RNA–Protein interactions for RNA: ENST00000355560.4

CLK2-201, Transcript of CDC like kinase 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CLK2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-201ENST00000355560 PKN1Q16512 942 aa29.71■■■□□ 2.35
CLK2-201ENST00000355560 ANO1Q5XXA6 986 aa29.71■■■□□ 2.35
CLK2-201ENST00000355560 KCNG4Q8TDN1 519 aa29.71■■■□□ 2.35
CLK2-201ENST00000355560 V9GY48 417 aaPredicted RBP29.71■■■□□ 2.35
CLK2-201ENST00000355560 DIS3L2Q8IYB7 885 aaKnown RBP29.71■■■□□ 2.35
CLK2-201ENST00000355560 STX8Q9UNK0 236 aa29.71■■■□□ 2.35
CLK2-201ENST00000355560 hCG_1642624A0A1W2PR95 340 aa29.7■■■□□ 2.35
CLK2-201ENST00000355560 KIF5BP33176 963 aa29.7■■■□□ 2.35
CLK2-201ENST00000355560 SRBD1Q8N5C6 995 aaKnown RBP29.7■■■□□ 2.35
CLK2-201ENST00000355560 ZDHHC15Q96MV8 337 aa29.7■■■□□ 2.35
CLK2-201ENST00000355560 BTBD18B2RXH4 712 aa29.69■■■□□ 2.34
CLK2-201ENST00000355560 DPEP1P16444 411 aa29.69■■■□□ 2.34
CLK2-201ENST00000355560 SF3A1Q15459 793 aaKnown RBP29.69■■■□□ 2.34
CLK2-201ENST00000355560 CCDC93Q567U6 631 aa29.69■■■□□ 2.34
CLK2-201ENST00000355560 CCAR1Q8IX12 1150 aaKnown RBP29.69■■■□□ 2.34
CLK2-201ENST00000355560 PCDHA7Q9UN72 937 aa29.69■■■□□ 2.34
CLK2-201ENST00000355560 XBP1P17861 261 aa29.69■■■□□ 2.34
CLK2-201ENST00000355560 CAMK4Q16566 473 aa29.69■■■□□ 2.34
CLK2-201ENST00000355560 NOSTRINQ8IVI9 506 aa29.69■■■□□ 2.34
CLK2-201ENST00000355560 SPTLC2O15270 562 aa29.68■■■□□ 2.34
CLK2-201ENST00000355560 NEDD1Q8NHV4 660 aa29.68■■■□□ 2.34
CLK2-201ENST00000355560 KIF13BQ9NQT8 1826 aa29.68■■■□□ 2.34
CLK2-201ENST00000355560 KCNA3P22001 575 aa29.68■■■□□ 2.34
CLK2-201ENST00000355560 GRIPAP1Q4V328 841 aa29.68■■■□□ 2.34
CLK2-201ENST00000355560 KLHL34Q8N239 644 aa29.68■■■□□ 2.34
CLK2-201ENST00000355560 RNF214Q8ND24 703 aa29.68■■■□□ 2.34
CLK2-201ENST00000355560 MRIQ9BWK5 157 aa29.68■■■□□ 2.34
CLK2-201ENST00000355560 OSBPL5Q9H0X9 879 aaPredicted RBP29.68■■■□□ 2.34
CLK2-201ENST00000355560 TNMDQ9H2S6 317 aa29.68■■■□□ 2.34
CLK2-201ENST00000355560 FOXP1Q9H334 677 aaPredicted RBP29.68■■■□□ 2.34
CLK2-201ENST00000355560 VPS54Q9P1Q0 977 aa29.68■■■□□ 2.34
CLK2-201ENST00000355560 MAP3K14Q99558 947 aa29.67■■■□□ 2.34
CLK2-201ENST00000355560 RBM5P52756 815 aaKnown RBP eCLIP29.66■■■□□ 2.34
CLK2-201ENST00000355560 HDLBPQ00341 1268 aaKnown RBP29.66■■■□□ 2.34
CLK2-201ENST00000355560 GABPAQ06546 454 aa29.66■■■□□ 2.34
CLK2-201ENST00000355560 RTKN2Q8IZC4 609 aa29.66■■■□□ 2.34
CLK2-201ENST00000355560 SHISA4Q96DD7 197 aa29.66■■■□□ 2.34
CLK2-201ENST00000355560 TMEM47Q9BQJ4 181 aa29.66■■■□□ 2.34
CLK2-201ENST00000355560 GOLPH3LQ9H4A5 285 aa29.66■■■□□ 2.34
CLK2-201ENST00000355560 CLSTN2Q9H4D0 955 aa29.66■■■□□ 2.34
CLK2-201ENST00000355560 PCDHAC2Q9Y5I4 1007 aa29.66■■■□□ 2.34
CLK2-201ENST00000355560 MYH8P13535 1937 aa29.66■■■□□ 2.34
CLK2-201ENST00000355560 BAZ2BQ9UIF8 2168 aaKnown RBP29.66■■■□□ 2.34
CLK2-201ENST00000355560 NFIAQ12857 509 aa29.66■■■□□ 2.34
CLK2-201ENST00000355560 MAP3K11Q16584 847 aa29.66■■■□□ 2.34
CLK2-201ENST00000355560 ADALQ6DHV7 355 aa29.66■■■□□ 2.34
CLK2-201ENST00000355560 YDJCA8MPS7 323 aa29.65■■■□□ 2.34
CLK2-201ENST00000355560 CCDC73Q6ZRK6 1079 aa29.65■■■□□ 2.34
CLK2-201ENST00000355560 FUCA2Q9BTY2 467 aa29.65■■■□□ 2.34
CLK2-201ENST00000355560 ZBTB7AO95365 584 aa29.65■■■□□ 2.34
CLK2-201ENST00000355560 GRM4Q14833 912 aa29.65■■■□□ 2.34
CLK2-201ENST00000355560 CCDC125Q86Z20 511 aa29.65■■■□□ 2.34
CLK2-201ENST00000355560 SERPINB13Q9UIV8 391 aa29.65■■■□□ 2.34
CLK2-201ENST00000355560 NR5A1Q13285 461 aa29.64■■■□□ 2.34
CLK2-201ENST00000355560 SLC39A14Q15043 492 aa29.64■■■□□ 2.34
CLK2-201ENST00000355560 FSIP1Q8NA03 581 aa29.64■■■□□ 2.34
CLK2-201ENST00000355560 ANP32BQ92688 251 aaKnown RBP29.63■■■□□ 2.33
CLK2-201ENST00000355560 CEP95Q96GE4 821 aa29.63■■■□□ 2.33
CLK2-201ENST00000355560 PSMD1Q99460 953 aa29.63■■■□□ 2.33
CLK2-201ENST00000355560 PHF20Q9BVI0 1012 aa29.63■■■□□ 2.33
CLK2-201ENST00000355560 SERPINA10Q9UK55 444 aa29.63■■■□□ 2.33
CLK2-201ENST00000355560 A0A1W2PQ27 194 aa29.63■■■□□ 2.33
CLK2-201ENST00000355560 A0A1W2PQ64 194 aa29.63■■■□□ 2.33
CLK2-201ENST00000355560 A0A1W2PQD8 194 aa29.63■■■□□ 2.33
CLK2-201ENST00000355560 STAG2Q8N3U4 1231 aa29.63■■■□□ 2.33
CLK2-201ENST00000355560 OXER1Q8TDS5 423 aa29.63■■■□□ 2.33
CLK2-201ENST00000355560 MRPS27Q92552 414 aaKnown RBP29.63■■■□□ 2.33
CLK2-201ENST00000355560 MTMR7Q9Y216 660 aa29.63■■■□□ 2.33
CLK2-201ENST00000355560 MAD2L2Q9UI95 211 aa29.62■■■□□ 2.33
CLK2-201ENST00000355560 PLIN4Q96Q06 1357 aa29.62■■■□□ 2.33
CLK2-201ENST00000355560 PSME4Q14997 1843 aa29.62■■■□□ 2.33
CLK2-201ENST00000355560 HLA-DOAP06340 250 aa29.62■■■□□ 2.33
CLK2-201ENST00000355560 CACNB3P54284 484 aa29.62■■■□□ 2.33
CLK2-201ENST00000355560 FAM160A1Q05DH4 1040 aa29.62■■■□□ 2.33
CLK2-201ENST00000355560 SCG2P13521 617 aa29.61■■■□□ 2.33
CLK2-201ENST00000355560 SNW1Q13573 536 aaKnown RBP29.61■■■□□ 2.33
CLK2-201ENST00000355560 PTPAQ15257 358 aa29.61■■■□□ 2.33
CLK2-201ENST00000355560 CKAP2LQ8IYA6 745 aa29.61■■■□□ 2.33
CLK2-201ENST00000355560 PIBF1Q8WXW3 757 aa29.61■■■□□ 2.33
CLK2-201ENST00000355560 SWAP70Q9UH65 585 aa29.61■■■□□ 2.33
CLK2-201ENST00000355560 MARCKSP29966 332 aaPredicted RBP29.6■■■□□ 2.33
CLK2-201ENST00000355560 GNAQP50148 359 aa29.6■■■□□ 2.33
CLK2-201ENST00000355560 RBM43Q6ZSC3 357 aaKnown RBP29.6■■■□□ 2.33
CLK2-201ENST00000355560 CCDC192P0DO97 292 aa29.6■■■□□ 2.33
CLK2-201ENST00000355560 PFKFB3Q16875 520 aaPredicted RBP29.6■■■□□ 2.33
CLK2-201ENST00000355560 RILPL1Q5EBL4 403 aa29.6■■■□□ 2.33
CLK2-201ENST00000355560 ENGASEQ8NFI3 743 aa29.6■■■□□ 2.33
CLK2-201ENST00000355560 ZNF277Q9NRM2 450 aaPredicted RBP29.6■■■□□ 2.33
CLK2-201ENST00000355560 KRT2P35908 639 aa29.59■■■□□ 2.33
CLK2-201ENST00000355560 LARGE2Q8N3Y3 721 aa29.59■■■□□ 2.33
CLK2-201ENST00000355560 PPP6R2O75170 966 aa29.59■■■□□ 2.33
CLK2-201ENST00000355560 TOP1P11387 765 aaKnown RBP29.59■■■□□ 2.33
CLK2-201ENST00000355560 TOB1P50616 345 aaPredicted RBP29.59■■■□□ 2.33
CLK2-201ENST00000355560 ZFPM1Q8IX07 1006 aa29.59■■■□□ 2.33
CLK2-201ENST00000355560 JMYQ8N9B5 988 aa29.59■■■□□ 2.33
CLK2-201ENST00000355560 AKR1B1P15121 316 aa29.58■■■□□ 2.33
CLK2-201ENST00000355560 NOVP48745 357 aa29.58■■■□□ 2.33
CLK2-201ENST00000355560 TCP10Q12799 353 aa29.58■■■□□ 2.33
CLK2-201ENST00000355560 AXDND1Q5T1B0 1012 aaPredicted RBP29.58■■■□□ 2.33
CLK2-201ENST00000355560 IDI2Q9BXS1 227 aa29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms