RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 PPP1R3GB7ZBB8 358 aa12.37□□□□□ -0.43
RPE-202ENST00000359429 MBD4O95243 580 aa12.37□□□□□ -0.43
RPE-202ENST00000359429 GPTP24298 496 aa12.37□□□□□ -0.43
RPE-202ENST00000359429 ACTN2P35609 894 aa12.37□□□□□ -0.43
RPE-202ENST00000359429 RTN1Q16799 776 aa12.37□□□□□ -0.43
RPE-202ENST00000359429 HDXQ7Z353 690 aa12.37□□□□□ -0.43
RPE-202ENST00000359429 PROSER2Q86WR7 435 aaPredicted RBP12.37□□□□□ -0.43
RPE-202ENST00000359429 ZBTB38Q8NAP3 1195 aaPredicted RBP12.37□□□□□ -0.43
RPE-202ENST00000359429 NOA1Q8NC60 698 aaKnown RBP12.37□□□□□ -0.43
RPE-202ENST00000359429 PAGE5Q96GU1 130 aa12.37□□□□□ -0.43
RPE-202ENST00000359429 NAPBQ9H115 298 aa12.37□□□□□ -0.43
RPE-202ENST00000359429 COL18A1P39060 1754 aa12.37□□□□□ -0.43
RPE-202ENST00000359429 AKAP11Q9UKA4 1901 aa12.36□□□□□ -0.43
RPE-202ENST00000359429 PATL2C9JE40 543 aaKnown RBP12.36□□□□□ -0.43
RPE-202ENST00000359429 TTF1Q15361 905 aaPredicted RBP12.36□□□□□ -0.43
RPE-202ENST00000359429 HELBQ8NG08 1087 aaPredicted RBP12.36□□□□□ -0.43
RPE-202ENST00000359429 NAA15Q9BXJ9 866 aaKnown RBP12.36□□□□□ -0.43
RPE-202ENST00000359429 CNNM1Q9NRU3 951 aa12.36□□□□□ -0.43
RPE-202ENST00000359429 CTAGE9A4FU28 777 aa12.36□□□□□ -0.43
RPE-202ENST00000359429 GSG1L2A8MUP6 293 aa12.36□□□□□ -0.43
RPE-202ENST00000359429 SMIM22K7EJ46 135 aa12.36□□□□□ -0.43
RPE-202ENST00000359429 CCT6AP40227 531 aaKnown RBP12.36□□□□□ -0.43
RPE-202ENST00000359429 ARHGAP25P42331 645 aa12.36□□□□□ -0.43
RPE-202ENST00000359429 TRIM28Q13263 835 aaKnown RBP12.36□□□□□ -0.43
RPE-202ENST00000359429 ALX1Q15699 326 aa12.36□□□□□ -0.43
RPE-202ENST00000359429 HLFQ16534 295 aa12.36□□□□□ -0.43
RPE-202ENST00000359429 NOM1Q5C9Z4 860 aaKnown RBP12.36□□□□□ -0.43
RPE-202ENST00000359429 AKNAD1Q5T1N1 836 aa12.36□□□□□ -0.43
RPE-202ENST00000359429 SH3RF1Q7Z6J0 888 aa12.36□□□□□ -0.43
RPE-202ENST00000359429 NUP133Q8WUM0 1156 aa12.36□□□□□ -0.43
RPE-202ENST00000359429 WASF1Q92558 559 aa12.36□□□□□ -0.43
RPE-202ENST00000359429 ZNF512BQ96KM6 892 aaPredicted RBP12.36□□□□□ -0.43
RPE-202ENST00000359429 TOMM22Q9NS69 142 aa12.36□□□□□ -0.43
RPE-202ENST00000359429 ALS2Q96Q42 1657 aa12.35□□□□□ -0.43
RPE-202ENST00000359429 hCG_1642624A0A1W2PR95 340 aa12.35□□□□□ -0.43
RPE-202ENST00000359429 PHACTR2O75167 634 aa12.35□□□□□ -0.43
RPE-202ENST00000359429 DEXIO95424 95 aa12.35□□□□□ -0.43
RPE-202ENST00000359429 KANK3Q6NY19 840 aa12.35□□□□□ -0.43
RPE-202ENST00000359429 SRLQ86TD4 932 aa12.35□□□□□ -0.43
RPE-202ENST00000359429 TRIM22Q8IYM9 498 aa12.35□□□□□ -0.43
RPE-202ENST00000359429 MAGEB6Q8N7X4 407 aa12.35□□□□□ -0.43
RPE-202ENST00000359429 ZCRB1Q8TBF4 217 aaKnown RBP12.35□□□□□ -0.43
RPE-202ENST00000359429 SYMPKQ92797 1274 aaKnown RBP12.35□□□□□ -0.43
RPE-202ENST00000359429 MYO5AQ9Y4I1 1855 aaKnown RBP12.35□□□□□ -0.43
RPE-202ENST00000359429 LRRIQ3A6PVS8 624 aaPredicted RBP12.35□□□□□ -0.43
RPE-202ENST00000359429 PDE8BO95263 885 aa12.35□□□□□ -0.43
RPE-202ENST00000359429 CASP8Q14790 479 aa12.35□□□□□ -0.43
RPE-202ENST00000359429 NCAPH2Q6IBW4 605 aa12.35□□□□□ -0.43
RPE-202ENST00000359429 IQUBQ8NA54 791 aa12.35□□□□□ -0.43
RPE-202ENST00000359429 TSPYL1Q9H0U9 437 aa12.35□□□□□ -0.43
RPE-202ENST00000359429 TBC1D2BQ9UPU7 963 aa12.35□□□□□ -0.43
RPE-202ENST00000359429 LRP6O75581 1613 aa12.35□□□□□ -0.43
RPE-202ENST00000359429 KDM4FA0A1W2PPD8 638 aa12.34□□□□□ -0.43
RPE-202ENST00000359429 ERVV-2B6SEH9 535 aa12.34□□□□□ -0.43
RPE-202ENST00000359429 FECHP22830 423 aa12.34□□□□□ -0.43
RPE-202ENST00000359429 ARID4AP29374 1257 aaPredicted RBP12.34□□□□□ -0.43
RPE-202ENST00000359429 WTAPQ15007 396 aa12.34□□□□□ -0.43
RPE-202ENST00000359429 MFSD6Q6ZSS7 791 aa12.34□□□□□ -0.43
RPE-202ENST00000359429 AATFQ9NY61 560 aaKnown RBP eCLIP12.34□□□□□ -0.43
RPE-202ENST00000359429 VPS54Q9P1Q0 977 aa12.34□□□□□ -0.43
RPE-202ENST00000359429 TRIM10Q9UDY6 481 aa12.34□□□□□ -0.43
RPE-202ENST00000359429 RRP15Q9Y3B9 282 aaKnown RBP12.34□□□□□ -0.43
RPE-202ENST00000359429 NID2Q14112 1375 aa12.34□□□□□ -0.43
RPE-202ENST00000359429 PRDM1O75626 825 aa12.34□□□□□ -0.43
RPE-202ENST00000359429 FANCBQ8NB91 859 aa12.34□□□□□ -0.43
RPE-202ENST00000359429 RASSF4Q9H2L5 321 aa12.34□□□□□ -0.43
RPE-202ENST00000359429 ABHD10Q9NUJ1 306 aa12.34□□□□□ -0.43
RPE-202ENST00000359429 CTNND2Q9UQB3 1225 aa12.34□□□□□ -0.43
RPE-202ENST00000359429 MYH7P12883 1935 aa12.33□□□□□ -0.43
RPE-202ENST00000359429 AMPD2Q01433 879 aa12.33□□□□□ -0.43
RPE-202ENST00000359429 KRT31Q15323 416 aa12.33□□□□□ -0.43
RPE-202ENST00000359429 DNAJC10Q8IXB1 793 aa12.33□□□□□ -0.43
RPE-202ENST00000359429 LCORLQ8N3X6 602 aa12.33□□□□□ -0.43
RPE-202ENST00000359429 NAPGQ99747 312 aaPredicted RBP12.33□□□□□ -0.43
RPE-202ENST00000359429 SLF1Q9BQI6 1058 aa12.33□□□□□ -0.43
RPE-202ENST00000359429 VPS16Q9H269 839 aa12.33□□□□□ -0.43
RPE-202ENST00000359429 BLZF1Q9H2G9 400 aa12.33□□□□□ -0.43
RPE-202ENST00000359429 RSPH14Q9UHP6 348 aa12.33□□□□□ -0.43
RPE-202ENST00000359429 PCDH11XQ9BZA7 1347 aa12.33□□□□□ -0.44
RPE-202ENST00000359429 PCDH11YQ9BZA8 1340 aa12.33□□□□□ -0.44
RPE-202ENST00000359429 ANKRD18BA2A2Z9 1011 aa12.33□□□□□ -0.44
RPE-202ENST00000359429 CTAGE15A4D2H0 777 aa12.33□□□□□ -0.44
RPE-202ENST00000359429 POTEB2H3BUK9 544 aa12.33□□□□□ -0.44
RPE-202ENST00000359429 ERLIN1O75477 346 aa12.33□□□□□ -0.44
RPE-202ENST00000359429 CTAGE8P0CG41 777 aa12.33□□□□□ -0.44
RPE-202ENST00000359429 CTSWP56202 376 aa12.33□□□□□ -0.44
RPE-202ENST00000359429 PKN1Q16512 942 aa12.33□□□□□ -0.44
RPE-202ENST00000359429 CTAGE6Q86UF2 777 aa12.33□□□□□ -0.44
RPE-202ENST00000359429 CNGA4Q8IV77 575 aa12.33□□□□□ -0.44
RPE-202ENST00000359429 CTAGE4Q8IX94 777 aa12.33□□□□□ -0.44
RPE-202ENST00000359429 ZNF654Q8IZM8 581 aa12.33□□□□□ -0.44
RPE-202ENST00000359429 CHP1Q99653 195 aa12.33□□□□□ -0.44
RPE-202ENST00000359429 KRT23Q9C075 422 aa12.33□□□□□ -0.44
RPE-202ENST00000359429 TTF2Q9UNY4 1162 aaKnown RBP12.33□□□□□ -0.44
RPE-202ENST00000359429 TFR2Q9UP52 801 aa12.33□□□□□ -0.44
RPE-202ENST00000359429 CEP131Q9UPN4 1083 aa12.33□□□□□ -0.44
RPE-202ENST00000359429 REXO2Q9Y3B8 237 aaKnown RBP12.33□□□□□ -0.44
RPE-202ENST00000359429 WDR17Q8IZU2 1322 aa12.33□□□□□ -0.44
RPE-202ENST00000359429 TRIM75PA6NK02 468 aa12.32□□□□□ -0.44
RPE-202ENST00000359429 RASGRF1Q13972 1273 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms