RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 TRAPPC3LQ5T215 181 aa10.8□□□□□ -0.68
CHD3-202ENST00000358181 RSAD2Q8WXG1 361 aa10.8□□□□□ -0.68
CHD3-202ENST00000358181 DCPSQ96C86 337 aaKnown RBP10.8□□□□□ -0.68
CHD3-202ENST00000358181 DDAH1O94760 285 aa10.8□□□□□ -0.68
CHD3-202ENST00000358181 KIF11P52732 1056 aa10.8□□□□□ -0.68
CHD3-202ENST00000358181 DDB1Q16531 1140 aa10.8□□□□□ -0.68
CHD3-202ENST00000358181 RAPH1Q70E73 1250 aa10.8□□□□□ -0.68
CHD3-202ENST00000358181 PPHLN1Q8NEY8 458 aaKnown RBP10.8□□□□□ -0.68
CHD3-202ENST00000358181 ATP6V0A1Q93050 837 aa10.8□□□□□ -0.68
CHD3-202ENST00000358181 TRAF5O00463 557 aa10.8□□□□□ -0.68
CHD3-202ENST00000358181 BAG2O95816 211 aa10.8□□□□□ -0.68
CHD3-202ENST00000358181 ARHGEF16Q5VV41 709 aa10.8□□□□□ -0.68
CHD3-202ENST00000358181 ASIC3Q9UHC3 531 aa10.8□□□□□ -0.68
CHD3-202ENST00000358181 THOC2Q8NI27 1593 aaKnown RBP10.8□□□□□ -0.68
CHD3-202ENST00000358181 TESPA1A2RU30 521 aaPredicted RBP10.79□□□□□ -0.68
CHD3-202ENST00000358181 ADCY5O95622 1261 aa10.79□□□□□ -0.68
CHD3-202ENST00000358181 DZIP3Q86Y13 1208 aaKnown RBP10.79□□□□□ -0.68
CHD3-202ENST00000358181 CLCA2Q9UQC9 943 aa10.79□□□□□ -0.68
CHD3-202ENST00000358181 VGLL3A8MV65 326 aa10.79□□□□□ -0.68
CHD3-202ENST00000358181 H0YIN7 160 aa10.79□□□□□ -0.68
CHD3-202ENST00000358181 MAP3K7O43318 606 aa10.79□□□□□ -0.68
CHD3-202ENST00000358181 MYCT1Q8N699 235 aa10.79□□□□□ -0.68
CHD3-202ENST00000358181 CFAP36Q96G28 342 aa10.79□□□□□ -0.68
CHD3-202ENST00000358181 STK38LQ9Y2H1 464 aa10.79□□□□□ -0.68
CHD3-202ENST00000358181 BUB1BO60566 1050 aaPredicted RBP10.79□□□□□ -0.68
CHD3-202ENST00000358181 UQCRFS1P1P0C7P4 283 aa10.79□□□□□ -0.68
CHD3-202ENST00000358181 CTAGE1Q96RT6 745 aa10.79□□□□□ -0.68
CHD3-202ENST00000358181 DNAI1Q9UI46 699 aa10.79□□□□□ -0.68
CHD3-202ENST00000358181 H7C1D1 291 aa10.79□□□□□ -0.68
CHD3-202ENST00000358181 ZNF174Q15697 407 aa10.79□□□□□ -0.68
CHD3-202ENST00000358181 ALDH1L2Q3SY69 923 aa10.79□□□□□ -0.68
CHD3-202ENST00000358181 BTN2A2Q8WVV5 523 aa10.79□□□□□ -0.68
CHD3-202ENST00000358181 TBC1D2Q9BYX2 928 aa10.79□□□□□ -0.68
CHD3-202ENST00000358181 ECHDC1Q9NTX5 307 aa10.79□□□□□ -0.68
CHD3-202ENST00000358181 PARP2Q9UGN5 583 aa10.79□□□□□ -0.68
CHD3-202ENST00000358181 KIAA0586Q9BVV6 1533 aa10.79□□□□□ -0.68
CHD3-202ENST00000358181 HIF1AQ16665 826 aa10.79□□□□□ -0.68
CHD3-202ENST00000358181 FASTKD5Q7L8L6 764 aaKnown RBP10.79□□□□□ -0.68
CHD3-202ENST00000358181 SULF1Q8IWU6 871 aa10.79□□□□□ -0.68
CHD3-202ENST00000358181 NIM1KQ8IY84 436 aa10.79□□□□□ -0.68
CHD3-202ENST00000358181 SDCCAG3Q96C92 435 aa10.79□□□□□ -0.68
CHD3-202ENST00000358181 HELLSQ9NRZ9 838 aa10.79□□□□□ -0.68
CHD3-202ENST00000358181 UTP11Q9Y3A2 253 aaKnown RBP10.79□□□□□ -0.68
CHD3-202ENST00000358181 ADRA2BP18089 450 aa10.79□□□□□ -0.68
CHD3-202ENST00000358181 TAOK1Q7L7X3 1001 aa10.79□□□□□ -0.68
CHD3-202ENST00000358181 OTULINQ96BN8 352 aa10.79□□□□□ -0.68
CHD3-202ENST00000358181 ABHD8Q96I13 439 aa10.79□□□□□ -0.68
CHD3-202ENST00000358181 FAM8A1Q9UBU6 413 aa10.79□□□□□ -0.68
CHD3-202ENST00000358181 CALUO43852 315 aaPredicted RBP10.78□□□□□ -0.68
CHD3-202ENST00000358181 ASIC2Q16515 512 aa10.78□□□□□ -0.68
CHD3-202ENST00000358181 MTHFSDQ2M296 383 aaKnown RBP10.78□□□□□ -0.68
CHD3-202ENST00000358181 APBA3O96018 575 aa10.78□□□□□ -0.68
CHD3-202ENST00000358181 HLA-DPA1P20036 260 aa10.78□□□□□ -0.68
CHD3-202ENST00000358181 GSDMDP57764 484 aa10.78□□□□□ -0.68
CHD3-202ENST00000358181 GIMAP6Q6P9H5 292 aa10.78□□□□□ -0.68
CHD3-202ENST00000358181 TSPYL6Q8N831 410 aa10.78□□□□□ -0.68
CHD3-202ENST00000358181 BTG4Q9NY30 223 aa10.78□□□□□ -0.68
CHD3-202ENST00000358181 APOEP02649 317 aa10.78□□□□□ -0.68
CHD3-202ENST00000358181 ATP1A2P50993 1020 aa10.78□□□□□ -0.68
CHD3-202ENST00000358181 BRF1Q92994 677 aa10.78□□□□□ -0.68
CHD3-202ENST00000358181 MAPK8IP1Q9UQF2 711 aa10.78□□□□□ -0.68
CHD3-202ENST00000358181 GCNT3O95395 438 aa10.78□□□□□ -0.68
CHD3-202ENST00000358181 CFBP00751 764 aa10.78□□□□□ -0.68
CHD3-202ENST00000358181 KRT15P19012 456 aa10.78□□□□□ -0.68
CHD3-202ENST00000358181 VCPP55072 806 aaKnown RBP10.78□□□□□ -0.68
CHD3-202ENST00000358181 PTPROQ16827 1216 aa10.78□□□□□ -0.68
CHD3-202ENST00000358181 ARHGAP44Q17R89 818 aa10.78□□□□□ -0.68
CHD3-202ENST00000358181 SLC9C2Q5TAH2 1124 aa10.78□□□□□ -0.68
CHD3-202ENST00000358181 TEX11Q8IYF3 940 aa10.78□□□□□ -0.68
CHD3-202ENST00000358181 AOPEPQ8N6M6 819 aa10.78□□□□□ -0.68
CHD3-202ENST00000358181 RBSNQ9H1K0 784 aa10.78□□□□□ -0.68
CHD3-202ENST00000358181 HPS4Q9NQG7 708 aa10.78□□□□□ -0.68
CHD3-202ENST00000358181 EXOC7Q9UPT5 735 aa10.78□□□□□ -0.68
CHD3-202ENST00000358181 LUC7L2Q9Y383 392 aaKnown RBP10.78□□□□□ -0.68
CHD3-202ENST00000358181 DPP9Q86TI2 863 aa10.78□□□□□ -0.68
CHD3-202ENST00000358181 RSRC1Q96IZ7 334 aaKnown RBP10.78□□□□□ -0.68
CHD3-202ENST00000358181 RAD18Q9NS91 495 aa10.78□□□□□ -0.68
CHD3-202ENST00000358181 OPHN1O60890 802 aa10.77□□□□□ -0.68
CHD3-202ENST00000358181 STAM2O75886 525 aa10.77□□□□□ -0.68
CHD3-202ENST00000358181 ATP5DP30049 168 aa10.77□□□□□ -0.68
CHD3-202ENST00000358181 EIF4A2Q14240 407 aaKnown RBP10.77□□□□□ -0.68
CHD3-202ENST00000358181 DBN1Q16643 649 aa10.77□□□□□ -0.68
CHD3-202ENST00000358181 LONRF3Q496Y0 759 aa10.77□□□□□ -0.68
CHD3-202ENST00000358181 KAZNQ674X7 775 aa10.77□□□□□ -0.68
CHD3-202ENST00000358181 DTHD1Q6ZMT9 781 aa10.77□□□□□ -0.68
CHD3-202ENST00000358181 TRIM55Q9BYV6 548 aa10.77□□□□□ -0.68
CHD3-202ENST00000358181 SUGCTQ9HAC7 445 aa10.77□□□□□ -0.68
CHD3-202ENST00000358181 USH1CQ9Y6N9 552 aa10.77□□□□□ -0.68
CHD3-202ENST00000358181 TNRQ92752 1358 aa10.77□□□□□ -0.68
CHD3-202ENST00000358181 PFDN6O15212 129 aa10.77□□□□□ -0.68
CHD3-202ENST00000358181 LRGUKQ96M69 825 aa10.77□□□□□ -0.68
CHD3-202ENST00000358181 P4HA1P13674 534 aa10.77□□□□□ -0.69
CHD3-202ENST00000358181 TRIM14Q14142 442 aa10.77□□□□□ -0.69
CHD3-202ENST00000358181 CCDC93Q567U6 631 aa10.77□□□□□ -0.69
CHD3-202ENST00000358181 TPTE2Q6XPS3 522 aa10.77□□□□□ -0.69
CHD3-202ENST00000358181 GRIN2AQ12879 1464 aa10.77□□□□□ -0.69
CHD3-202ENST00000358181 DENND4BO75064 1496 aaPredicted RBP10.77□□□□□ -0.69
CHD3-202ENST00000358181 TSC22D1Q15714 1073 aa10.77□□□□□ -0.69
CHD3-202ENST00000358181 ZC3H12BQ5HYM0 836 aaKnown RBP10.77□□□□□ -0.69
CHD3-202ENST00000358181 BEND3Q5T5X7 828 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms