52■■□□□ 1.36
TRIM3-202ENST00000359518 ZSCAN10Q96SZ4 725 aaPredicted RBP23.52■■□□□ 1.36
TRIM3-202ENST00000359518 PAPPAQ13219 1627 aa23.52■■□□□ 1.36
TRIM3-202ENST00000359518 CHD4Q14839 1912 aa23.52■■□□□ 1.36
TRIM3-202ENST00000359518 H3BQF6 201 aa23.52■■□□□ 1.36
TRIM3-202ENST00000359518 PES1O00541 588 aaKnown RBP23.52■■□□□ 1.36
TRIM3-202ENST00000359518 TTC38Q5R3I4 469 aa23.52■■□□□ 1.36
TRIM3-202ENST00000359518 PIK3AP1Q6ZUJ8 805 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms