RNA–Protein interactions for RNA: ENST00000359440.5

TMC3-201, Transcript of transmembrane channel like 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TMC3, Length 4,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC3-201ENST00000359440 RBM5P52756 815 aaKnown RBP eCLIP12.63□□□□□ -0.39
TMC3-201ENST00000359440 PPP2R5EQ16537 467 aa12.63□□□□□ -0.39
TMC3-201ENST00000359440 GALNT17Q6IS24 598 aa12.63□□□□□ -0.39
TMC3-201ENST00000359440 SPATA5Q8NB90 893 aa12.63□□□□□ -0.39
TMC3-201ENST00000359440 RPGRQ92834 1020 aaKnown RBP12.63□□□□□ -0.39
TMC3-201ENST00000359440 ZNF594Q96JF6 807 aaPredicted RBP12.63□□□□□ -0.39
TMC3-201ENST00000359440 ZKSCAN3Q9BRR0 538 aa12.63□□□□□ -0.39
TMC3-201ENST00000359440 MTUS1Q9ULD2 1270 aa12.63□□□□□ -0.39
TMC3-201ENST00000359440 PXDNLA1KZ92 1463 aa12.62□□□□□ -0.39
TMC3-201ENST00000359440 SEMA3EO15041 775 aa12.62□□□□□ -0.39
TMC3-201ENST00000359440 ACTN4O43707 911 aaKnown RBP12.62□□□□□ -0.39
TMC3-201ENST00000359440 ADD1P35611 737 aaKnown RBP12.62□□□□□ -0.39
TMC3-201ENST00000359440 MORC3Q14149 939 aa12.62□□□□□ -0.39
TMC3-201ENST00000359440 TMEM132AQ24JP5 1023 aa12.62□□□□□ -0.39
TMC3-201ENST00000359440 C6orf163Q5TEZ5 329 aa12.62□□□□□ -0.39
TMC3-201ENST00000359440 SND1Q7KZF4 910 aaKnown RBP eCLIP12.62□□□□□ -0.39
TMC3-201ENST00000359440 HYOU1Q9Y4L1 999 aa12.62□□□□□ -0.39
TMC3-201ENST00000359440 NDUFB9Q9Y6M9 179 aa12.62□□□□□ -0.39
TMC3-201ENST00000359440 PNMA6AP0CW24 399 aaPredicted RBP12.62□□□□□ -0.39
TMC3-201ENST00000359440 FANCBQ8NB91 859 aa12.62□□□□□ -0.39
TMC3-201ENST00000359440 CTNNBL1Q8WYA6 563 aaPredicted RBP12.62□□□□□ -0.39
TMC3-201ENST00000359440 EPN1Q9Y6I3 576 aaPredicted RBP12.62□□□□□ -0.39
TMC3-201ENST00000359440 RSRC1Q96IZ7 334 aaKnown RBP12.62□□□□□ -0.39
TMC3-201ENST00000359440 IFT74Q96LB3 600 aa12.62□□□□□ -0.39
TMC3-201ENST00000359440 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.62□□□□□ -0.39
TMC3-201ENST00000359440 KCNJ14Q9UNX9 436 aa12.62□□□□□ -0.39
TMC3-201ENST00000359440 NIP7Q9Y221 180 aaKnown RBP eCLIP12.62□□□□□ -0.39
TMC3-201ENST00000359440 TRAF5O00463 557 aa12.61□□□□□ -0.39
TMC3-201ENST00000359440 PCCAP05165 728 aaPredicted RBP12.61□□□□□ -0.39
TMC3-201ENST00000359440 MYL1P05976 194 aa12.61□□□□□ -0.39
TMC3-201ENST00000359440 PHKG2P15735 406 aa12.61□□□□□ -0.39
TMC3-201ENST00000359440 APOA5Q6Q788 366 aa12.61□□□□□ -0.39
TMC3-201ENST00000359440 IFIH1Q9BYX4 1025 aaKnown RBP12.61□□□□□ -0.39
TMC3-201ENST00000359440 CUEDC2Q9H467 287 aa12.61□□□□□ -0.39
TMC3-201ENST00000359440 MAST3O60307 1309 aa12.61□□□□□ -0.39
TMC3-201ENST00000359440 NLRP1Q9C000 1473 aa12.61□□□□□ -0.39
TMC3-201ENST00000359440 SASH1O94885 1247 aa12.61□□□□□ -0.39
TMC3-201ENST00000359440 GNA14O95837 355 aa12.61□□□□□ -0.39
TMC3-201ENST00000359440 TOB2Q14106 344 aaPredicted RBP12.61□□□□□ -0.39
TMC3-201ENST00000359440 DESI2Q9BSY9 194 aa12.61□□□□□ -0.39
TMC3-201ENST00000359440 RNF26Q9BY78 433 aaPredicted RBP12.61□□□□□ -0.39
TMC3-201ENST00000359440 PRR36Q9H6K5 1346 aa12.61□□□□□ -0.39
TMC3-201ENST00000359440 EEF1GP26641 437 aaKnown RBP12.61□□□□□ -0.39
TMC3-201ENST00000359440 NONOQ15233 471 aaKnown RBP eCLIP12.61□□□□□ -0.39
TMC3-201ENST00000359440 SYCE1Q8N0S2 351 aa12.61□□□□□ -0.39
TMC3-201ENST00000359440 CETN3O15182 167 aa12.61□□□□□ -0.39
TMC3-201ENST00000359440 DTNBO60941 627 aa12.61□□□□□ -0.39
TMC3-201ENST00000359440 PARP1P09874 1014 aaKnown RBP12.61□□□□□ -0.39
TMC3-201ENST00000359440 PDE6AP16499 860 aa12.61□□□□□ -0.39
TMC3-201ENST00000359440 LONP1P36776 959 aaKnown RBP12.61□□□□□ -0.39
TMC3-201ENST00000359440 MRPL12P52815 198 aaKnown RBP12.61□□□□□ -0.39
TMC3-201ENST00000359440 ZNF804AQ7Z570 1209 aa12.61□□□□□ -0.39
TMC3-201ENST00000359440 HELBQ8NG08 1087 aaPredicted RBP12.61□□□□□ -0.39
TMC3-201ENST00000359440 ATP10DQ9P241 1426 aa12.61□□□□□ -0.39
TMC3-201ENST00000359440 NT5C2P49902 561 aa12.6□□□□□ -0.39
TMC3-201ENST00000359440 IFNL3Q8IZI9 196 aa12.6□□□□□ -0.39
TMC3-201ENST00000359440 TLR7Q9NYK1 1049 aaKnown RBP12.6□□□□□ -0.39
TMC3-201ENST00000359440 ATP2A1O14983 1001 aa12.6□□□□□ -0.39
TMC3-201ENST00000359440 PGBD1Q96JS3 809 aa12.6□□□□□ -0.39
TMC3-201ENST00000359440 RPAP1Q9BWH6 1393 aaPredicted RBP12.6□□□□□ -0.39
TMC3-201ENST00000359440 ANKARQ7Z5J8 1434 aa12.6□□□□□ -0.39
TMC3-201ENST00000359440 FMNL1O95466 1100 aaPredicted RBP12.6□□□□□ -0.39
TMC3-201ENST00000359440 CALCOCO2Q13137 446 aa12.6□□□□□ -0.39
TMC3-201ENST00000359440 RAPGEF1Q13905 1077 aa12.6□□□□□ -0.39
TMC3-201ENST00000359440 CCDC174Q6PII3 467 aa12.6□□□□□ -0.39
TMC3-201ENST00000359440 NRXN1Q9ULB1 1477 aa12.6□□□□□ -0.39
TMC3-201ENST00000359440 BTBD18B2RXH4 712 aa12.6□□□□□ -0.39
TMC3-201ENST00000359440 DDAH1O94760 285 aa12.6□□□□□ -0.39
TMC3-201ENST00000359440 IFNAR1P17181 557 aa12.6□□□□□ -0.39
TMC3-201ENST00000359440 ASIC2Q16515 512 aa12.6□□□□□ -0.39
TMC3-201ENST00000359440 CEP57Q86XR8 500 aa12.6□□□□□ -0.39
TMC3-201ENST00000359440 SMARCC2Q8TAQ2 1214 aa12.6□□□□□ -0.39
TMC3-201ENST00000359440 ANKRD7Q92527 254 aa12.6□□□□□ -0.39
TMC3-201ENST00000359440 MYL10Q9BUA6 226 aa12.6□□□□□ -0.39
TMC3-201ENST00000359440 HDAC9Q9UKV0 1011 aa12.6□□□□□ -0.39
TMC3-201ENST00000359440 ALKQ9UM73 1620 aa12.59□□□□□ -0.39
TMC3-201ENST00000359440 A0A1W2PRG0 241 aa12.59□□□□□ -0.39
TMC3-201ENST00000359440 SLFN14P0C7P3 912 aa12.59□□□□□ -0.39
TMC3-201ENST00000359440 LIFRP42702 1097 aa12.59□□□□□ -0.39
TMC3-201ENST00000359440 COPB1P53618 953 aaKnown RBP12.59□□□□□ -0.39
TMC3-201ENST00000359440 LETM2Q2VYF4 491 aa12.59□□□□□ -0.39
TMC3-201ENST00000359440 NBPF5PQ86XG9 351 aaPredicted RBP12.59□□□□□ -0.39
TMC3-201ENST00000359440 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.59□□□□□ -0.39
TMC3-201ENST00000359440 DNAI2Q9GZS0 605 aa12.59□□□□□ -0.39
TMC3-201ENST00000359440 PDE11AQ9HCR9 933 aa12.59□□□□□ -0.39
TMC3-201ENST00000359440 PLCB1Q9NQ66 1216 aa12.59□□□□□ -0.39
TMC3-201ENST00000359440 RNF14Q9UBS8 474 aa12.59□□□□□ -0.39
TMC3-201ENST00000359440 UTP11Q9Y3A2 253 aaKnown RBP12.59□□□□□ -0.39
TMC3-201ENST00000359440 FLOT1O75955 427 aa12.59□□□□□ -0.39
TMC3-201ENST00000359440 EFCAB13Q8IY85 973 aa12.59□□□□□ -0.39
TMC3-201ENST00000359440 MAP3K9P80192 1104 aa12.59□□□□□ -0.39
TMC3-201ENST00000359440 ARID5AQ03989 594 aa12.59□□□□□ -0.39
TMC3-201ENST00000359440 PTPN12Q05209 780 aaKnown RBP12.59□□□□□ -0.39
TMC3-201ENST00000359440 PPARAQ07869 468 aa12.59□□□□□ -0.39
TMC3-201ENST00000359440 HAUS3Q68CZ6 603 aa12.59□□□□□ -0.39
TMC3-201ENST00000359440 ZBTB38Q8NAP3 1195 aaPredicted RBP12.59□□□□□ -0.39
TMC3-201ENST00000359440 UBLCP1Q8WVY7 318 aaPredicted RBP12.59□□□□□ -0.39
TMC3-201ENST00000359440 EPB41P11171 864 aaKnown RBP12.58□□□□□ -0.39
TMC3-201ENST00000359440 LACTBP83111 547 aaPredicted RBP12.58□□□□□ -0.39
TMC3-201ENST00000359440 CTDSPL2Q05D32 466 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms