RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 CNGA4Q8IV77 575 aa12.09□□□□□ -0.47
CAPN3-205ENST00000357568 FOXP4Q8IVH2 680 aaPredicted RBP12.09□□□□□ -0.47
CAPN3-205ENST00000357568 CTAGE4Q8IX94 777 aa12.09□□□□□ -0.47
CAPN3-205ENST00000357568 FAM177A1Q8N128 213 aaPredicted RBP12.09□□□□□ -0.47
CAPN3-205ENST00000357568 PNKPQ96T60 521 aa12.09□□□□□ -0.47
CAPN3-205ENST00000357568 FAN1Q9Y2M0 1017 aa12.09□□□□□ -0.47
CAPN3-205ENST00000357568 JRKLQ9Y4A0 524 aa12.09□□□□□ -0.47
CAPN3-205ENST00000357568 LONRF3Q496Y0 759 aa12.09□□□□□ -0.47
CAPN3-205ENST00000357568 TTC39AQ5SRH9 613 aa12.09□□□□□ -0.47
CAPN3-205ENST00000357568 TRAPPC3LQ5T215 181 aa12.09□□□□□ -0.47
CAPN3-205ENST00000357568 ANKRD13DQ6ZTN6 518 aa12.09□□□□□ -0.47
CAPN3-205ENST00000357568 XAGE3Q8WTP9 111 aa12.09□□□□□ -0.47
CAPN3-205ENST00000357568 RPGRIP1Q96KN7 1286 aa12.09□□□□□ -0.47
CAPN3-205ENST00000357568 NAPGQ99747 312 aaPredicted RBP12.09□□□□□ -0.47
CAPN3-205ENST00000357568 ALG1Q9BT22 464 aa12.09□□□□□ -0.47
CAPN3-205ENST00000357568 TFCP2L1Q9NZI6 479 aa12.09□□□□□ -0.47
CAPN3-205ENST00000357568 ECM29Q5VYK3 1845 aa12.08□□□□□ -0.47
CAPN3-205ENST00000357568 A0A087WUV0 522 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-205ENST00000357568 TARSL2A2RTX5 802 aaKnown RBP12.08□□□□□ -0.48
CAPN3-205ENST00000357568 MARCKSP29966 332 aaPredicted RBP12.08□□□□□ -0.48
CAPN3-205ENST00000357568 MCM6Q14566 821 aa12.08□□□□□ -0.48
CAPN3-205ENST00000357568 KRT40Q6A162 431 aa12.08□□□□□ -0.48
CAPN3-205ENST00000357568 LRRC31Q6UY01 552 aa12.08□□□□□ -0.48
CAPN3-205ENST00000357568 RALYLQ86SE5 291 aaKnown RBP12.08□□□□□ -0.48
CAPN3-205ENST00000357568 PPFIBP1Q86W92 1011 aa12.08□□□□□ -0.48
CAPN3-205ENST00000357568 TMTC1Q8IUR5 882 aa12.08□□□□□ -0.48
CAPN3-205ENST00000357568 FBXO3Q9UK99 471 aa12.08□□□□□ -0.48
CAPN3-205ENST00000357568 AKAP2Q9Y2D5 859 aa12.08□□□□□ -0.48
CAPN3-205ENST00000357568 ATP2B1P20020 1258 aa12.08□□□□□ -0.48
CAPN3-205ENST00000357568 ADKP55263 362 aaKnown RBP12.08□□□□□ -0.48
CAPN3-205ENST00000357568 ANTXR2P58335 489 aa12.08□□□□□ -0.48
CAPN3-205ENST00000357568 GOLGA8FQ08AF8 430 aa12.08□□□□□ -0.48
CAPN3-205ENST00000357568 GOLGA8DPQ0D2H9 430 aa12.08□□□□□ -0.48
CAPN3-205ENST00000357568 TRIM14Q14142 442 aa12.08□□□□□ -0.48
CAPN3-205ENST00000357568 KARSQ15046 597 aaKnown RBP12.08□□□□□ -0.48
CAPN3-205ENST00000357568 ATG9AQ7Z3C6 839 aa12.08□□□□□ -0.48
CAPN3-205ENST00000357568 RUBCNQ92622 972 aa12.08□□□□□ -0.48
CAPN3-205ENST00000357568 COL24A1Q17RW2 1714 aa12.08□□□□□ -0.48
CAPN3-205ENST00000357568 M0R2C6 588 aa12.07□□□□□ -0.48
CAPN3-205ENST00000357568 SHOX2O60902 331 aaPredicted RBP12.07□□□□□ -0.48
CAPN3-205ENST00000357568 MFAP3LO75121 409 aa12.07□□□□□ -0.48
CAPN3-205ENST00000357568 CHGBP05060 677 aa12.07□□□□□ -0.48
CAPN3-205ENST00000357568 IFIT1P09914 478 aaKnown RBP12.07□□□□□ -0.48
CAPN3-205ENST00000357568 MMP14P50281 582 aa12.07□□□□□ -0.48
CAPN3-205ENST00000357568 GYS2P54840 703 aa12.07□□□□□ -0.48
CAPN3-205ENST00000357568 AIMP1Q12904 312 aaKnown RBP12.07□□□□□ -0.48
CAPN3-205ENST00000357568 SPATA1Q5VX52 437 aa12.07□□□□□ -0.48
CAPN3-205ENST00000357568 APTXQ7Z2E3 356 aaKnown RBP12.07□□□□□ -0.48
CAPN3-205ENST00000357568 WASF1Q92558 559 aa12.07□□□□□ -0.48
CAPN3-205ENST00000357568 NCAPGQ9BPX3 1015 aa12.07□□□□□ -0.48
CAPN3-205ENST00000357568 PNPLA7Q6ZV29 1317 aa12.07□□□□□ -0.48
CAPN3-205ENST00000357568 ERVV-1B6SEH8 477 aa12.07□□□□□ -0.48
CAPN3-205ENST00000357568 PTPREP23469 700 aa12.07□□□□□ -0.48
CAPN3-205ENST00000357568 TRIM29Q14134 588 aa12.07□□□□□ -0.48
CAPN3-205ENST00000357568 KIF4BQ2VIQ3 1234 aa12.07□□□□□ -0.48
CAPN3-205ENST00000357568 DNAJC21Q5F1R6 531 aaKnown RBP12.07□□□□□ -0.48
CAPN3-205ENST00000357568 RAD9BQ6WBX8 426 aa12.07□□□□□ -0.48
CAPN3-205ENST00000357568 COPS6Q7L5N1 327 aa12.07□□□□□ -0.48
CAPN3-205ENST00000357568 NARFQ9UHQ1 456 aa12.07□□□□□ -0.48
CAPN3-205ENST00000357568 ANGEL1Q9UNK9 670 aaKnown RBP12.07□□□□□ -0.48
CAPN3-205ENST00000357568 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.06□□□□□ -0.48
CAPN3-205ENST00000357568 FOXP2O15409 715 aa12.06□□□□□ -0.48
CAPN3-205ENST00000357568 CDC27P30260 824 aa12.06□□□□□ -0.48
CAPN3-205ENST00000357568 VSNL1P62760 191 aa12.06□□□□□ -0.48
CAPN3-205ENST00000357568 AMPD2Q01433 879 aa12.06□□□□□ -0.48
CAPN3-205ENST00000357568 FMR1Q06787 632 aaKnown RBP eCLIP12.06□□□□□ -0.48
CAPN3-205ENST00000357568 FILIP1LQ4L180 1135 aa12.06□□□□□ -0.48
CAPN3-205ENST00000357568 CDKAL1Q5VV42 579 aa12.06□□□□□ -0.48
CAPN3-205ENST00000357568 ISM2Q6H9L7 571 aa12.06□□□□□ -0.48
CAPN3-205ENST00000357568 ZNF662Q6ZS27 426 aa12.06□□□□□ -0.48
CAPN3-205ENST00000357568 PACS2Q86VP3 889 aa12.06□□□□□ -0.48
CAPN3-205ENST00000357568 CNPY4Q8N129 248 aa12.06□□□□□ -0.48
CAPN3-205ENST00000357568 AFAP1L1Q8TED9 768 aa12.06□□□□□ -0.48
CAPN3-205ENST00000357568 SLC16A10Q8TF71 515 aa12.06□□□□□ -0.48
CAPN3-205ENST00000357568 TMEM87BQ96K49 555 aa12.06□□□□□ -0.48
CAPN3-205ENST00000357568 CEP89Q96ST8 783 aa12.06□□□□□ -0.48
CAPN3-205ENST00000357568 WWC3Q9ULE0 1092 aa12.06□□□□□ -0.48
CAPN3-205ENST00000357568 ATXN2Q99700 1313 aaKnown RBP12.06□□□□□ -0.48
CAPN3-205ENST00000357568 EP400Q96L91 3159 aa12.06□□□□□ -0.48
CAPN3-205ENST00000357568 A6NNZ2 444 aa12.06□□□□□ -0.48
CAPN3-205ENST00000357568 H7C1W4 665 aa12.06□□□□□ -0.48
CAPN3-205ENST00000357568 MYL6BP14649 208 aa12.06□□□□□ -0.48
CAPN3-205ENST00000357568 TUBB8Q3ZCM7 444 aa12.06□□□□□ -0.48
CAPN3-205ENST00000357568 KIF6Q6ZMV9 814 aa12.06□□□□□ -0.48
CAPN3-205ENST00000357568 MMS22LQ6ZRQ5 1243 aa12.06□□□□□ -0.48
CAPN3-205ENST00000357568 APPBP2Q92624 585 aa12.06□□□□□ -0.48
CAPN3-205ENST00000357568 ARHGEF1Q92888 912 aaKnown RBP12.06□□□□□ -0.48
CAPN3-205ENST00000357568 ZBTB9Q96C00 473 aa12.06□□□□□ -0.48
CAPN3-205ENST00000357568 MYCBPQ99417 103 aaPredicted RBP12.06□□□□□ -0.48
CAPN3-205ENST00000357568 DESI2Q9BSY9 194 aa12.06□□□□□ -0.48
CAPN3-205ENST00000357568 DEF6Q9H4E7 631 aa12.06□□□□□ -0.48
CAPN3-205ENST00000357568 ADD3Q9UEY8 706 aaKnown RBP12.06□□□□□ -0.48
CAPN3-205ENST00000357568 TBC1D2BQ9UPU7 963 aa12.06□□□□□ -0.48
CAPN3-205ENST00000357568 NDUFB9Q9Y6M9 179 aa12.06□□□□□ -0.48
CAPN3-205ENST00000357568 ANKRD36CQ5JPF3 1778 aa12.06□□□□□ -0.48
CAPN3-205ENST00000357568 SOWAHDA6NJG2 315 aa12.05□□□□□ -0.48
CAPN3-205ENST00000357568 PRPF6O94906 941 aaKnown RBP12.05□□□□□ -0.48
CAPN3-205ENST00000357568 FOXO4P98177 505 aa12.05□□□□□ -0.48
CAPN3-205ENST00000357568 TRDNQ13061 729 aa12.05□□□□□ -0.48
CAPN3-205ENST00000357568 ZNF569Q5MCW4 686 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms