RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 PGBD1Q96JS3 809 aa14.01□□□□□ -0.17
PCDHB11-201ENST00000354757 STOX1Q6ZVD7 989 aa14□□□□□ -0.17
PCDHB11-201ENST00000354757 MAEAQ7L5Y9 396 aa14□□□□□ -0.17
PCDHB11-201ENST00000354757 CCDC112Q8NEF3 446 aa14□□□□□ -0.17
PCDHB11-201ENST00000354757 TSG101Q99816 390 aa14□□□□□ -0.17
PCDHB11-201ENST00000354757 SEMA3EO15041 775 aa14□□□□□ -0.17
PCDHB11-201ENST00000354757 TBCAO75347 108 aaKnown RBP14□□□□□ -0.17
PCDHB11-201ENST00000354757 CDC25AP30304 524 aa14□□□□□ -0.17
PCDHB11-201ENST00000354757 USP8P40818 1118 aa14□□□□□ -0.17
PCDHB11-201ENST00000354757 CUL4AQ13619 759 aa14□□□□□ -0.17
PCDHB11-201ENST00000354757 FKBP15Q5T1M5 1219 aa14□□□□□ -0.17
PCDHB11-201ENST00000354757 TRERF1Q96PN7 1200 aa14□□□□□ -0.17
PCDHB11-201ENST00000354757 NEDD4P46934 1319 aa14□□□□□ -0.17
PCDHB11-201ENST00000354757 CYB5R4Q7L1T6 521 aa14□□□□□ -0.17
PCDHB11-201ENST00000354757 KIAA1328Q86T90 577 aa14□□□□□ -0.17
PCDHB11-201ENST00000354757 MYCLP12524 364 aaPredicted RBP13.99□□□□□ -0.17
PCDHB11-201ENST00000354757 ZNF827Q17R98 1081 aa13.99□□□□□ -0.17
PCDHB11-201ENST00000354757 NOSTRINQ8IVI9 506 aa13.99□□□□□ -0.17
PCDHB11-201ENST00000354757 REXO1Q8N1G1 1221 aaKnown RBP13.99□□□□□ -0.17
PCDHB11-201ENST00000354757 IFNKQ9P0W0 207 aa13.99□□□□□ -0.17
PCDHB11-201ENST00000354757 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.99□□□□□ -0.17
PCDHB11-201ENST00000354757 WTIPA6NIX2 430 aaPredicted RBP13.99□□□□□ -0.17
PCDHB11-201ENST00000354757 ADRA2BP18089 450 aa13.99□□□□□ -0.17
PCDHB11-201ENST00000354757 CCDC70Q6NSX1 233 aa13.99□□□□□ -0.17
PCDHB11-201ENST00000354757 CCDC94Q9BW85 323 aaPredicted RBP13.99□□□□□ -0.17
PCDHB11-201ENST00000354757 BLZF1Q9H2G9 400 aa13.99□□□□□ -0.17
PCDHB11-201ENST00000354757 NONOQ15233 471 aaKnown RBP eCLIP13.99□□□□□ -0.17
PCDHB11-201ENST00000354757 SLC27A3Q5K4L6 730 aa13.99□□□□□ -0.17
PCDHB11-201ENST00000354757 DYMQ7RTS9 669 aa13.99□□□□□ -0.17
PCDHB11-201ENST00000354757 PTGS1P23219 599 aa13.98□□□□□ -0.17
PCDHB11-201ENST00000354757 TRMT44Q8IYL2 757 aaKnown RBP13.98□□□□□ -0.17
PCDHB11-201ENST00000354757 ERMNQ8TAM6 284 aa13.98□□□□□ -0.17
PCDHB11-201ENST00000354757 SORBS3O60504 671 aa13.98□□□□□ -0.17
PCDHB11-201ENST00000354757 EZH2Q15910 746 aaKnown RBP13.98□□□□□ -0.17
PCDHB11-201ENST00000354757 SKIDA1Q1XH10 827 aa13.98□□□□□ -0.17
PCDHB11-201ENST00000354757 GSG1L2A8MUP6 293 aa13.98□□□□□ -0.17
PCDHB11-201ENST00000354757 TMEM232C9JQI7 657 aa13.98□□□□□ -0.17
PCDHB11-201ENST00000354757 PPP1R12BO60237 982 aaPredicted RBP13.98□□□□□ -0.17
PCDHB11-201ENST00000354757 SCG2P13521 617 aa13.98□□□□□ -0.17
PCDHB11-201ENST00000354757 ADCY7P51828 1080 aa13.98□□□□□ -0.17
PCDHB11-201ENST00000354757 R3HDM1Q15032 1099 aaKnown RBP13.98□□□□□ -0.17
PCDHB11-201ENST00000354757 C3orf67Q6ZVT6 689 aa13.98□□□□□ -0.17
PCDHB11-201ENST00000354757 PPP1R9BQ96SB3 815 aa13.98□□□□□ -0.17
PCDHB11-201ENST00000354757 KIF20BQ96Q89 1820 aa13.97□□□□□ -0.17
PCDHB11-201ENST00000354757 SH2B2O14492 632 aaPredicted RBP13.97□□□□□ -0.17
PCDHB11-201ENST00000354757 PLEKHA8P1O95397 391 aa13.97□□□□□ -0.17
PCDHB11-201ENST00000354757 PTPN14Q15678 1187 aa13.97□□□□□ -0.17
PCDHB11-201ENST00000354757 HS1BP3Q53T59 392 aa13.97□□□□□ -0.17
PCDHB11-201ENST00000354757 SMAP1Q8IYB5 467 aaPredicted RBP13.97□□□□□ -0.17
PCDHB11-201ENST00000354757 ZNF526Q8TF50 670 aaPredicted RBP13.97□□□□□ -0.17
PCDHB11-201ENST00000354757 TBC1D7Q9P0N9 293 aa13.97□□□□□ -0.17
PCDHB11-201ENST00000354757 CCT6AP40227 531 aaKnown RBP13.97□□□□□ -0.17
PCDHB11-201ENST00000354757 SNAP25P60880 206 aa13.97□□□□□ -0.17
PCDHB11-201ENST00000354757 UBXN2AP68543 259 aa13.97□□□□□ -0.17
PCDHB11-201ENST00000354757 CCDC93Q567U6 631 aa13.97□□□□□ -0.17
PCDHB11-201ENST00000354757 SLFN13Q68D06 897 aa13.97□□□□□ -0.17
PCDHB11-201ENST00000354757 CNKSR2Q8WXI2 1034 aa13.97□□□□□ -0.17
PCDHB11-201ENST00000354757 DCP1AQ9NPI6 582 aaPredicted RBP13.97□□□□□ -0.17
PCDHB11-201ENST00000354757 PCDHA7Q9UN72 937 aa13.97□□□□□ -0.17
PCDHB11-201ENST00000354757 ELP1O95163 1332 aa13.97□□□□□ -0.17
PCDHB11-201ENST00000354757 PSMA7O14818 248 aa13.97□□□□□ -0.17
PCDHB11-201ENST00000354757 BACH1O14867 736 aa13.97□□□□□ -0.17
PCDHB11-201ENST00000354757 ABCB5Q2M3G0 1257 aa13.97□□□□□ -0.17
PCDHB11-201ENST00000354757 ZNF609O15014 1411 aa13.97□□□□□ -0.17
PCDHB11-201ENST00000354757 TRIM21P19474 475 aaKnown RBP13.97□□□□□ -0.17
PCDHB11-201ENST00000354757 ARID5AQ03989 594 aa13.97□□□□□ -0.17
PCDHB11-201ENST00000354757 PNOCQ13519 176 aa13.97□□□□□ -0.17
PCDHB11-201ENST00000354757 TXNRD3Q86VQ6 643 aa13.97□□□□□ -0.17
PCDHB11-201ENST00000354757 COA7Q96BR5 231 aa13.97□□□□□ -0.17
PCDHB11-201ENST00000354757 COA1Q9GZY4 146 aa13.97□□□□□ -0.17
PCDHB11-201ENST00000354757 FAM170AA1A519 330 aa13.96□□□□□ -0.17
PCDHB11-201ENST00000354757 URI1O94763 535 aaPredicted RBP13.96□□□□□ -0.17
PCDHB11-201ENST00000354757 PFKFB1P16118 471 aa13.96□□□□□ -0.17
PCDHB11-201ENST00000354757 CERS3Q8IU89 383 aa13.96□□□□□ -0.17
PCDHB11-201ENST00000354757 SF3B3Q15393 1217 aaKnown RBP13.96□□□□□ -0.17
PCDHB11-201ENST00000354757 CLEC10AQ8IUN9 316 aa13.96□□□□□ -0.17
PCDHB11-201ENST00000354757 BLIDQ8IZY5 108 aa13.96□□□□□ -0.17
PCDHB11-201ENST00000354757 ZFP91Q96JP5 570 aaPredicted RBP13.96□□□□□ -0.17
PCDHB11-201ENST00000354757 SERTAD1Q9UHV2 236 aa13.96□□□□□ -0.17
PCDHB11-201ENST00000354757 ALAS1P13196 640 aa13.96□□□□□ -0.18
PCDHB11-201ENST00000354757 CDK8P49336 464 aa13.96□□□□□ -0.18
PCDHB11-201ENST00000354757 CC2D2BQ6DHV5 1058 aa13.96□□□□□ -0.18
PCDHB11-201ENST00000354757 NCAPH2Q6IBW4 605 aa13.96□□□□□ -0.18
PCDHB11-201ENST00000354757 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.96□□□□□ -0.18
PCDHB11-201ENST00000354757 PLA2G12BQ9BX93 195 aa13.96□□□□□ -0.18
PCDHB11-201ENST00000354757 LRWD1Q9UFC0 647 aa13.96□□□□□ -0.18
PCDHB11-201ENST00000354757 SNX29Q8TEQ0 813 aa13.95□□□□□ -0.18
PCDHB11-201ENST00000354757 BRIP1Q9BX63 1249 aa13.95□□□□□ -0.18
PCDHB11-201ENST00000354757 CLSTN2Q9H4D0 955 aa13.95□□□□□ -0.18
PCDHB11-201ENST00000354757 ZSWIM4Q9H7M6 989 aa13.95□□□□□ -0.18
PCDHB11-201ENST00000354757 ZBTB12Q9Y330 459 aaPredicted RBP13.95□□□□□ -0.18
PCDHB11-201ENST00000354757 SKILP12757 684 aa13.95□□□□□ -0.18
PCDHB11-201ENST00000354757 GOLGA6L1Q8N7Z2 621 aa13.95□□□□□ -0.18
PCDHB11-201ENST00000354757 PRIMPOLQ96LW4 560 aa13.95□□□□□ -0.18
PCDHB11-201ENST00000354757 SH2D4AQ9H788 454 aa13.95□□□□□ -0.18
PCDHB11-201ENST00000354757 USP42Q9H9J4 1324 aaKnown RBP13.95□□□□□ -0.18
PCDHB11-201ENST00000354757 CCDC66A2RUB6 948 aa13.95□□□□□ -0.18
PCDHB11-201ENST00000354757 WDHD1O75717 1129 aaPredicted RBP13.95□□□□□ -0.18
PCDHB11-201ENST00000354757 TNNT1P13805 278 aa13.95□□□□□ -0.18
PCDHB11-201ENST00000354757 PTGDRQ13258 359 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms