RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 CNKSR2Q8WXI2 1034 aa18.34■□□□□ 0.53
TRIM13-201ENST00000356017 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.34■□□□□ 0.53
TRIM13-201ENST00000356017 ZSWIM5Q9P217 1185 aa18.34■□□□□ 0.53
TRIM13-201ENST00000356017 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.34■□□□□ 0.53
TRIM13-201ENST00000356017 KCNH4Q9UQ05 1017 aa18.34■□□□□ 0.53
TRIM13-201ENST00000356017 TAF6LQ9Y6J9 622 aa18.34■□□□□ 0.53
TRIM13-201ENST00000356017 IGKV6D-41A0A0C4DH26 115 aa18.33■□□□□ 0.52
TRIM13-201ENST00000356017 USP17L10C9JJH3 530 aa18.33■□□□□ 0.52
TRIM13-201ENST00000356017 HMGB1P09429 215 aaKnown RBP18.33■□□□□ 0.52
TRIM13-201ENST00000356017 GTF2A2P52657 109 aa18.33■□□□□ 0.52
TRIM13-201ENST00000356017 SPP2Q13103 211 aa18.33■□□□□ 0.52
TRIM13-201ENST00000356017 GRM1Q13255 1194 aa18.33■□□□□ 0.52
TRIM13-201ENST00000356017 STOX1Q6ZVD7 989 aa18.33■□□□□ 0.52
TRIM13-201ENST00000356017 RASEFQ8IZ41 740 aa18.33■□□□□ 0.52
TRIM13-201ENST00000356017 SH2D4AQ9H788 454 aa18.33■□□□□ 0.52
TRIM13-201ENST00000356017 MTMR4Q9NYA4 1195 aa18.33■□□□□ 0.52
TRIM13-201ENST00000356017 NYAP2Q9P242 653 aa18.33■□□□□ 0.52
TRIM13-201ENST00000356017 WDR33Q9C0J8 1336 aaKnown RBP18.32■□□□□ 0.52
TRIM13-201ENST00000356017 MANSC4A6NHS7 340 aaPredicted RBP18.32■□□□□ 0.52
TRIM13-201ENST00000356017 TRIM75PA6NK02 468 aa18.32■□□□□ 0.52
TRIM13-201ENST00000356017 C19orf81C9J6K1 198 aa18.32■□□□□ 0.52
TRIM13-201ENST00000356017 TTLL1O95922 423 aa18.32■□□□□ 0.52
TRIM13-201ENST00000356017 GJA5P36382 358 aa18.32■□□□□ 0.52
TRIM13-201ENST00000356017 INHBEP58166 350 aa18.32■□□□□ 0.52
TRIM13-201ENST00000356017 CCDC84Q86UT8 332 aaPredicted RBP18.32■□□□□ 0.52
TRIM13-201ENST00000356017 REM2Q8IYK8 340 aaPredicted RBP18.32■□□□□ 0.52
TRIM13-201ENST00000356017 CEP95Q96GE4 821 aa18.32■□□□□ 0.52
TRIM13-201ENST00000356017 TTC14Q96N46 770 aa18.32■□□□□ 0.52
TRIM13-201ENST00000356017 NEK1Q96PY6 1258 aa18.32■□□□□ 0.52
TRIM13-201ENST00000356017 UBAC1Q9BSL1 405 aa18.32■□□□□ 0.52
TRIM13-201ENST00000356017 SNX14Q9Y5W7 946 aa18.32■□□□□ 0.52
TRIM13-201ENST00000356017 MYH8P13535 1937 aa18.32■□□□□ 0.52
TRIM13-201ENST00000356017 EEF2P13639 858 aaKnown RBP18.31■□□□□ 0.52
TRIM13-201ENST00000356017 PSMA5P28066 241 aa18.31■□□□□ 0.52
TRIM13-201ENST00000356017 MAP2K2P36507 400 aa18.31■□□□□ 0.52
TRIM13-201ENST00000356017 VEGFBP49765 207 aa18.31■□□□□ 0.52
TRIM13-201ENST00000356017 USP14P54578 494 aa18.31■□□□□ 0.52
TRIM13-201ENST00000356017 BACE1P56817 501 aa18.31■□□□□ 0.52
TRIM13-201ENST00000356017 ANAPC15P60006 121 aa18.31■□□□□ 0.52
TRIM13-201ENST00000356017 SART3Q15020 963 aaKnown RBP18.31■□□□□ 0.52
TRIM13-201ENST00000356017 FEZ1Q99689 392 aa18.31■□□□□ 0.52
TRIM13-201ENST00000356017 BACH2Q9BYV9 841 aa18.31■□□□□ 0.52
TRIM13-201ENST00000356017 IL17RBQ9NRM6 502 aa18.31■□□□□ 0.52
TRIM13-201ENST00000356017 SYNPO2Q9UMS6 1093 aa18.31■□□□□ 0.52
TRIM13-201ENST00000356017 CETPP11597 493 aa18.31■□□□□ 0.52
TRIM13-201ENST00000356017 MCM5P33992 734 aa18.31■□□□□ 0.52
TRIM13-201ENST00000356017 ATP2B2Q01814 1243 aa18.31■□□□□ 0.52
TRIM13-201ENST00000356017 MKRN3Q13064 507 aaKnown RBP18.31■□□□□ 0.52
TRIM13-201ENST00000356017 DGKHQ86XP1 1220 aa18.31■□□□□ 0.52
TRIM13-201ENST00000356017 ZSCAN10Q96SZ4 725 aaPredicted RBP18.31■□□□□ 0.52
TRIM13-201ENST00000356017 MTA3Q9BTC8 594 aa18.31■□□□□ 0.52
TRIM13-201ENST00000356017 KIAA1683Q9H0B3 1180 aa18.31■□□□□ 0.52
TRIM13-201ENST00000356017 CLIP2Q9UDT6 1046 aa18.31■□□□□ 0.52
TRIM13-201ENST00000356017 STX8Q9UNK0 236 aa18.31■□□□□ 0.52
TRIM13-201ENST00000356017 TMX2Q9Y320 296 aa18.31■□□□□ 0.52
TRIM13-201ENST00000356017 ATAD5Q96QE3 1844 aa18.3■□□□□ 0.52
TRIM13-201ENST00000356017 A0A0G2JLL6 359 aaPredicted RBP18.3■□□□□ 0.52
TRIM13-201ENST00000356017 ERICH2A1L162 156 aa18.3■□□□□ 0.52
TRIM13-201ENST00000356017 NOVP48745 357 aa18.3■□□□□ 0.52
TRIM13-201ENST00000356017 SREBF2Q12772 1141 aa18.3■□□□□ 0.52
TRIM13-201ENST00000356017 MTMR2Q13614 643 aa18.3■□□□□ 0.52
TRIM13-201ENST00000356017 FASTKD5Q7L8L6 764 aaKnown RBP18.3■□□□□ 0.52
TRIM13-201ENST00000356017 PRRT2Q7Z6L0 340 aaPredicted RBP18.3■□□□□ 0.52
TRIM13-201ENST00000356017 SIAH1Q8IUQ4 282 aa18.3■□□□□ 0.52
TRIM13-201ENST00000356017 MB21D2Q8IYB1 491 aaPredicted RBP18.3■□□□□ 0.52
TRIM13-201ENST00000356017 MKL1Q969V6 931 aa18.3■□□□□ 0.52
TRIM13-201ENST00000356017 MS4A4AQ96JQ5 239 aa18.3■□□□□ 0.52
TRIM13-201ENST00000356017 NMT2O60551 498 aa18.29■□□□□ 0.52
TRIM13-201ENST00000356017 ADCK5Q3MIX3 580 aa18.29■□□□□ 0.52
TRIM13-201ENST00000356017 SH3D19Q5HYK7 790 aa18.29■□□□□ 0.52
TRIM13-201ENST00000356017 CLEC10AQ8IUN9 316 aa18.29■□□□□ 0.52
TRIM13-201ENST00000356017 ACER1Q8TDN7 264 aa18.29■□□□□ 0.52
TRIM13-201ENST00000356017 TMOD4Q9NZQ9 345 aa18.29■□□□□ 0.52
TRIM13-201ENST00000356017 A0A1W2PRG0 241 aa18.28■□□□□ 0.52
TRIM13-201ENST00000356017 KIF23Q02241 960 aaPredicted RBP18.28■□□□□ 0.52
TRIM13-201ENST00000356017 USP17L2Q6R6M4 530 aa18.28■□□□□ 0.52
TRIM13-201ENST00000356017 CYB5R4Q7L1T6 521 aa18.28■□□□□ 0.52
TRIM13-201ENST00000356017 DHX32Q7L7V1 743 aaKnown RBP18.28■□□□□ 0.52
TRIM13-201ENST00000356017 PROCA1Q8NCQ7 364 aaPredicted RBP18.28■□□□□ 0.52
TRIM13-201ENST00000356017 NKX2-3Q8TAU0 364 aa18.28■□□□□ 0.52
TRIM13-201ENST00000356017 JAKMIP1Q96N16 626 aaKnown RBP18.28■□□□□ 0.52
TRIM13-201ENST00000356017 ZKSCAN3Q9BRR0 538 aa18.28■□□□□ 0.52
TRIM13-201ENST00000356017 TM6SF1Q9BZW5 370 aa18.28■□□□□ 0.52
TRIM13-201ENST00000356017 GOPCQ9HD26 462 aa18.28■□□□□ 0.52
TRIM13-201ENST00000356017 WDR19Q8NEZ3 1342 aa18.28■□□□□ 0.52
TRIM13-201ENST00000356017 CCL15-CCL14A0A0B4J2E2 113 aa18.27■□□□□ 0.52
TRIM13-201ENST00000356017 TESPA1A2RU30 521 aaPredicted RBP18.27■□□□□ 0.52
TRIM13-201ENST00000356017 IFIT3O14879 490 aaKnown RBP18.27■□□□□ 0.52
TRIM13-201ENST00000356017 HMGCS2P54868 508 aa18.27■□□□□ 0.52
TRIM13-201ENST00000356017 CCL15Q16663 113 aa18.27■□□□□ 0.52
TRIM13-201ENST00000356017 BLOC1S2Q6QNY1 142 aa18.27■□□□□ 0.52
TRIM13-201ENST00000356017 ANKS1AQ92625 1134 aa18.27■□□□□ 0.52
TRIM13-201ENST00000356017 LPAR1Q92633 364 aa18.27■□□□□ 0.52
TRIM13-201ENST00000356017 TMEM87BQ96K49 555 aa18.27■□□□□ 0.52
TRIM13-201ENST00000356017 C22orf23Q9BZE7 217 aa18.27■□□□□ 0.52
TRIM13-201ENST00000356017 GREB1LQ9C091 1923 aaPredicted RBP18.27■□□□□ 0.52
TRIM13-201ENST00000356017 TNKSO95271 1327 aa18.27■□□□□ 0.52
TRIM13-201ENST00000356017 PRC1O43663 620 aa18.27■□□□□ 0.51
TRIM13-201ENST00000356017 AOC2O75106 756 aa18.27■□□□□ 0.51
TRIM13-201ENST00000356017 TOP1P11387 765 aaKnown RBP18.27■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms