RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 ERICH2A1L162 156 aa12.95□□□□□ -0.34
CAPN9-202ENST00000354537 TRIM75PA6NK02 468 aa12.95□□□□□ -0.34
CAPN9-202ENST00000354537 PPP1R3GB7ZBB8 358 aa12.95□□□□□ -0.34
CAPN9-202ENST00000354537 DPYDQ12882 1025 aa12.95□□□□□ -0.34
CAPN9-202ENST00000354537 WTAPQ15007 396 aa12.95□□□□□ -0.34
CAPN9-202ENST00000354537 PAGE5Q96GU1 130 aa12.95□□□□□ -0.34
CAPN9-202ENST00000354537 NACAP1Q9BZK3 213 aa12.95□□□□□ -0.34
CAPN9-202ENST00000354537 RASSF4Q9H2L5 321 aa12.95□□□□□ -0.34
CAPN9-202ENST00000354537 MKRN1Q9UHC7 482 aaKnown RBP12.95□□□□□ -0.34
CAPN9-202ENST00000354537 ITGA6P23229 1130 aa12.95□□□□□ -0.34
CAPN9-202ENST00000354537 GUCY1A2P33402 732 aa12.95□□□□□ -0.34
CAPN9-202ENST00000354537 MAP3K12Q12852 859 aa12.95□□□□□ -0.34
CAPN9-202ENST00000354537 ZNF827Q17R98 1081 aa12.95□□□□□ -0.34
CAPN9-202ENST00000354537 CYP26C1Q6V0L0 522 aa12.95□□□□□ -0.34
CAPN9-202ENST00000354537 LPIN2Q92539 896 aa12.95□□□□□ -0.34
CAPN9-202ENST00000354537 EPB41L4AQ9HCS5 686 aaPredicted RBP12.95□□□□□ -0.34
CAPN9-202ENST00000354537 KCNJ14Q9UNX9 436 aa12.95□□□□□ -0.34
CAPN9-202ENST00000354537 LMAN1P49257 510 aa12.94□□□□□ -0.34
CAPN9-202ENST00000354537 HSP90AA4PQ58FG1 418 aa12.94□□□□□ -0.34
CAPN9-202ENST00000354537 GIGYF2Q6Y7W6 1299 aaKnown RBP12.94□□□□□ -0.34
CAPN9-202ENST00000354537 FANCBQ8NB91 859 aa12.94□□□□□ -0.34
CAPN9-202ENST00000354537 FAM89AQ96GI7 184 aa12.94□□□□□ -0.34
CAPN9-202ENST00000354537 MYL10Q9BUA6 226 aa12.94□□□□□ -0.34
CAPN9-202ENST00000354537 IRX2Q9BZI1 471 aaPredicted RBP12.94□□□□□ -0.34
CAPN9-202ENST00000354537 PDE11AQ9HCR9 933 aa12.94□□□□□ -0.34
CAPN9-202ENST00000354537 CNNM1Q9NRU3 951 aa12.94□□□□□ -0.34
CAPN9-202ENST00000354537 RTL9Q8NET4 1388 aa12.94□□□□□ -0.34
CAPN9-202ENST00000354537 CASP14P31944 242 aa12.94□□□□□ -0.34
CAPN9-202ENST00000354537 CTSWP56202 376 aa12.94□□□□□ -0.34
CAPN9-202ENST00000354537 ZNF662Q6ZS27 426 aa12.94□□□□□ -0.34
CAPN9-202ENST00000354537 ANKRD20A12PQ8NF67 263 aa12.94□□□□□ -0.34
CAPN9-202ENST00000354537 PNKPQ96T60 521 aa12.94□□□□□ -0.34
CAPN9-202ENST00000354537 ABCB6Q9NP58 842 aa12.94□□□□□ -0.34
CAPN9-202ENST00000354537 ARAP2Q8WZ64 1704 aa12.93□□□□□ -0.34
CAPN9-202ENST00000354537 MROH5Q6ZUA9 1318 aa12.93□□□□□ -0.34
CAPN9-202ENST00000354537 GSG1L2A8MUP6 293 aa12.93□□□□□ -0.34
CAPN9-202ENST00000354537 GYPCP04921 128 aa12.93□□□□□ -0.34
CAPN9-202ENST00000354537 CD44P16070 742 aaKnown RBP12.93□□□□□ -0.34
CAPN9-202ENST00000354537 FGFR2P21802 821 aa12.93□□□□□ -0.34
CAPN9-202ENST00000354537 SEMA3FQ13275 785 aa12.93□□□□□ -0.34
CAPN9-202ENST00000354537 PUM3Q15397 648 aaKnown RBP12.93□□□□□ -0.34
CAPN9-202ENST00000354537 SRLQ86TD4 932 aa12.93□□□□□ -0.34
CAPN9-202ENST00000354537 GRAMD1CQ8IYS0 662 aa12.93□□□□□ -0.34
CAPN9-202ENST00000354537 SLC35F6Q8N357 371 aa12.93□□□□□ -0.34
CAPN9-202ENST00000354537 CTCFLQ8NI51 663 aaPredicted RBP12.93□□□□□ -0.34
CAPN9-202ENST00000354537 RPGRIP1Q96KN7 1286 aa12.93□□□□□ -0.34
CAPN9-202ENST00000354537 EFCC1Q9HA90 598 aa12.93□□□□□ -0.34
CAPN9-202ENST00000354537 SEC31BQ9NQW1 1179 aa12.93□□□□□ -0.34
CAPN9-202ENST00000354537 PUF60Q9UHX1 559 aaKnown RBP12.93□□□□□ -0.34
CAPN9-202ENST00000354537 RWDD2AQ9UIY3 292 aa12.93□□□□□ -0.34
CAPN9-202ENST00000354537 MYO5AQ9Y4I1 1855 aaKnown RBP12.93□□□□□ -0.34
CAPN9-202ENST00000354537 MYO1CO00159 1063 aa12.93□□□□□ -0.34
CAPN9-202ENST00000354537 AMPD2Q01433 879 aa12.93□□□□□ -0.34
CAPN9-202ENST00000354537 HSP90B2PQ58FF3 399 aa12.93□□□□□ -0.34
CAPN9-202ENST00000354537 CABP5Q9NP86 173 aa12.93□□□□□ -0.34
CAPN9-202ENST00000354537 ABHD10Q9NUJ1 306 aa12.93□□□□□ -0.34
CAPN9-202ENST00000354537 VPS18Q9P253 973 aa12.93□□□□□ -0.34
CAPN9-202ENST00000354537 LRP5O75197 1615 aa12.92□□□□□ -0.34
CAPN9-202ENST00000354537 COL22A1Q8NFW1 1626 aaPredicted RBP12.92□□□□□ -0.34
CAPN9-202ENST00000354537 DOCK2Q92608 1830 aa12.92□□□□□ -0.34
CAPN9-202ENST00000354537 UBE2Q2LH0YL09 131 aa12.92□□□□□ -0.34
CAPN9-202ENST00000354537 KRT2P35908 639 aa12.92□□□□□ -0.34
CAPN9-202ENST00000354537 ARHGAP25P42331 645 aa12.92□□□□□ -0.34
CAPN9-202ENST00000354537 AARSP49588 968 aaKnown RBP eCLIP12.92□□□□□ -0.34
CAPN9-202ENST00000354537 CTDSPL2Q05D32 466 aa12.92□□□□□ -0.34
CAPN9-202ENST00000354537 NR5A1Q13285 461 aa12.92□□□□□ -0.34
CAPN9-202ENST00000354537 CASP8Q14790 479 aa12.92□□□□□ -0.34
CAPN9-202ENST00000354537 NOM1Q5C9Z4 860 aaKnown RBP12.92□□□□□ -0.34
CAPN9-202ENST00000354537 CTR9Q6PD62 1173 aa12.92□□□□□ -0.34
CAPN9-202ENST00000354537 SPATA5Q8NB90 893 aa12.92□□□□□ -0.34
CAPN9-202ENST00000354537 PHF20Q9BVI0 1012 aa12.92□□□□□ -0.34
CAPN9-202ENST00000354537 MYO6Q9UM54 1294 aa12.92□□□□□ -0.34
CAPN9-202ENST00000354537 PRPF3O43395 683 aaKnown RBP12.91□□□□□ -0.34
CAPN9-202ENST00000354537 MBD4O95243 580 aa12.91□□□□□ -0.34
CAPN9-202ENST00000354537 PHKA1P46020 1223 aa12.91□□□□□ -0.34
CAPN9-202ENST00000354537 FXR1P51114 621 aaKnown RBP eCLIP12.91□□□□□ -0.34
CAPN9-202ENST00000354537 MCM6Q14566 821 aa12.91□□□□□ -0.34
CAPN9-202ENST00000354537 USP49Q70CQ1 688 aa12.91□□□□□ -0.34
CAPN9-202ENST00000354537 NLRP10Q86W26 655 aa12.91□□□□□ -0.34
CAPN9-202ENST00000354537 ZNF654Q8IZM8 581 aa12.91□□□□□ -0.34
CAPN9-202ENST00000354537 GREM2Q9H772 168 aa12.91□□□□□ -0.34
CAPN9-202ENST00000354537 ANAPC4Q9UJX5 808 aa12.91□□□□□ -0.34
CAPN9-202ENST00000354537 TACC3Q9Y6A5 838 aa12.91□□□□□ -0.34
CAPN9-202ENST00000354537 CHD4Q14839 1912 aa12.91□□□□□ -0.34
CAPN9-202ENST00000354537 DISP2A7MBM2 1401 aa12.91□□□□□ -0.34
CAPN9-202ENST00000354537 TARSL2A2RTX5 802 aaKnown RBP12.91□□□□□ -0.34
CAPN9-202ENST00000354537 PSMD14O00487 310 aa12.91□□□□□ -0.34
CAPN9-202ENST00000354537 AKAP17AQ02040 695 aaKnown RBP12.91□□□□□ -0.34
CAPN9-202ENST00000354537 CHRNA2Q15822 529 aa12.91□□□□□ -0.34
CAPN9-202ENST00000354537 MAP9Q49MG5 647 aa12.91□□□□□ -0.34
CAPN9-202ENST00000354537 RMND1Q9NWS8 449 aa12.91□□□□□ -0.34
CAPN9-202ENST00000354537 SPATA31A3Q5VYP0 1347 aa12.91□□□□□ -0.34
CAPN9-202ENST00000354537 ATF3P18847 181 aa12.9□□□□□ -0.34
CAPN9-202ENST00000354537 COPB1P53618 953 aaKnown RBP12.9□□□□□ -0.34
CAPN9-202ENST00000354537 VSNL1P62760 191 aa12.9□□□□□ -0.34
CAPN9-202ENST00000354537 KRT31Q15323 416 aa12.9□□□□□ -0.34
CAPN9-202ENST00000354537 CCDC148Q8NFR7 591 aa12.9□□□□□ -0.34
CAPN9-202ENST00000354537 OXER1Q8TDS5 423 aa12.9□□□□□ -0.34
CAPN9-202ENST00000354537 CPLX3Q8WVH0 158 aa12.9□□□□□ -0.34
CAPN9-202ENST00000354537 SYMPKQ92797 1274 aaKnown RBP12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms