RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 KDM4CQ9H3R0 1056 aa10.59□□□□□ -0.71
SMARCAL1-202ENST00000358207 ABCB6Q9NP58 842 aa10.59□□□□□ -0.71
SMARCAL1-202ENST00000358207 MTMR6Q9Y217 621 aa10.59□□□□□ -0.71
SMARCAL1-202ENST00000358207 ARAP2Q8WZ64 1704 aa10.59□□□□□ -0.71
SMARCAL1-202ENST00000358207 TAF1P21675 1872 aa10.58□□□□□ -0.72
SMARCAL1-202ENST00000358207 ENO4A6NNW6 628 aa10.58□□□□□ -0.72
SMARCAL1-202ENST00000358207 TUBB4AP04350 444 aa10.58□□□□□ -0.72
SMARCAL1-202ENST00000358207 SRGNP10124 158 aa10.58□□□□□ -0.72
SMARCAL1-202ENST00000358207 TBC1D9BQ66K14 1250 aa10.58□□□□□ -0.72
SMARCAL1-202ENST00000358207 FAM173BQ6P4H8 233 aa10.58□□□□□ -0.72
SMARCAL1-202ENST00000358207 LMBR1LQ6UX01 489 aa10.58□□□□□ -0.72
SMARCAL1-202ENST00000358207 MSL3Q8N5Y2 521 aaKnown RBP10.58□□□□□ -0.72
SMARCAL1-202ENST00000358207 SMC1BQ8NDV3 1235 aa10.58□□□□□ -0.72
SMARCAL1-202ENST00000358207 HNRNPLLQ8WVV9 542 aaKnown RBP10.58□□□□□ -0.72
SMARCAL1-202ENST00000358207 MASTLQ96GX5 879 aa10.58□□□□□ -0.72
SMARCAL1-202ENST00000358207 PNKPQ96T60 521 aa10.58□□□□□ -0.72
SMARCAL1-202ENST00000358207 RABEP2Q9H5N1 569 aa10.58□□□□□ -0.72
SMARCAL1-202ENST00000358207 ANKZF1Q9H8Y5 726 aa10.58□□□□□ -0.72
SMARCAL1-202ENST00000358207 TMCO5BA8MYB1 307 aa10.58□□□□□ -0.72
SMARCAL1-202ENST00000358207 H0YIN7 160 aa10.58□□□□□ -0.72
SMARCAL1-202ENST00000358207 EBAG9O00559 213 aa10.58□□□□□ -0.72
SMARCAL1-202ENST00000358207 ARMCX6Q7L4S7 300 aa10.58□□□□□ -0.72
SMARCAL1-202ENST00000358207 SPDYE1Q8NFV5 336 aaPredicted RBP10.58□□□□□ -0.72
SMARCAL1-202ENST00000358207 CLSTN2Q9H4D0 955 aa10.58□□□□□ -0.72
SMARCAL1-202ENST00000358207 RTEL1Q9NZ71 1219 aa10.58□□□□□ -0.72
SMARCAL1-202ENST00000358207 G3BP2Q9UN86 482 aaKnown RBP10.58□□□□□ -0.72
SMARCAL1-202ENST00000358207 MRFAP1Q9Y605 127 aa10.58□□□□□ -0.72
SMARCAL1-202ENST00000358207 ECM29Q5VYK3 1845 aa10.58□□□□□ -0.72
SMARCAL1-202ENST00000358207 GOLGA6L19H0YKK7 550 aa10.57□□□□□ -0.72
SMARCAL1-202ENST00000358207 KCNB1Q14721 858 aa10.57□□□□□ -0.72
SMARCAL1-202ENST00000358207 WDR24Q96S15 920 aa10.57□□□□□ -0.72
SMARCAL1-202ENST00000358207 PPFIA2O75334 1257 aa10.57□□□□□ -0.72
SMARCAL1-202ENST00000358207 NR1I2O75469 434 aa10.57□□□□□ -0.72
SMARCAL1-202ENST00000358207 PRPF6O94906 941 aaKnown RBP10.57□□□□□ -0.72
SMARCAL1-202ENST00000358207 NPR1P16066 1061 aa10.57□□□□□ -0.72
SMARCAL1-202ENST00000358207 GSDMDP57764 484 aa10.57□□□□□ -0.72
SMARCAL1-202ENST00000358207 SLC10A5Q5PT55 438 aa10.57□□□□□ -0.72
SMARCAL1-202ENST00000358207 C2CD5Q86YS7 1000 aa10.57□□□□□ -0.72
SMARCAL1-202ENST00000358207 AMOTL1Q8IY63 956 aa10.57□□□□□ -0.72
SMARCAL1-202ENST00000358207 FAM177A1Q8N128 213 aaPredicted RBP10.57□□□□□ -0.72
SMARCAL1-202ENST00000358207 RHPN1Q8TCX5 695 aa10.57□□□□□ -0.72
SMARCAL1-202ENST00000358207 ZSWIM4Q9H7M6 989 aa10.57□□□□□ -0.72
SMARCAL1-202ENST00000358207 TLR7Q9NYK1 1049 aaKnown RBP10.57□□□□□ -0.72
SMARCAL1-202ENST00000358207 BCS1LQ9Y276 419 aa10.57□□□□□ -0.72
SMARCAL1-202ENST00000358207 PCDHGA4Q9Y5G9 962 aa10.57□□□□□ -0.72
SMARCAL1-202ENST00000358207 ATP6V1DQ9Y5K8 247 aa10.57□□□□□ -0.72
SMARCAL1-202ENST00000358207 A0A1B0GUA9 196 aa10.56□□□□□ -0.72
SMARCAL1-202ENST00000358207 KCNJ6P48051 423 aa10.56□□□□□ -0.72
SMARCAL1-202ENST00000358207 PDE1AP54750 535 aa10.56□□□□□ -0.72
SMARCAL1-202ENST00000358207 NAP1L1P55209 391 aaKnown RBP10.56□□□□□ -0.72
SMARCAL1-202ENST00000358207 CASP8Q14790 479 aa10.56□□□□□ -0.72
SMARCAL1-202ENST00000358207 NAA25Q14CX7 972 aa10.56□□□□□ -0.72
SMARCAL1-202ENST00000358207 DHX40Q8IX18 779 aaKnown RBP10.56□□□□□ -0.72
SMARCAL1-202ENST00000358207 EDC3Q96F86 508 aaKnown RBP10.56□□□□□ -0.72
SMARCAL1-202ENST00000358207 BIN2Q9UBW5 565 aaPredicted RBP10.56□□□□□ -0.72
SMARCAL1-202ENST00000358207 CDHR2Q9BYE9 1310 aa10.56□□□□□ -0.72
SMARCAL1-202ENST00000358207 LRRIQ3A6PVS8 624 aaPredicted RBP10.56□□□□□ -0.72
SMARCAL1-202ENST00000358207 RNF40O75150 1001 aa10.56□□□□□ -0.72
SMARCAL1-202ENST00000358207 SYF2O95926 243 aaKnown RBP10.56□□□□□ -0.72
SMARCAL1-202ENST00000358207 USP5P45974 858 aa10.56□□□□□ -0.72
SMARCAL1-202ENST00000358207 USP4Q13107 963 aa10.56□□□□□ -0.72
SMARCAL1-202ENST00000358207 RPUSD2Q8IZ73 545 aaKnown RBP10.56□□□□□ -0.72
SMARCAL1-202ENST00000358207 PLBD2Q8NHP8 589 aa10.56□□□□□ -0.72
SMARCAL1-202ENST00000358207 AFAP1L1Q8TED9 768 aa10.56□□□□□ -0.72
SMARCAL1-202ENST00000358207 SPDL1Q96EA4 605 aa10.56□□□□□ -0.72
SMARCAL1-202ENST00000358207 COL4A5P29400 1685 aa10.56□□□□□ -0.72
SMARCAL1-202ENST00000358207 PASKQ96RG2 1323 aa10.56□□□□□ -0.72
SMARCAL1-202ENST00000358207 POTECB2RU33 542 aa10.56□□□□□ -0.72
SMARCAL1-202ENST00000358207 EIF3JO75822 258 aaKnown RBP10.56□□□□□ -0.72
SMARCAL1-202ENST00000358207 THEMIS2Q5TEJ8 643 aa10.56□□□□□ -0.72
SMARCAL1-202ENST00000358207 FAM228AQ86W67 206 aa10.56□□□□□ -0.72
SMARCAL1-202ENST00000358207 GOLGA1Q92805 767 aa10.56□□□□□ -0.72
SMARCAL1-202ENST00000358207 NYXQ9GZU5 481 aa10.56□□□□□ -0.72
SMARCAL1-202ENST00000358207 MAP3K15Q6ZN16 1313 aa10.55□□□□□ -0.72
SMARCAL1-202ENST00000358207 SHOX2O60902 331 aaPredicted RBP10.55□□□□□ -0.72
SMARCAL1-202ENST00000358207 FSBPO95073 299 aa10.55□□□□□ -0.72
SMARCAL1-202ENST00000358207 CHGBP05060 677 aa10.55□□□□□ -0.72
SMARCAL1-202ENST00000358207 ABCD1P33897 745 aa10.55□□□□□ -0.72
SMARCAL1-202ENST00000358207 ARHGAP27Q6ZUM4 889 aa10.55□□□□□ -0.72
SMARCAL1-202ENST00000358207 AACSQ86V21 672 aa10.55□□□□□ -0.72
SMARCAL1-202ENST00000358207 SSH3Q8TE77 659 aa10.55□□□□□ -0.72
SMARCAL1-202ENST00000358207 KLRG1Q96E93 195 aa10.55□□□□□ -0.72
SMARCAL1-202ENST00000358207 KLC4Q9NSK0 619 aa10.55□□□□□ -0.72
SMARCAL1-202ENST00000358207 RAB21Q9UL25 225 aa10.55□□□□□ -0.72
SMARCAL1-202ENST00000358207 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.55□□□□□ -0.72
SMARCAL1-202ENST00000358207 VWA3AA6NCI4 1184 aa10.55□□□□□ -0.72
SMARCAL1-202ENST00000358207 PYGBP11216 843 aa10.55□□□□□ -0.72
SMARCAL1-202ENST00000358207 KIF6Q6ZMV9 814 aa10.55□□□□□ -0.72
SMARCAL1-202ENST00000358207 DZIP3Q86Y13 1208 aaKnown RBP10.55□□□□□ -0.72
SMARCAL1-202ENST00000358207 ACBD3Q9H3P7 528 aa10.55□□□□□ -0.72
SMARCAL1-202ENST00000358207 KAT14Q9H8E8 782 aa10.55□□□□□ -0.72
SMARCAL1-202ENST00000358207 SMC3Q9UQE7 1217 aa10.55□□□□□ -0.72
SMARCAL1-202ENST00000358207 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.55□□□□□ -0.72
SMARCAL1-202ENST00000358207 COL4A1P02462 1669 aa10.54□□□□□ -0.72
SMARCAL1-202ENST00000358207 PDHBP11177 359 aa10.54□□□□□ -0.72
SMARCAL1-202ENST00000358207 FKBP4Q02790 459 aaKnown RBP eCLIP10.54□□□□□ -0.72
SMARCAL1-202ENST00000358207 PDCD2Q16342 344 aaPredicted RBP10.54□□□□□ -0.72
SMARCAL1-202ENST00000358207 HSP90B2PQ58FF3 399 aa10.54□□□□□ -0.72
SMARCAL1-202ENST00000358207 CEP57Q86XR8 500 aa10.54□□□□□ -0.72
SMARCAL1-202ENST00000358207 ZNF34Q8IZ26 560 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms