RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 NUF2Q9BZD4 464 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 FAM8A1Q9UBU6 413 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 ZHX1Q9UKY1 873 aaPredicted RBP6.14□□□□□ -1.43
PTPRD-202ENST00000356435 TARBP1Q13395 1621 aaKnown RBP6.14□□□□□ -1.43
PTPRD-202ENST00000356435 AOX1Q06278 1338 aa6.14□□□□□ -1.43
PTPRD-202ENST00000356435 GIGYF1O75420 1035 aaPredicted RBP6.13□□□□□ -1.43
PTPRD-202ENST00000356435 TUBBP07437 444 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 USH1GQ495M9 461 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 METTL13Q8N6R0 699 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 IWS1Q96ST2 819 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 CLSTN2Q9H4D0 955 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 DNM3Q9UQ16 869 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 EXOC3O60645 756 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 CCDC122Q5T0U0 273 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 FAM160B1Q5W0V3 765 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 CREB3L3Q68CJ9 461 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 GIMAP6Q6P9H5 292 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 MYCT1Q8N699 235 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 MEIS3Q99687 375 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 BCS1LQ9Y276 419 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 ABCC4O15439 1325 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 RUFY3Q7L099 469 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 SULF1Q8IWU6 871 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 MRPL50Q8N5N7 158 aaKnown RBP6.13□□□□□ -1.43
PTPRD-202ENST00000356435 IQCDQ96DY2 449 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 TNNC2P02585 160 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 MNAT1P51948 309 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 STX17P56962 302 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 PPP2R5BQ15173 497 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 MTHFSDQ2M296 383 aaKnown RBP6.13□□□□□ -1.43
PTPRD-202ENST00000356435 CCDC62Q6P9F0 684 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 GADL1Q6ZQY3 521 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 MCF2L2Q86YR7 1114 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 DNAJC25Q9H1X3 360 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 BICC1Q9H694 974 aaKnown RBP6.13□□□□□ -1.43
PTPRD-202ENST00000356435 ARMT1Q9H993 441 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 TTLL3Q9Y4R7 772 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 EYA2O00167 538 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 HCLS1P14317 486 aaPredicted RBP6.13□□□□□ -1.43
PTPRD-202ENST00000356435 MCTP2Q6DN12 878 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 CHST3Q7LGC8 479 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 MAIP1Q8WWC4 291 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 ARPP21Q9UBL0 812 aaPredicted RBP6.13□□□□□ -1.43
PTPRD-202ENST00000356435 LRFN2Q9ULH4 789 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 PA2G4Q9UQ80 394 aaKnown RBP6.13□□□□□ -1.43
PTPRD-202ENST00000356435 ATP8B3O60423 1300 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 PPP2R5DQ14738 602 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 ADPGKQ9BRR6 497 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 IQGAP3Q86VI3 1631 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 CUL4AQ13619 759 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 TFDP1Q14186 410 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 NEDD9Q14511 834 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 KRT81Q14533 505 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 CALCRLQ16602 461 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 GKAP1Q5VSY0 366 aaPredicted RBP6.13□□□□□ -1.43
PTPRD-202ENST00000356435 CPXCR1Q8N123 301 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 FAM76AQ8TAV0 307 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 CHURC1Q8WUH1 139 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 TCEANC2Q96MN5 208 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 LRWD1Q9UFC0 647 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 RSPH14Q9UHP6 348 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 SPDYE16A6NNV3 312 aaPredicted RBP6.13□□□□□ -1.43
PTPRD-202ENST00000356435 SPDYE2Q495Y8 402 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 CYP26C1Q6V0L0 522 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 NBPF11Q86T75 865 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 NT5C3AQ9H0P0 336 aa6.13□□□□□ -1.43
PTPRD-202ENST00000356435 MRPL44Q9H9J2 332 aaKnown RBP6.13□□□□□ -1.43
PTPRD-202ENST00000356435 IPO11Q9UI26 975 aaKnown RBP6.13□□□□□ -1.43
PTPRD-202ENST00000356435 PTCH1Q13635 1447 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 AKR1B15C9JRZ8 316 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-202ENST00000356435 XPAP23025 273 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-202ENST00000356435 HOXC9P31274 260 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 FAM98CQ17RN3 349 aaKnown RBP6.12□□□□□ -1.43
PTPRD-202ENST00000356435 CWF19L2Q2TBE0 894 aaKnown RBP6.12□□□□□ -1.43
PTPRD-202ENST00000356435 CASC4Q6P4E1 433 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 SNX29Q8TEQ0 813 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 ATP2A3Q93084 1043 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 AATFQ9NY61 560 aaKnown RBP eCLIP6.12□□□□□ -1.43
PTPRD-202ENST00000356435 FAM135BQ49AJ0 1406 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 N4BP1O75113 896 aaKnown RBP6.12□□□□□ -1.43
PTPRD-202ENST00000356435 FLOT1O75955 427 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 SH2D4BQ5SQS7 431 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 TRIM56Q9BRZ2 755 aaKnown RBP6.12□□□□□ -1.43
PTPRD-202ENST00000356435 USH1CQ9Y6N9 552 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 MED14O60244 1454 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 SYCP2Q9BX26 1530 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 CTIFO43310 598 aaKnown RBP6.12□□□□□ -1.43
PTPRD-202ENST00000356435 CACNA2D3Q8IZS8 1091 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 HAUS1Q96CS2 278 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 HAUS8Q9BT25 410 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 OSBPL3Q9H4L5 887 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 TTC36A6NLP5 189 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 KIF3CO14782 793 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 ZBTB7BO15156 539 aaPredicted RBP6.12□□□□□ -1.43
PTPRD-202ENST00000356435 GAS7O60861 476 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 KRT3P12035 628 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 ZNF449Q6P9G9 518 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 IP6K1Q92551 441 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 DACT1Q9NYF0 836 aa6.12□□□□□ -1.43
PTPRD-202ENST00000356435 RNF17Q9BXT8 1623 aaKnown RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms