RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 CHMLP26374 656 aa12.36□□□□□ -0.43
COL11A1-202ENST00000358392 ATICP31939 592 aa12.36□□□□□ -0.43
COL11A1-202ENST00000358392 HP1BP3Q5SSJ5 553 aaPredicted RBP12.36□□□□□ -0.43
COL11A1-202ENST00000358392 U2AF1L4Q8WU68 220 aaKnown RBP12.36□□□□□ -0.43
COL11A1-202ENST00000358392 ABTB1Q969K4 478 aaPredicted RBP12.36□□□□□ -0.43
COL11A1-202ENST00000358392 ST7Q9NRC1 585 aa12.36□□□□□ -0.43
COL11A1-202ENST00000358392 KCNK3O14649 394 aa12.36□□□□□ -0.43
COL11A1-202ENST00000358392 HMGB2P26583 209 aaKnown RBP12.36□□□□□ -0.43
COL11A1-202ENST00000358392 SKA2Q8WVK7 121 aaPredicted RBP12.36□□□□□ -0.43
COL11A1-202ENST00000358392 RIOK1Q9BRS2 568 aaKnown RBP12.36□□□□□ -0.43
COL11A1-202ENST00000358392 MED10Q9BTT4 135 aa12.36□□□□□ -0.43
COL11A1-202ENST00000358392 SMYD2Q9NRG4 433 aa12.36□□□□□ -0.43
COL11A1-202ENST00000358392 KRT24Q2M2I5 525 aa12.36□□□□□ -0.43
COL11A1-202ENST00000358392 MMEL1Q495T6 779 aa12.36□□□□□ -0.43
COL11A1-202ENST00000358392 CEP85Q6P2H3 762 aa12.36□□□□□ -0.43
COL11A1-202ENST00000358392 C2CD5Q86YS7 1000 aa12.36□□□□□ -0.43
COL11A1-202ENST00000358392 ZCRB1Q8TBF4 217 aaKnown RBP12.36□□□□□ -0.43
COL11A1-202ENST00000358392 USP26Q9BXU7 913 aa12.36□□□□□ -0.43
COL11A1-202ENST00000358392 MTMR3Q13615 1198 aa12.36□□□□□ -0.43
COL11A1-202ENST00000358392 PRKG1Q13976 671 aa12.36□□□□□ -0.43
COL11A1-202ENST00000358392 CCDC93Q567U6 631 aa12.36□□□□□ -0.43
COL11A1-202ENST00000358392 HERC4Q5GLZ8 1057 aaPredicted RBP12.36□□□□□ -0.43
COL11A1-202ENST00000358392 KSR2Q6VAB6 950 aa12.36□□□□□ -0.43
COL11A1-202ENST00000358392 FAM71BQ8TC56 605 aa12.36□□□□□ -0.43
COL11A1-202ENST00000358392 SNX29Q8TEQ0 813 aa12.36□□□□□ -0.43
COL11A1-202ENST00000358392 DESI2Q9BSY9 194 aa12.36□□□□□ -0.43
COL11A1-202ENST00000358392 MAGED2Q9UNF1 606 aaPredicted RBP12.36□□□□□ -0.43
COL11A1-202ENST00000358392 PPFIA1Q13136 1202 aa12.36□□□□□ -0.43
COL11A1-202ENST00000358392 SMC5Q8IY18 1101 aa12.36□□□□□ -0.43
COL11A1-202ENST00000358392 IFIH1Q9BYX4 1025 aaKnown RBP12.36□□□□□ -0.43
COL11A1-202ENST00000358392 SLC27A2O14975 620 aa12.35□□□□□ -0.43
COL11A1-202ENST00000358392 EXOC3O60645 756 aa12.35□□□□□ -0.43
COL11A1-202ENST00000358392 APOEP02649 317 aa12.35□□□□□ -0.43
COL11A1-202ENST00000358392 POSTNQ15063 836 aa12.35□□□□□ -0.43
COL11A1-202ENST00000358392 NUP58Q9BVL2 599 aa12.35□□□□□ -0.43
COL11A1-202ENST00000358392 LRCH2Q5VUJ6 765 aa12.35□□□□□ -0.43
COL11A1-202ENST00000358392 SYCE1Q8N0S2 351 aa12.35□□□□□ -0.43
COL11A1-202ENST00000358392 ESYT2A0FGR8 921 aa12.35□□□□□ -0.43
COL11A1-202ENST00000358392 ADCY8P40145 1251 aa12.35□□□□□ -0.43
COL11A1-202ENST00000358392 TTC38Q5R3I4 469 aa12.35□□□□□ -0.43
COL11A1-202ENST00000358392 KLHL14Q9P2G3 628 aa12.35□□□□□ -0.43
COL11A1-202ENST00000358392 KCNJ14Q9UNX9 436 aa12.35□□□□□ -0.43
COL11A1-202ENST00000358392 MSH6P52701 1360 aa12.35□□□□□ -0.43
COL11A1-202ENST00000358392 ADCY1Q08828 1119 aa12.35□□□□□ -0.43
COL11A1-202ENST00000358392 TEX11Q8IYF3 940 aa12.35□□□□□ -0.43
COL11A1-202ENST00000358392 EXOC7Q9UPT5 735 aa12.35□□□□□ -0.43
COL11A1-202ENST00000358392 ACEP12821 1306 aa12.35□□□□□ -0.43
COL11A1-202ENST00000358392 ATF7P17544 494 aaPredicted RBP12.35□□□□□ -0.43
COL11A1-202ENST00000358392 CALCRLQ16602 461 aa12.35□□□□□ -0.43
COL11A1-202ENST00000358392 RASIP1Q5U651 963 aa12.35□□□□□ -0.43
COL11A1-202ENST00000358392 RPAINQ86UA6 219 aa12.35□□□□□ -0.43
COL11A1-202ENST00000358392 PLEKHM2Q8IWE5 1019 aa12.35□□□□□ -0.43
COL11A1-202ENST00000358392 NAP1L4Q99733 375 aaKnown RBP12.35□□□□□ -0.43
COL11A1-202ENST00000358392 TRIM56Q9BRZ2 755 aaKnown RBP12.35□□□□□ -0.43
COL11A1-202ENST00000358392 CARD10Q9BWT7 1032 aa12.35□□□□□ -0.43
COL11A1-202ENST00000358392 PTPN22Q9Y2R2 807 aa12.35□□□□□ -0.43
COL11A1-202ENST00000358392 PRDM1O75626 825 aa12.35□□□□□ -0.43
COL11A1-202ENST00000358392 TNNI1P19237 187 aa12.35□□□□□ -0.43
COL11A1-202ENST00000358392 RCN2Q14257 317 aa12.35□□□□□ -0.43
COL11A1-202ENST00000358392 NDUFB9Q9Y6M9 179 aa12.35□□□□□ -0.43
COL11A1-202ENST00000358392 ABCC5O15440 1437 aa12.35□□□□□ -0.43
COL11A1-202ENST00000358392 BCRP11274 1271 aa12.34□□□□□ -0.43
COL11A1-202ENST00000358392 SLC12A1Q13621 1099 aa12.34□□□□□ -0.43
COL11A1-202ENST00000358392 HELLSQ9NRZ9 838 aa12.34□□□□□ -0.43
COL11A1-202ENST00000358392 SYNJ2BP-COX16A0A087WUM0 186 aa12.34□□□□□ -0.43
COL11A1-202ENST00000358392 HIP1RO75146 1068 aa12.34□□□□□ -0.43
COL11A1-202ENST00000358392 DEXIO95424 95 aa12.34□□□□□ -0.43
COL11A1-202ENST00000358392 HAUS3Q68CZ6 603 aa12.34□□□□□ -0.43
COL11A1-202ENST00000358392 COX16Q9P0S2 106 aa12.34□□□□□ -0.43
COL11A1-202ENST00000358392 PPP1R9AQ9ULJ8 1098 aa12.34□□□□□ -0.43
COL11A1-202ENST00000358392 KRIT1O00522 736 aa12.34□□□□□ -0.43
COL11A1-202ENST00000358392 GNL1P36915 607 aaPredicted RBP12.34□□□□□ -0.43
COL11A1-202ENST00000358392 NUB1Q9Y5A7 615 aa12.34□□□□□ -0.43
COL11A1-202ENST00000358392 TTC41PQ6P2S7 1318 aa12.34□□□□□ -0.43
COL11A1-202ENST00000358392 CDK13Q14004 1512 aaKnown RBP12.34□□□□□ -0.43
COL11A1-202ENST00000358392 CYP2J2P51589 502 aa12.34□□□□□ -0.43
COL11A1-202ENST00000358392 NFATC2IPQ8NCF5 419 aa12.34□□□□□ -0.43
COL11A1-202ENST00000358392 LRRC59Q96AG4 307 aaKnown RBP12.34□□□□□ -0.43
COL11A1-202ENST00000358392 RAB17Q9H0T7 212 aa12.34□□□□□ -0.43
COL11A1-202ENST00000358392 AATFQ9NY61 560 aaKnown RBP eCLIP12.34□□□□□ -0.43
COL11A1-202ENST00000358392 RFX1P22670 979 aa12.34□□□□□ -0.43
COL11A1-202ENST00000358392 TUBB2AQ13885 445 aa12.34□□□□□ -0.43
COL11A1-202ENST00000358392 LRGUKQ96M69 825 aa12.34□□□□□ -0.43
COL11A1-202ENST00000358392 TUBB2BQ9BVA1 445 aa12.34□□□□□ -0.43
COL11A1-202ENST00000358392 GPHNQ9NQX3 736 aaPredicted RBP12.34□□□□□ -0.43
COL11A1-202ENST00000358392 NFE2L3Q9Y4A8 694 aa12.34□□□□□ -0.43
COL11A1-202ENST00000358392 FBXO31Q5XUX0 539 aaPredicted RBP12.34□□□□□ -0.43
COL11A1-202ENST00000358392 HDAC11Q96DB2 347 aa12.34□□□□□ -0.43
COL11A1-202ENST00000358392 NCAPGQ9BPX3 1015 aa12.34□□□□□ -0.43
COL11A1-202ENST00000358392 AMFRQ9UKV5 643 aa12.34□□□□□ -0.43
COL11A1-202ENST00000358392 PLCG2P16885 1265 aa12.33□□□□□ -0.43
COL11A1-202ENST00000358392 PHLDB3Q6NSJ2 640 aa12.33□□□□□ -0.43
COL11A1-202ENST00000358392 CDC37L1Q7L3B6 337 aa12.33□□□□□ -0.43
COL11A1-202ENST00000358392 PCDHB13Q9Y5F0 798 aa12.33□□□□□ -0.43
COL11A1-202ENST00000358392 PLCB4Q15147 1175 aa12.33□□□□□ -0.44
COL11A1-202ENST00000358392 CPXCR1Q8N123 301 aa12.33□□□□□ -0.44
COL11A1-202ENST00000358392 PICK1Q9NRD5 415 aa12.33□□□□□ -0.44
COL11A1-202ENST00000358392 THAP12O43422 761 aa12.33□□□□□ -0.44
COL11A1-202ENST00000358392 TMED1Q13445 227 aa12.33□□□□□ -0.44
COL11A1-202ENST00000358392 TMTC1Q8IUR5 882 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms