RNA–Protein interactions for RNA: ENST00000358779.9

CDK11A-204, Transcript of cyclin dependent kinase 11A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK11A, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-204ENST00000358779 ACSBG1Q96GR2 724 aa20.29■□□□□ 0.84
CDK11A-204ENST00000358779 SAMSN1Q9NSI8 373 aaKnown RBP20.29■□□□□ 0.84
CDK11A-204ENST00000358779 A0A087X0B3 334 aa20.29■□□□□ 0.84
CDK11A-204ENST00000358779 PRPF3O43395 683 aaKnown RBP20.29■□□□□ 0.84
CDK11A-204ENST00000358779 STX10O60499 249 aa20.29■□□□□ 0.84
CDK11A-204ENST00000358779 PRDM1O75626 825 aa20.29■□□□□ 0.84
CDK11A-204ENST00000358779 PLEKHA8P1O95397 391 aa20.29■□□□□ 0.84
CDK11A-204ENST00000358779 IFIT1BQ5T764 474 aaKnown RBP20.29■□□□□ 0.84
CDK11A-204ENST00000358779 CATIPQ7Z7H3 387 aa20.29■□□□□ 0.84
CDK11A-204ENST00000358779 CCDC34Q96HJ3 373 aa20.29■□□□□ 0.84
CDK11A-204ENST00000358779 FAM53CQ9NYF3 392 aa20.29■□□□□ 0.84
CDK11A-204ENST00000358779 SRRTQ9BXP5 876 aaKnown RBP20.28■□□□□ 0.84
CDK11A-204ENST00000358779 RBM28Q9NW13 759 aaKnown RBP20.28■□□□□ 0.84
CDK11A-204ENST00000358779 ZNF446Q9NWS9 450 aa20.28■□□□□ 0.84
CDK11A-204ENST00000358779 LAMB1P07942 1786 aa20.28■□□□□ 0.84
CDK11A-204ENST00000358779 CYP2D7A0A087X1C5 515 aa20.28■□□□□ 0.84
CDK11A-204ENST00000358779 hCG_1642624A0A1W2PR95 340 aa20.28■□□□□ 0.84
CDK11A-204ENST00000358779 GOLGA6L9A6NEM1 432 aa20.28■□□□□ 0.84
CDK11A-204ENST00000358779 ADKP55263 362 aaKnown RBP20.28■□□□□ 0.84
CDK11A-204ENST00000358779 DYNLL1P63167 89 aaKnown RBP20.28■□□□□ 0.84
CDK11A-204ENST00000358779 BRIP1Q9BX63 1249 aa20.28■□□□□ 0.84
CDK11A-204ENST00000358779 PARP3Q9Y6F1 533 aa20.28■□□□□ 0.84
CDK11A-204ENST00000358779 URI1O94763 535 aaPredicted RBP20.27■□□□□ 0.84
CDK11A-204ENST00000358779 ARHGAP29Q52LW3 1261 aa20.27■□□□□ 0.84
CDK11A-204ENST00000358779 ANKRD18AQ8IVF6 992 aa20.27■□□□□ 0.84
CDK11A-204ENST00000358779 EPSTI1Q96J88 318 aa20.27■□□□□ 0.84
CDK11A-204ENST00000358779 SLFN14P0C7P3 912 aa20.27■□□□□ 0.84
CDK11A-204ENST00000358779 UBE4AQ14139 1066 aa20.27■□□□□ 0.84
CDK11A-204ENST00000358779 MNS1Q8NEH6 495 aa20.27■□□□□ 0.84
CDK11A-204ENST00000358779 SYMPKQ92797 1274 aaKnown RBP20.27■□□□□ 0.84
CDK11A-204ENST00000358779 V9GY48 417 aaPredicted RBP20.27■□□□□ 0.84
CDK11A-204ENST00000358779 MYH13Q9UKX3 1938 aa20.27■□□□□ 0.84
CDK11A-204ENST00000358779 A0A1B0GTH6 734 aa20.26■□□□□ 0.83
CDK11A-204ENST00000358779 BMP15O95972 392 aa20.26■□□□□ 0.83
CDK11A-204ENST00000358779 AFMP43652 599 aa20.26■□□□□ 0.83
CDK11A-204ENST00000358779 NR1I3Q14994 352 aa20.26■□□□□ 0.83
CDK11A-204ENST00000358779 TOGARAM2Q6ZUX3 1019 aa20.26■□□□□ 0.83
CDK11A-204ENST00000358779 SH3RF1Q7Z6J0 888 aa20.26■□□□□ 0.83
CDK11A-204ENST00000358779 IQCA1Q86XH1 822 aa20.26■□□□□ 0.83
CDK11A-204ENST00000358779 FERMT2Q96AC1 680 aa20.26■□□□□ 0.83
CDK11A-204ENST00000358779 BRMS1Q9HCU9 246 aa20.26■□□□□ 0.83
CDK11A-204ENST00000358779 ROBO1Q9Y6N7 1651 aa20.26■□□□□ 0.83
CDK11A-204ENST00000358779 SYNRGQ9UMZ2 1314 aa20.26■□□□□ 0.83
CDK11A-204ENST00000358779 COL5A3P25940 1745 aaPredicted RBP20.26■□□□□ 0.83
CDK11A-204ENST00000358779 CALM1P0DP23 149 aa20.26■□□□□ 0.83
CDK11A-204ENST00000358779 CALM2P0DP24 149 aa20.26■□□□□ 0.83
CDK11A-204ENST00000358779 CALM3P0DP25 149 aa20.26■□□□□ 0.83
CDK11A-204ENST00000358779 DDB1Q16531 1140 aa20.26■□□□□ 0.83
CDK11A-204ENST00000358779 CT47A1Q5JQC4 288 aaPredicted RBP20.26■□□□□ 0.83
CDK11A-204ENST00000358779 FAM177A1Q8N128 213 aaPredicted RBP20.26■□□□□ 0.83
CDK11A-204ENST00000358779 PAGE5Q96GU1 130 aa20.26■□□□□ 0.83
CDK11A-204ENST00000358779 CDCA7Q9BWT1 371 aaPredicted RBP20.26■□□□□ 0.83
CDK11A-204ENST00000358779 ZNF652Q9Y2D9 606 aa20.26■□□□□ 0.83
CDK11A-204ENST00000358779 WTIPA6NIX2 430 aaPredicted RBP20.25■□□□□ 0.83
CDK11A-204ENST00000358779 WNT7AO00755 349 aa20.25■□□□□ 0.83
CDK11A-204ENST00000358779 CLCN6P51797 869 aa20.25■□□□□ 0.83
CDK11A-204ENST00000358779 TROAPQ12815 778 aa20.25■□□□□ 0.83
CDK11A-204ENST00000358779 IGSF3O75054 1194 aa20.25■□□□□ 0.83
CDK11A-204ENST00000358779 TADA3O75528 432 aa20.25■□□□□ 0.83
CDK11A-204ENST00000358779 DDAH1O94760 285 aa20.25■□□□□ 0.83
CDK11A-204ENST00000358779 PCP11498 1178 aaKnown RBP20.25■□□□□ 0.83
CDK11A-204ENST00000358779 CAVIN4Q5BKX8 364 aa20.25■□□□□ 0.83
CDK11A-204ENST00000358779 C3orf67Q6ZVT6 689 aa20.25■□□□□ 0.83
CDK11A-204ENST00000358779 TMTC3Q6ZXV5 915 aa20.25■□□□□ 0.83
CDK11A-204ENST00000358779 UBXN4Q92575 508 aa20.25■□□□□ 0.83
CDK11A-204ENST00000358779 TNFRSF25Q93038 417 aa20.25■□□□□ 0.83
CDK11A-204ENST00000358779 NRAPQ86VF7 1730 aa20.24■□□□□ 0.83
CDK11A-204ENST00000358779 CNTNAP5Q8WYK1 1306 aa20.24■□□□□ 0.83
CDK11A-204ENST00000358779 KIF20AO95235 890 aa20.24■□□□□ 0.83
CDK11A-204ENST00000358779 FGRP09769 529 aa20.24■□□□□ 0.83
CDK11A-204ENST00000358779 CUL4BQ13620 913 aa20.24■□□□□ 0.83
CDK11A-204ENST00000358779 ERFEQ4G0M1 354 aa20.24■□□□□ 0.83
CDK11A-204ENST00000358779 SPATA1Q5VX52 437 aa20.24■□□□□ 0.83
CDK11A-204ENST00000358779 ZNF384Q8TF68 577 aa20.24■□□□□ 0.83
CDK11A-204ENST00000358779 CARD6Q9BX69 1037 aa20.24■□□□□ 0.83
CDK11A-204ENST00000358779 CD44P16070 742 aaKnown RBP20.24■□□□□ 0.83
CDK11A-204ENST00000358779 CASP1P29466 404 aa20.24■□□□□ 0.83
CDK11A-204ENST00000358779 DPYDQ12882 1025 aa20.24■□□□□ 0.83
CDK11A-204ENST00000358779 NPY5RQ15761 445 aa20.24■□□□□ 0.83
CDK11A-204ENST00000358779 NOM1Q5C9Z4 860 aaKnown RBP20.24■□□□□ 0.83
CDK11A-204ENST00000358779 TTC38Q5R3I4 469 aa20.24■□□□□ 0.83
CDK11A-204ENST00000358779 KLHL10Q6JEL2 608 aa20.24■□□□□ 0.83
CDK11A-204ENST00000358779 CTR9Q6PD62 1173 aa20.24■□□□□ 0.83
CDK11A-204ENST00000358779 APTXQ7Z2E3 356 aaKnown RBP20.24■□□□□ 0.83
CDK11A-204ENST00000358779 BSDC1Q9NW68 430 aaPredicted RBP20.24■□□□□ 0.83
CDK11A-204ENST00000358779 CASQ1P31415 396 aa20.23■□□□□ 0.83
CDK11A-204ENST00000358779 GNG11P61952 73 aa20.23■□□□□ 0.83
CDK11A-204ENST00000358779 ZNF174Q15697 407 aa20.23■□□□□ 0.83
CDK11A-204ENST00000358779 WDR24Q96S15 920 aa20.23■□□□□ 0.83
CDK11A-204ENST00000358779 EFCAB8A8MWE9 144 aa20.23■□□□□ 0.83
CDK11A-204ENST00000358779 AKR1B15C9JRZ8 316 aaPredicted RBP20.23■□□□□ 0.83
CDK11A-204ENST00000358779 BMS1Q14692 1282 aaKnown RBP20.23■□□□□ 0.83
CDK11A-204ENST00000358779 GSDMAQ96QA5 445 aa20.23■□□□□ 0.83
CDK11A-204ENST00000358779 SPATA31A1Q5TZJ5 1347 aa20.22■□□□□ 0.83
CDK11A-204ENST00000358779 STX17P56962 302 aa20.22■□□□□ 0.83
CDK11A-204ENST00000358779 SF3B3Q15393 1217 aaKnown RBP20.22■□□□□ 0.83
CDK11A-204ENST00000358779 MARCH10Q8NA82 808 aaPredicted RBP20.22■□□□□ 0.83
CDK11A-204ENST00000358779 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.22■□□□□ 0.83
CDK11A-204ENST00000358779 TEX33O43247 280 aa20.22■□□□□ 0.83
CDK11A-204ENST00000358779 ATP2C1P98194 919 aaPredicted RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms