RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 CT47A1Q5JQC4 288 aaPredicted RBP16.26■□□□□ 0.19
APP-205ENST00000358918 GRAMD1CQ8IYS0 662 aa16.26■□□□□ 0.19
APP-205ENST00000358918 STK11IPQ8N1F8 1099 aa16.26■□□□□ 0.19
APP-205ENST00000358918 PHKBQ93100 1093 aa16.26■□□□□ 0.19
APP-205ENST00000358918 ANGEL1Q9UNK9 670 aaKnown RBP16.26■□□□□ 0.19
APP-205ENST00000358918 NUTM2BA6NNL0 878 aaPredicted RBP16.25■□□□□ 0.19
APP-205ENST00000358918 NUTM2EB1AL46 878 aaPredicted RBP16.25■□□□□ 0.19
APP-205ENST00000358918 SHOX2O60902 331 aaPredicted RBP16.25■□□□□ 0.19
APP-205ENST00000358918 ARHGAP25P42331 645 aa16.25■□□□□ 0.19
APP-205ENST00000358918 TCIRG1Q13488 830 aa16.25■□□□□ 0.19
APP-205ENST00000358918 ATG9AQ7Z3C6 839 aa16.25■□□□□ 0.19
APP-205ENST00000358918 SLC4A9Q96Q91 983 aa16.25■□□□□ 0.19
APP-205ENST00000358918 CRACR2AQ9BSW2 395 aa16.25■□□□□ 0.19
APP-205ENST00000358918 ITGB4P16144 1822 aa16.25■□□□□ 0.19
APP-205ENST00000358918 COL22A1Q8NFW1 1626 aaPredicted RBP16.25■□□□□ 0.19
APP-205ENST00000358918 A0A0G2JS52 829 aa16.24■□□□□ 0.19
APP-205ENST00000358918 BCL9O00512 1426 aa16.24■□□□□ 0.19
APP-205ENST00000358918 GYPCP04921 128 aa16.24■□□□□ 0.19
APP-205ENST00000358918 ZFYP08048 801 aaPredicted RBP16.24■□□□□ 0.19
APP-205ENST00000358918 IL15P40933 162 aaPredicted RBP16.24■□□□□ 0.19
APP-205ENST00000358918 IARSP41252 1262 aaKnown RBP16.24■□□□□ 0.19
APP-205ENST00000358918 KIF6Q6ZMV9 814 aa16.24■□□□□ 0.19
APP-205ENST00000358918 FAM76AQ8TAV0 307 aa16.24■□□□□ 0.19
APP-205ENST00000358918 COG1Q8WTW3 980 aa16.24■□□□□ 0.19
APP-205ENST00000358918 ISCA1Q9BUE6 129 aa16.24■□□□□ 0.19
APP-205ENST00000358918 ITIH6Q6UXX5 1313 aa16.24■□□□□ 0.19
APP-205ENST00000358918 C4AP0C0L4 1744 aa16.24■□□□□ 0.19
APP-205ENST00000358918 C4BP0C0L5 1744 aa16.24■□□□□ 0.19
APP-205ENST00000358918 USP8P40818 1118 aa16.24■□□□□ 0.19
APP-205ENST00000358918 FXR1P51114 621 aaKnown RBP eCLIP16.24■□□□□ 0.19
APP-205ENST00000358918 FKBP4Q02790 459 aaKnown RBP eCLIP16.24■□□□□ 0.19
APP-205ENST00000358918 KLHL10Q6JEL2 608 aa16.24■□□□□ 0.19
APP-205ENST00000358918 CYP26C1Q6V0L0 522 aa16.24■□□□□ 0.19
APP-205ENST00000358918 ZNF594Q96JF6 807 aaPredicted RBP16.24■□□□□ 0.19
APP-205ENST00000358918 FBXO2Q9UK22 296 aaPredicted RBP16.24■□□□□ 0.19
APP-205ENST00000358918 LTBP4Q8N2S1 1624 aa16.24■□□□□ 0.19
APP-205ENST00000358918 TJP1Q07157 1748 aa16.24■□□□□ 0.19
APP-205ENST00000358918 EBAG9O00559 213 aa16.23■□□□□ 0.19
APP-205ENST00000358918 SEMA3EO15041 775 aa16.23■□□□□ 0.19
APP-205ENST00000358918 ABL1P00519 1130 aa16.23■□□□□ 0.19
APP-205ENST00000358918 RXRAP19793 462 aa16.23■□□□□ 0.19
APP-205ENST00000358918 PTPREP23469 700 aa16.23■□□□□ 0.19
APP-205ENST00000358918 CCT5P48643 541 aa16.23■□□□□ 0.19
APP-205ENST00000358918 LIG3P49916 1009 aa16.23■□□□□ 0.19
APP-205ENST00000358918 NOSTRINQ8IVI9 506 aa16.23■□□□□ 0.19
APP-205ENST00000358918 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.23■□□□□ 0.19
APP-205ENST00000358918 RNF216Q9NWF9 866 aaPredicted RBP16.23■□□□□ 0.19
APP-205ENST00000358918 TARSL2A2RTX5 802 aaKnown RBP16.23■□□□□ 0.19
APP-205ENST00000358918 ACTN4O43707 911 aaKnown RBP16.23■□□□□ 0.19
APP-205ENST00000358918 MMP14P50281 582 aa16.23■□□□□ 0.19
APP-205ENST00000358918 STX17P56962 302 aa16.23■□□□□ 0.19
APP-205ENST00000358918 ERVK-24P63145 666 aa16.23■□□□□ 0.19
APP-205ENST00000358918 CDKAL1Q5VV42 579 aa16.23■□□□□ 0.19
APP-205ENST00000358918 SH2B2O14492 632 aaPredicted RBP16.22■□□□□ 0.19
APP-205ENST00000358918 GRIN1Q05586 938 aa16.22■□□□□ 0.19
APP-205ENST00000358918 SAFBQ15424 915 aaKnown RBP eCLIP16.22■□□□□ 0.19
APP-205ENST00000358918 MICU3Q86XE3 530 aa16.22■□□□□ 0.19
APP-205ENST00000358918 ZNF579Q8NAF0 562 aaKnown RBP16.22■□□□□ 0.19
APP-205ENST00000358918 SPATA20Q8TB22 786 aa16.22■□□□□ 0.19
APP-205ENST00000358918 ABHD10Q9NUJ1 306 aa16.22■□□□□ 0.19
APP-205ENST00000358918 FAM169AQ9Y6X4 670 aa16.22■□□□□ 0.19
APP-205ENST00000358918 CYP19A1P11511 503 aaPredicted RBP16.22■□□□□ 0.19
APP-205ENST00000358918 GGCXP38435 758 aa16.22■□□□□ 0.19
APP-205ENST00000358918 HLFQ16534 295 aa16.22■□□□□ 0.19
APP-205ENST00000358918 LRRC24Q50LG9 513 aa16.22■□□□□ 0.19
APP-205ENST00000358918 APOA5Q6Q788 366 aa16.22■□□□□ 0.19
APP-205ENST00000358918 TRAPPC11Q7Z392 1133 aa16.22■□□□□ 0.19
APP-205ENST00000358918 POTEDQ86YR6 584 aa16.22■□□□□ 0.19
APP-205ENST00000358918 RIN2Q8WYP3 895 aaPredicted RBP16.22■□□□□ 0.19
APP-205ENST00000358918 FAM89AQ96GI7 184 aa16.22■□□□□ 0.19
APP-205ENST00000358918 CCDC85AQ96PX6 553 aaPredicted RBP16.22■□□□□ 0.19
APP-205ENST00000358918 SEC31BQ9NQW1 1179 aa16.22■□□□□ 0.19
APP-205ENST00000358918 ZC3H4Q9UPT8 1303 aaKnown RBP16.22■□□□□ 0.19
APP-205ENST00000358918 NWD2Q9ULI1 1742 aa16.21■□□□□ 0.19
APP-205ENST00000358918 GOLGA6CA6NDK9 693 aa16.21■□□□□ 0.19
APP-205ENST00000358918 GOLGA6DP0CG33 693 aa16.21■□□□□ 0.19
APP-205ENST00000358918 MNAT1P51948 309 aa16.21■□□□□ 0.19
APP-205ENST00000358918 GSCP56915 257 aaPredicted RBP16.21■□□□□ 0.19
APP-205ENST00000358918 APPBP2Q92624 585 aa16.21■□□□□ 0.19
APP-205ENST00000358918 KAT2BQ92831 832 aa16.21■□□□□ 0.19
APP-205ENST00000358918 SLF1Q9BQI6 1058 aa16.21■□□□□ 0.19
APP-205ENST00000358918 KAT14Q9H8E8 782 aa16.21■□□□□ 0.19
APP-205ENST00000358918 GOLGA6AQ9NYA3 693 aa16.21■□□□□ 0.19
APP-205ENST00000358918 ZBTB1Q9Y2K1 713 aa16.21■□□□□ 0.19
APP-205ENST00000358918 SHTN1A0MZ66 631 aa16.21■□□□□ 0.19
APP-205ENST00000358918 GOLGA8AA7E2F4 631 aa16.21■□□□□ 0.19
APP-205ENST00000358918 ZBTB43O43298 467 aa16.21■□□□□ 0.19
APP-205ENST00000358918 GPTP24298 496 aa16.21■□□□□ 0.19
APP-205ENST00000358918 IRAK1P51617 712 aa16.21■□□□□ 0.19
APP-205ENST00000358918 CKAP4Q07065 602 aaKnown RBP16.21■□□□□ 0.19
APP-205ENST00000358918 NFXL1Q6ZNB6 911 aa16.21■□□□□ 0.19
APP-205ENST00000358918 WASF1Q92558 559 aa16.21■□□□□ 0.19
APP-205ENST00000358918 RPGRIP1Q96KN7 1286 aa16.21■□□□□ 0.19
APP-205ENST00000358918 NUP88Q99567 741 aaPredicted RBP16.21■□□□□ 0.19
APP-205ENST00000358918 SPEF2Q9C093 1822 aa16.21■□□□□ 0.18
APP-205ENST00000358918 SPATA31A1Q5TZJ5 1347 aa16.21■□□□□ 0.18
APP-205ENST00000358918 UBN2Q6ZU65 1347 aa16.21■□□□□ 0.18
APP-205ENST00000358918 SSRP1Q08945 709 aaKnown RBP16.2■□□□□ 0.18
APP-205ENST00000358918 PPFIA1Q13136 1202 aa16.2■□□□□ 0.18
APP-205ENST00000358918 CUL4BQ13620 913 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms