RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 MCAMP43121 646 aa19.47■□□□□ 0.71
IFT20-202ENST00000357896 USP14P54578 494 aa19.47■□□□□ 0.71
IFT20-202ENST00000357896 MEIS3Q99687 375 aa19.47■□□□□ 0.71
IFT20-202ENST00000357896 FEZ1Q99689 392 aa19.47■□□□□ 0.71
IFT20-202ENST00000357896 NOB1Q9ULX3 412 aaKnown RBP19.47■□□□□ 0.71
IFT20-202ENST00000357896 NDUFB9Q9Y6M9 179 aa19.47■□□□□ 0.71
IFT20-202ENST00000357896 MAST2Q6P0Q8 1798 aa19.47■□□□□ 0.71
IFT20-202ENST00000357896 KBTBD13C9JR72 458 aa19.46■□□□□ 0.71
IFT20-202ENST00000357896 IGSF3O75054 1194 aa19.46■□□□□ 0.71
IFT20-202ENST00000357896 CNMDO75829 334 aa19.46■□□□□ 0.71
IFT20-202ENST00000357896 GNAI3P08754 354 aa19.46■□□□□ 0.71
IFT20-202ENST00000357896 MTX1Q13505 466 aa19.46■□□□□ 0.71
IFT20-202ENST00000357896 GRB14Q14449 540 aa19.46■□□□□ 0.71
IFT20-202ENST00000357896 SHROOM1Q2M3G4 852 aaPredicted RBP19.46■□□□□ 0.71
IFT20-202ENST00000357896 LBX2Q6XYB7 198 aa19.46■□□□□ 0.71
IFT20-202ENST00000357896 SLC39A5Q6ZMH5 540 aa19.46■□□□□ 0.71
IFT20-202ENST00000357896 CATSPERGQ6ZRH7 1159 aa19.46■□□□□ 0.71
IFT20-202ENST00000357896 PRDM5Q9NQX1 630 aaPredicted RBP19.46■□□□□ 0.71
IFT20-202ENST00000357896 GH2P01242 217 aa19.45■□□□□ 0.7
IFT20-202ENST00000357896 FOSL2P15408 326 aa19.45■□□□□ 0.7
IFT20-202ENST00000357896 CYP2C19P33261 490 aa19.45■□□□□ 0.7
IFT20-202ENST00000357896 SLFN5Q08AF3 891 aa19.45■□□□□ 0.7
IFT20-202ENST00000357896 C9orf50Q5SZB4 431 aa19.45■□□□□ 0.7
IFT20-202ENST00000357896 GJC2Q5T442 439 aaPredicted RBP19.45■□□□□ 0.7
IFT20-202ENST00000357896 MYLIPQ8WY64 445 aa19.45■□□□□ 0.7
IFT20-202ENST00000357896 DPP9Q86TI2 863 aa19.44■□□□□ 0.7
IFT20-202ENST00000357896 BADQ92934 168 aa19.44■□□□□ 0.7
IFT20-202ENST00000357896 TTYH1Q9H313 450 aaPredicted RBP19.44■□□□□ 0.7
IFT20-202ENST00000357896 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.44■□□□□ 0.7
IFT20-202ENST00000357896 FRMPD3Q5JV73 1810 aa19.44■□□□□ 0.7
IFT20-202ENST00000357896 TMEM265A0A087WTH1 108 aa19.43■□□□□ 0.7
IFT20-202ENST00000357896 STRNO43815 780 aa19.43■□□□□ 0.7
IFT20-202ENST00000357896 CT47B1P0C2W7 299 aaPredicted RBP19.43■□□□□ 0.7
IFT20-202ENST00000357896 CYBAP13498 195 aa19.43■□□□□ 0.7
IFT20-202ENST00000357896 G3BP1Q13283 466 aaKnown RBP eCLIP19.43■□□□□ 0.7
IFT20-202ENST00000357896 SNX17Q15036 470 aa19.43■□□□□ 0.7
IFT20-202ENST00000357896 ZYXQ15942 572 aaKnown RBP19.43■□□□□ 0.7
IFT20-202ENST00000357896 OLFML2BQ68BL8 750 aa19.43■□□□□ 0.7
IFT20-202ENST00000357896 TRPV1Q8NER1 839 aa19.43■□□□□ 0.7
IFT20-202ENST00000357896 NPLOC4Q8TAT6 608 aa19.43■□□□□ 0.7
IFT20-202ENST00000357896 KIAA1683Q9H0B3 1180 aa19.43■□□□□ 0.7
IFT20-202ENST00000357896 SAP30BPQ9UHR5 308 aaKnown RBP19.43■□□□□ 0.7
IFT20-202ENST00000357896 CDH23Q9H251 3354 aa19.43■□□□□ 0.7
IFT20-202ENST00000357896 SIPA1L1O43166 1804 aa19.43■□□□□ 0.7
IFT20-202ENST00000357896 IGHA2P01877 340 aa19.42■□□□□ 0.7
IFT20-202ENST00000357896 VCAM1P19320 739 aa19.42■□□□□ 0.7
IFT20-202ENST00000357896 C1orf53Q5VUE5 145 aa19.42■□□□□ 0.7
IFT20-202ENST00000357896 TATDN1Q6P1N9 297 aa19.42■□□□□ 0.7
IFT20-202ENST00000357896 BTBD7Q9P203 1132 aa19.42■□□□□ 0.7
IFT20-202ENST00000357896 SEPT4O43236 478 aa19.41■□□□□ 0.7
IFT20-202ENST00000357896 RAB3GAP1Q15042 981 aa19.41■□□□□ 0.7
IFT20-202ENST00000357896 TRIM60Q495X7 471 aa19.41■□□□□ 0.7
IFT20-202ENST00000357896 CCDC158Q5M9N0 1113 aa19.41■□□□□ 0.7
IFT20-202ENST00000357896 TTC39AQ5SRH9 613 aa19.41■□□□□ 0.7
IFT20-202ENST00000357896 ADGRA1Q86SQ6 560 aa19.41■□□□□ 0.7
IFT20-202ENST00000357896 CERS3Q8IU89 383 aa19.41■□□□□ 0.7
IFT20-202ENST00000357896 SNRKQ9NRH2 765 aa19.41■□□□□ 0.7
IFT20-202ENST00000357896 SLC5A4Q9NY91 659 aa19.41■□□□□ 0.7
IFT20-202ENST00000357896 LTBP2Q14767 1821 aa19.41■□□□□ 0.7
IFT20-202ENST00000357896 PDLIM7Q9NR12 457 aa19.4■□□□□ 0.7
IFT20-202ENST00000357896 SERPINB13Q9UIV8 391 aa19.4■□□□□ 0.7
IFT20-202ENST00000357896 TTC28Q96AY4 2481 aa19.39■□□□□ 0.69
IFT20-202ENST00000357896 SPDYE16A6NNV3 312 aaPredicted RBP19.39■□□□□ 0.69
IFT20-202ENST00000357896 MYCNP04198 464 aaPredicted RBP19.39■□□□□ 0.69
IFT20-202ENST00000357896 ABCB5Q2M3G0 1257 aa19.39■□□□□ 0.69
IFT20-202ENST00000357896 CERKLQ49MI3 558 aaPredicted RBP19.39■□□□□ 0.69
IFT20-202ENST00000357896 TJAP1Q5JTD0 557 aa19.39■□□□□ 0.69
IFT20-202ENST00000357896 EHD4Q9H223 541 aa19.39■□□□□ 0.69
IFT20-202ENST00000357896 RPAP3Q9H6T3 665 aaPredicted RBP19.39■□□□□ 0.69
IFT20-202ENST00000357896 CABP5Q9NP86 173 aa19.39■□□□□ 0.69
IFT20-202ENST00000357896 HOXC10Q9NYD6 342 aa19.39■□□□□ 0.69
IFT20-202ENST00000357896 TACC3Q9Y6A5 838 aa19.39■□□□□ 0.69
IFT20-202ENST00000357896 TRIM43BA6NCK2 446 aa19.38■□□□□ 0.69
IFT20-202ENST00000357896 CYP2E1P05181 493 aaPredicted RBP19.38■□□□□ 0.69
IFT20-202ENST00000357896 ADORA2AP29274 412 aa19.38■□□□□ 0.69
IFT20-202ENST00000357896 ADCYAP1R1P41586 468 aa19.38■□□□□ 0.69
IFT20-202ENST00000357896 TTC6Q86TZ1 520 aa19.38■□□□□ 0.69
IFT20-202ENST00000357896 ARHGAP45Q92619 1136 aa19.38■□□□□ 0.69
IFT20-202ENST00000357896 TRIM43Q96BQ3 446 aaPredicted RBP19.38■□□□□ 0.69
IFT20-202ENST00000357896 RNPC3Q96LT9 517 aaKnown RBP19.38■□□□□ 0.69
IFT20-202ENST00000357896 GPR108Q9NPR9 543 aa19.38■□□□□ 0.69
IFT20-202ENST00000357896 MUC3AQ02505 3323 aa19.38■□□□□ 0.69
IFT20-202ENST00000357896 USP5P45974 858 aa19.37■□□□□ 0.69
IFT20-202ENST00000357896 COG2Q14746 738 aa19.37■□□□□ 0.69
IFT20-202ENST00000357896 ANO1Q5XXA6 986 aa19.37■□□□□ 0.69
IFT20-202ENST00000357896 SH3RF1Q7Z6J0 888 aa19.37■□□□□ 0.69
IFT20-202ENST00000357896 ACER1Q8TDN7 264 aa19.37■□□□□ 0.69
IFT20-202ENST00000357896 ZNF512BQ96KM6 892 aaPredicted RBP19.37■□□□□ 0.69
IFT20-202ENST00000357896 MOV10L1Q9BXT6 1211 aaKnown RBP19.37■□□□□ 0.69
IFT20-202ENST00000357896 RLFQ13129 1914 aa19.37■□□□□ 0.69
IFT20-202ENST00000357896 TNFRSF10AO00220 468 aa19.36■□□□□ 0.69
IFT20-202ENST00000357896 GNAI2P04899 355 aa19.36■□□□□ 0.69
IFT20-202ENST00000357896 DYNLL1P63167 89 aaKnown RBP19.36■□□□□ 0.69
IFT20-202ENST00000357896 TLE2Q04725 743 aa19.36■□□□□ 0.69
IFT20-202ENST00000357896 LRRC41Q15345 812 aa19.36■□□□□ 0.69
IFT20-202ENST00000357896 SHCBP1Q8NEM2 672 aa19.36■□□□□ 0.69
IFT20-202ENST00000357896 FERMT2Q96AC1 680 aa19.36■□□□□ 0.69
IFT20-202ENST00000357896 SPATC1LQ9H0A9 340 aa19.36■□□□□ 0.69
IFT20-202ENST00000357896 FOCADQ5VW36 1801 aa19.35■□□□□ 0.69
IFT20-202ENST00000357896 CLTBP09497 229 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms