RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 SPECC1LQ69YQ0 1117 aa22.31■■□□□ 1.16
COL13A1-201ENST00000354547 DACH1Q9UI36 760 aa22.31■■□□□ 1.16
COL13A1-201ENST00000354547 CTR9Q6PD62 1173 aa22.31■■□□□ 1.16
COL13A1-201ENST00000354547 GNG11P61952 73 aa22.3■■□□□ 1.16
COL13A1-201ENST00000354547 DHX8Q14562 1220 aaKnown RBP22.3■■□□□ 1.16
COL13A1-201ENST00000354547 KARSQ15046 597 aaKnown RBP22.3■■□□□ 1.16
COL13A1-201ENST00000354547 TMEM139Q8IV31 216 aa22.3■■□□□ 1.16
COL13A1-201ENST00000354547 MNS1Q8NEH6 495 aa22.3■■□□□ 1.16
COL13A1-201ENST00000354547 ENOX1Q8TC92 643 aaKnown RBP22.3■■□□□ 1.16
COL13A1-201ENST00000354547 BLZF1Q9H2G9 400 aa22.3■■□□□ 1.16
COL13A1-201ENST00000354547 BAZ2AQ9UIF9 1905 aaKnown RBP22.3■■□□□ 1.16
COL13A1-201ENST00000354547 COL1A1P02452 1464 aaPredicted RBP22.3■■□□□ 1.16
COL13A1-201ENST00000354547 CD44P16070 742 aaKnown RBP22.3■■□□□ 1.16
COL13A1-201ENST00000354547 MTF1Q14872 753 aa22.3■■□□□ 1.16
COL13A1-201ENST00000354547 TC2NQ8N9U0 490 aa22.3■■□□□ 1.16
COL13A1-201ENST00000354547 EPC1Q9H2F5 836 aa22.3■■□□□ 1.16
COL13A1-201ENST00000354547 ZNF652Q9Y2D9 606 aa22.3■■□□□ 1.16
COL13A1-201ENST00000354547 CCP110O43303 1012 aa22.29■■□□□ 1.16
COL13A1-201ENST00000354547 KCNJ6P48051 423 aa22.29■■□□□ 1.16
COL13A1-201ENST00000354547 ZNF579Q8NAF0 562 aaKnown RBP22.29■■□□□ 1.16
COL13A1-201ENST00000354547 PHF20Q9BVI0 1012 aa22.29■■□□□ 1.16
COL13A1-201ENST00000354547 CARD6Q9BX69 1037 aa22.29■■□□□ 1.16
COL13A1-201ENST00000354547 ARHGAP6O43182 974 aa22.29■■□□□ 1.16
COL13A1-201ENST00000354547 ZNF18P17022 549 aa22.29■■□□□ 1.16
COL13A1-201ENST00000354547 CCDC93Q567U6 631 aa22.29■■□□□ 1.16
COL13A1-201ENST00000354547 LRP5O75197 1615 aa22.29■■□□□ 1.16
COL13A1-201ENST00000354547 STRCQ7RTU9 1775 aa22.29■■□□□ 1.16
COL13A1-201ENST00000354547 ADAMTS3O15072 1205 aa22.28■■□□□ 1.16
COL13A1-201ENST00000354547 ZSCAN12O43309 604 aa22.28■■□□□ 1.16
COL13A1-201ENST00000354547 TROAPQ12815 778 aa22.28■■□□□ 1.16
COL13A1-201ENST00000354547 PTGDRQ13258 359 aa22.28■■□□□ 1.16
COL13A1-201ENST00000354547 PIK3AP1Q6ZUJ8 805 aa22.28■■□□□ 1.16
COL13A1-201ENST00000354547 PAGE5Q96GU1 130 aa22.28■■□□□ 1.16
COL13A1-201ENST00000354547 MYH14Q7Z406 1995 aaKnown RBP22.28■■□□□ 1.16
COL13A1-201ENST00000354547 CDC25AP30304 524 aa22.28■■□□□ 1.16
COL13A1-201ENST00000354547 PLCD1P51178 756 aa22.28■■□□□ 1.16
COL13A1-201ENST00000354547 FUT2Q10981 343 aa22.28■■□□□ 1.16
COL13A1-201ENST00000354547 NT5DC1Q5TFE4 455 aa22.28■■□□□ 1.16
COL13A1-201ENST00000354547 KANK3Q6NY19 840 aa22.28■■□□□ 1.16
COL13A1-201ENST00000354547 WDR24Q96S15 920 aa22.28■■□□□ 1.16
COL13A1-201ENST00000354547 ST7Q9NRC1 585 aa22.28■■□□□ 1.16
COL13A1-201ENST00000354547 DOT1LQ8TEK3 1739 aa22.28■■□□□ 1.16
COL13A1-201ENST00000354547 NID2Q14112 1375 aa22.28■■□□□ 1.16
COL13A1-201ENST00000354547 DOCK2Q92608 1830 aa22.28■■□□□ 1.16
COL13A1-201ENST00000354547 PRDX5P30044 214 aa22.28■■□□□ 1.16
COL13A1-201ENST00000354547 MCM7P33993 719 aa22.28■■□□□ 1.16
COL13A1-201ENST00000354547 SRBD1Q8N5C6 995 aaKnown RBP22.28■■□□□ 1.16
COL13A1-201ENST00000354547 UBXN4Q92575 508 aa22.28■■□□□ 1.16
COL13A1-201ENST00000354547 BRMS1Q9HCU9 246 aa22.28■■□□□ 1.16
COL13A1-201ENST00000354547 ANAPC4Q9UJX5 808 aa22.28■■□□□ 1.16
COL13A1-201ENST00000354547 PRPF3O43395 683 aaKnown RBP22.27■■□□□ 1.16
COL13A1-201ENST00000354547 NLRP5P59047 1200 aa22.27■■□□□ 1.16
COL13A1-201ENST00000354547 MECOMQ03112 1051 aa22.27■■□□□ 1.16
COL13A1-201ENST00000354547 ZNF446Q9NWS9 450 aa22.27■■□□□ 1.16
COL13A1-201ENST00000354547 UBE4AQ14139 1066 aa22.27■■□□□ 1.16
COL13A1-201ENST00000354547 TTC38Q5R3I4 469 aa22.27■■□□□ 1.16
COL13A1-201ENST00000354547 ZNF804BA4D1E1 1349 aa22.27■■□□□ 1.16
COL13A1-201ENST00000354547 TBX2Q13207 712 aaPredicted RBP22.26■■□□□ 1.15
COL13A1-201ENST00000354547 CTCFLQ8NI51 663 aaPredicted RBP22.26■■□□□ 1.15
COL13A1-201ENST00000354547 IRX2Q9BZI1 471 aaPredicted RBP22.26■■□□□ 1.15
COL13A1-201ENST00000354547 BSDC1Q9NW68 430 aaPredicted RBP22.26■■□□□ 1.15
COL13A1-201ENST00000354547 MORC2Q9Y6X9 1032 aaPredicted RBP22.26■■□□□ 1.15
COL13A1-201ENST00000354547 MYH6P13533 1939 aa22.26■■□□□ 1.15
COL13A1-201ENST00000354547 SLFN14P0C7P3 912 aa22.25■■□□□ 1.15
COL13A1-201ENST00000354547 ZNF771Q7L3S4 317 aaPredicted RBP22.25■■□□□ 1.15
COL13A1-201ENST00000354547 MAPK8IP1Q9UQF2 711 aa22.25■■□□□ 1.15
COL13A1-201ENST00000354547 SPATA31A1Q5TZJ5 1347 aa22.25■■□□□ 1.15
COL13A1-201ENST00000354547 SOWAHDA6NJG2 315 aa22.25■■□□□ 1.15
COL13A1-201ENST00000354547 LZTFL1Q9NQ48 299 aa22.25■■□□□ 1.15
COL13A1-201ENST00000354547 SYNRGQ9UMZ2 1314 aa22.25■■□□□ 1.15
COL13A1-201ENST00000354547 ARAP2Q8WZ64 1704 aa22.25■■□□□ 1.15
COL13A1-201ENST00000354547 TIAM2Q8IVF5 1701 aa22.25■■□□□ 1.15
COL13A1-201ENST00000354547 PHLPP2Q6ZVD8 1323 aa22.25■■□□□ 1.15
COL13A1-201ENST00000354547 CASQ1P31415 396 aa22.25■■□□□ 1.15
COL13A1-201ENST00000354547 CCT6AP40227 531 aaKnown RBP22.25■■□□□ 1.15
COL13A1-201ENST00000354547 TBC1D9BQ66K14 1250 aa22.25■■□□□ 1.15
COL13A1-201ENST00000354547 TMTC3Q6ZXV5 915 aa22.25■■□□□ 1.15
COL13A1-201ENST00000354547 SLC51AQ86UW1 340 aa22.25■■□□□ 1.15
COL13A1-201ENST00000354547 KRT222Q8N1A0 295 aa22.25■■□□□ 1.15
COL13A1-201ENST00000354547 MTA3Q9BTC8 594 aa22.25■■□□□ 1.15
COL13A1-201ENST00000354547 TSPY2A6NKD2 308 aa22.24■■□□□ 1.15
COL13A1-201ENST00000354547 CLCN6P51797 869 aa22.24■■□□□ 1.15
COL13A1-201ENST00000354547 NR1I3Q14994 352 aa22.24■■□□□ 1.15
COL13A1-201ENST00000354547 TRIML1Q8N9V2 468 aa22.24■■□□□ 1.15
COL13A1-201ENST00000354547 LINC00116Q8NCU8 138 aa22.24■■□□□ 1.15
COL13A1-201ENST00000354547 NSUN4Q96CB9 384 aaKnown RBP22.24■■□□□ 1.15
COL13A1-201ENST00000354547 CCDC34Q96HJ3 373 aa22.24■■□□□ 1.15
COL13A1-201ENST00000354547 BRIP1Q9BX63 1249 aa22.24■■□□□ 1.15
COL13A1-201ENST00000354547 CTNND2Q9UQB3 1225 aa22.24■■□□□ 1.15
COL13A1-201ENST00000354547 A0A0U1RQJ8 604 aa22.24■■□□□ 1.15
COL13A1-201ENST00000354547 MYO1BO43795 1136 aa22.24■■□□□ 1.15
COL13A1-201ENST00000354547 RCAN1P53805 252 aa22.24■■□□□ 1.15
COL13A1-201ENST00000354547 ATRIPQ8WXE1 791 aa22.24■■□□□ 1.15
COL13A1-201ENST00000354547 GTPBP4Q9BZE4 634 aaKnown RBP22.24■■□□□ 1.15
COL13A1-201ENST00000354547 ZSWIM4Q9H7M6 989 aa22.24■■□□□ 1.15
COL13A1-201ENST00000354547 DCP1AQ9NPI6 582 aaPredicted RBP22.24■■□□□ 1.15
COL13A1-201ENST00000354547 SRP68Q9UHB9 627 aaKnown RBP22.24■■□□□ 1.15
COL13A1-201ENST00000354547 PARP3Q9Y6F1 533 aa22.24■■□□□ 1.15
COL13A1-201ENST00000354547 RBL2Q08999 1139 aa22.23■■□□□ 1.15
COL13A1-201ENST00000354547 ELOA2Q8IYF1 753 aaPredicted RBP22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms