RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 USP17L12C9JPN9 530 aa17.41■□□□□ 0.38
PTBP1-203ENST00000356948 USP17L21D6R901 530 aa17.41■□□□□ 0.38
PTBP1-203ENST00000356948 MARCH10Q8NA82 808 aaPredicted RBP17.41■□□□□ 0.38
PTBP1-203ENST00000356948 RIOK1Q9BRS2 568 aaKnown RBP17.41■□□□□ 0.38
PTBP1-203ENST00000356948 NACAP1Q9BZK3 213 aa17.41■□□□□ 0.38
PTBP1-203ENST00000356948 PSDA5PKW4 1024 aaPredicted RBP17.41■□□□□ 0.38
PTBP1-203ENST00000356948 DEXIO95424 95 aa17.41■□□□□ 0.38
PTBP1-203ENST00000356948 SARSP49591 514 aaKnown RBP17.41■□□□□ 0.38
PTBP1-203ENST00000356948 MORC3Q14149 939 aa17.41■□□□□ 0.38
PTBP1-203ENST00000356948 TXNRD3Q86VQ6 643 aa17.41■□□□□ 0.38
PTBP1-203ENST00000356948 RASGRP4Q8TDF6 673 aa17.41■□□□□ 0.38
PTBP1-203ENST00000356948 AATFQ9NY61 560 aaKnown RBP eCLIP17.41■□□□□ 0.385e-7■■■■□ 20.4
PTBP1-203ENST00000356948 RNF225M0QZC1 329 aaPredicted RBP17.41■□□□□ 0.38
PTBP1-203ENST00000356948 ZNF18P17022 549 aa17.41■□□□□ 0.38
PTBP1-203ENST00000356948 LZTFL1Q9NQ48 299 aa17.41■□□□□ 0.38
PTBP1-203ENST00000356948 PARP3Q9Y6F1 533 aa17.41■□□□□ 0.38
PTBP1-203ENST00000356948 MYH14Q7Z406 1995 aaKnown RBP17.41■□□□□ 0.38
PTBP1-203ENST00000356948 FUT2Q10981 343 aa17.4■□□□□ 0.38
PTBP1-203ENST00000356948 NPY5RQ15761 445 aa17.4■□□□□ 0.38
PTBP1-203ENST00000356948 BAG1Q99933 345 aaPredicted RBP17.4■□□□□ 0.38
PTBP1-203ENST00000356948 CNNM2Q9H8M5 875 aa17.4■□□□□ 0.38
PTBP1-203ENST00000356948 SYCP1Q15431 976 aa17.4■□□□□ 0.38
PTBP1-203ENST00000356948 IL17AQ16552 155 aa17.4■□□□□ 0.38
PTBP1-203ENST00000356948 CCDC152Q4G0S7 254 aa17.4■□□□□ 0.38
PTBP1-203ENST00000356948 MORC2Q9Y6X9 1032 aaPredicted RBP17.4■□□□□ 0.38
PTBP1-203ENST00000356948 GNG11P61952 73 aa17.4■□□□□ 0.38
PTBP1-203ENST00000356948 FAM182BQ5T319 152 aa17.4■□□□□ 0.38
PTBP1-203ENST00000356948 PLIN2Q99541 437 aa17.4■□□□□ 0.38
PTBP1-203ENST00000356948 FEZ1Q99689 392 aa17.4■□□□□ 0.38
PTBP1-203ENST00000356948 KCND1Q9NSA2 647 aa17.4■□□□□ 0.38
PTBP1-203ENST00000356948 SRPRBQ9Y5M8 271 aaKnown RBP17.4■□□□□ 0.38
PTBP1-203ENST00000356948 PRDX5P30044 214 aa17.39■□□□□ 0.37
PTBP1-203ENST00000356948 CCT6AP40227 531 aaKnown RBP17.39■□□□□ 0.37
PTBP1-203ENST00000356948 SRBD1Q8N5C6 995 aaKnown RBP17.39■□□□□ 0.37
PTBP1-203ENST00000356948 FOXP1Q9H334 677 aaPredicted RBP17.39■□□□□ 0.37
PTBP1-203ENST00000356948 CHD4Q14839 1912 aa17.39■□□□□ 0.37
PTBP1-203ENST00000356948 TBX2Q13207 712 aaPredicted RBP17.39■□□□□ 0.37
PTBP1-203ENST00000356948 SART3Q15020 963 aaKnown RBP17.39■□□□□ 0.37
PTBP1-203ENST00000356948 RILPL1Q5EBL4 403 aa17.39■□□□□ 0.37
PTBP1-203ENST00000356948 KRT222Q8N1A0 295 aa17.39■□□□□ 0.37
PTBP1-203ENST00000356948 ZSCAN10Q96SZ4 725 aaPredicted RBP17.39■□□□□ 0.37
PTBP1-203ENST00000356948 MTRQ99707 1265 aa17.39■□□□□ 0.37
PTBP1-203ENST00000356948 STK36Q9NRP7 1315 aa17.39■□□□□ 0.37
PTBP1-203ENST00000356948 SLFN14P0C7P3 912 aa17.39■□□□□ 0.37
PTBP1-203ENST00000356948 IRX5P78411 483 aaPredicted RBP17.39■□□□□ 0.37
PTBP1-203ENST00000356948 CTR9Q6PD62 1173 aa17.39■□□□□ 0.37
PTBP1-203ENST00000356948 APTXQ7Z2E3 356 aaKnown RBP17.39■□□□□ 0.37
PTBP1-203ENST00000356948 CPVLQ9H3G5 476 aa17.39■□□□□ 0.37
PTBP1-203ENST00000356948 NUTM2BA6NNL0 878 aaPredicted RBP17.38■□□□□ 0.37
PTBP1-203ENST00000356948 NUTM2EB1AL46 878 aaPredicted RBP17.38■□□□□ 0.37
PTBP1-203ENST00000356948 IFIT1BQ5T764 474 aaKnown RBP17.38■□□□□ 0.37
PTBP1-203ENST00000356948 NUTM2AQ8IVF1 878 aaPredicted RBP17.38■□□□□ 0.37
PTBP1-203ENST00000356948 PAGE5Q96GU1 130 aa17.38■□□□□ 0.37
PTBP1-203ENST00000356948 FAM84BQ96KN1 310 aaPredicted RBP17.38■□□□□ 0.37
PTBP1-203ENST00000356948 RBL2Q08999 1139 aa17.38■□□□□ 0.37
PTBP1-203ENST00000356948 AMIGO3Q86WK7 504 aa17.38■□□□□ 0.37
PTBP1-203ENST00000356948 GPR101Q96P66 508 aaPredicted RBP17.38■□□□□ 0.37
PTBP1-203ENST00000356948 TFR2Q9UP52 801 aa17.38■□□□□ 0.37
PTBP1-203ENST00000356948 PNPLA7Q6ZV29 1317 aa17.38■□□□□ 0.37
PTBP1-203ENST00000356948 DISP2A7MBM2 1401 aa17.38■□□□□ 0.37
PTBP1-203ENST00000356948 CICQ96RK0 1608 aaPredicted RBP17.38■□□□□ 0.37
PTBP1-203ENST00000356948 TROAPQ12815 778 aa17.38■□□□□ 0.37
PTBP1-203ENST00000356948 RAD9BQ6WBX8 426 aa17.38■□□□□ 0.37
PTBP1-203ENST00000356948 PIK3AP1Q6ZUJ8 805 aa17.38■□□□□ 0.37
PTBP1-203ENST00000356948 GPKOWQ92917 476 aaPredicted RBP eCLIP17.38■□□□□ 0.37
PTBP1-203ENST00000356948 ZCCHC17Q9NP64 241 aaKnown RBP17.38■□□□□ 0.37
PTBP1-203ENST00000356948 FHOD1Q9Y613 1164 aa17.38■□□□□ 0.37
PTBP1-203ENST00000356948 MCM7P33993 719 aa17.37■□□□□ 0.37
PTBP1-203ENST00000356948 PTGDRQ13258 359 aa17.37■□□□□ 0.37
PTBP1-203ENST00000356948 SPECC1LQ69YQ0 1117 aa17.37■□□□□ 0.37
PTBP1-203ENST00000356948 PP2D1A8MPX8 630 aa17.37■□□□□ 0.37
PTBP1-203ENST00000356948 H2AFXP16104 143 aaPredicted RBP17.37■□□□□ 0.37
PTBP1-203ENST00000356948 MINPP1Q9UNW1 487 aa17.37■□□□□ 0.37
PTBP1-203ENST00000356948 IPO4Q8TEX9 1081 aaKnown RBP17.37■□□□□ 0.37
PTBP1-203ENST00000356948 ESR2Q92731 530 aa17.37■□□□□ 0.37
PTBP1-203ENST00000356948 PHF20Q9BVI0 1012 aa17.37■□□□□ 0.37
PTBP1-203ENST00000356948 SRP68Q9UHB9 627 aaKnown RBP17.37■□□□□ 0.37
PTBP1-203ENST00000356948 ANKRD36CQ5JPF3 1778 aa17.36■□□□□ 0.37
PTBP1-203ENST00000356948 TRIM75PA6NK02 468 aa17.36■□□□□ 0.37
PTBP1-203ENST00000356948 NR1I3Q14994 352 aa17.36■□□□□ 0.37
PTBP1-203ENST00000356948 DDB1Q16531 1140 aa17.36■□□□□ 0.37
PTBP1-203ENST00000356948 NHSL1Q5SYE7 1610 aa17.35■□□□□ 0.37
PTBP1-203ENST00000356948 AKAP17AQ02040 695 aaKnown RBP17.35■□□□□ 0.37
PTBP1-203ENST00000356948 CUL4BQ13620 913 aa17.35■□□□□ 0.37
PTBP1-203ENST00000356948 NT5DC1Q5TFE4 455 aa17.35■□□□□ 0.37
PTBP1-203ENST00000356948 DYNLL2Q96FJ2 89 aa17.35■□□□□ 0.37
PTBP1-203ENST00000356948 CBFA2T2O43439 604 aa17.35■□□□□ 0.37
PTBP1-203ENST00000356948 GRIK5Q16478 980 aa17.35■□□□□ 0.37
PTBP1-203ENST00000356948 GPIHBP1Q8IV16 184 aa17.35■□□□□ 0.37
PTBP1-203ENST00000356948 WASF1Q92558 559 aa17.35■□□□□ 0.37
PTBP1-203ENST00000356948 XDHP47989 1333 aa17.35■□□□□ 0.37
PTBP1-203ENST00000356948 MYH13Q9UKX3 1938 aa17.35■□□□□ 0.37
PTBP1-203ENST00000356948 SASH3O75995 380 aa17.35■□□□□ 0.37
PTBP1-203ENST00000356948 USP17L8P0C7I0 530 aa17.35■□□□□ 0.37
PTBP1-203ENST00000356948 FXR1P51114 621 aaKnown RBP eCLIP17.35■□□□□ 0.37
PTBP1-203ENST00000356948 MECOMQ03112 1051 aa17.35■□□□□ 0.37
PTBP1-203ENST00000356948 STAG2Q8N3U4 1231 aa17.35■□□□□ 0.37
PTBP1-203ENST00000356948 ENOX1Q8TC92 643 aaKnown RBP17.35■□□□□ 0.37
PTBP1-203ENST00000356948 CTNND2Q9UQB3 1225 aa17.35■□□□□ 0.37
PTBP1-203ENST00000356948 BCL9LQ86UU0 1499 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms