RNA–Protein interactions for RNA: ENST00000354473.4

VPS72-201, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 3

Gene VPS72, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-201ENST00000354473 TRIM17Q9Y577 477 aa22.48■■□□□ 1.19
VPS72-201ENST00000354473 FOXP2O15409 715 aa22.47■■□□□ 1.19
VPS72-201ENST00000354473 SDSP20132 328 aa22.47■■□□□ 1.19
VPS72-201ENST00000354473 CAP1Q01518 475 aa22.47■■□□□ 1.19
VPS72-201ENST00000354473 MCMDC2Q4G0Z9 681 aa22.47■■□□□ 1.19
VPS72-201ENST00000354473 USP17L2Q6R6M4 530 aa22.47■■□□□ 1.19
VPS72-201ENST00000354473 OTOP1Q7RTM1 612 aa22.47■■□□□ 1.19
VPS72-201ENST00000354473 ACER1Q8TDN7 264 aa22.47■■□□□ 1.19
VPS72-201ENST00000354473 LACTBP83111 547 aaPredicted RBP22.46■■□□□ 1.19
VPS72-201ENST00000354473 VPS53Q5VIR6 699 aa22.46■■□□□ 1.19
VPS72-201ENST00000354473 KIAA1683Q9H0B3 1180 aa22.46■■□□□ 1.19
VPS72-201ENST00000354473 EFCC1Q9HA90 598 aa22.46■■□□□ 1.19
VPS72-201ENST00000354473 EMILIN3Q9NT22 766 aa22.46■■□□□ 1.19
VPS72-201ENST00000354473 BCRP11274 1271 aa22.45■■□□□ 1.18
VPS72-201ENST00000354473 OSBPP22059 807 aa22.45■■□□□ 1.18
VPS72-201ENST00000354473 USP14P54578 494 aa22.45■■□□□ 1.18
VPS72-201ENST00000354473 KIF22Q14807 665 aa22.45■■□□□ 1.18
VPS72-201ENST00000354473 TTC22Q5TAA0 569 aa22.45■■□□□ 1.18
VPS72-201ENST00000354473 CLEC10AQ8IUN9 316 aa22.45■■□□□ 1.18
VPS72-201ENST00000354473 ARHGAP39Q9C0H5 1083 aa22.45■■□□□ 1.18
VPS72-201ENST00000354473 ASCC2Q9H1I8 757 aaPredicted RBP22.45■■□□□ 1.18
VPS72-201ENST00000354473 DIAPH3Q9NSV4 1193 aa22.45■■□□□ 1.18
VPS72-201ENST00000354473 ECM2O94769 699 aaPredicted RBP22.44■■□□□ 1.18
VPS72-201ENST00000354473 GSPT1P15170 499 aaKnown RBP22.44■■□□□ 1.18
VPS72-201ENST00000354473 IRX3P78415 501 aaPredicted RBP22.44■■□□□ 1.18
VPS72-201ENST00000354473 ICA1Q05084 483 aa22.44■■□□□ 1.18
VPS72-201ENST00000354473 FBXO46Q6PJ61 603 aaPredicted RBP22.44■■□□□ 1.18
VPS72-201ENST00000354473 ZNF589Q86UQ0 364 aaPredicted RBP22.44■■□□□ 1.18
VPS72-201ENST00000354473 MKNK2Q9HBH9 465 aa22.44■■□□□ 1.18
VPS72-201ENST00000354473 CCDC171Q6TFL3 1326 aa22.44■■□□□ 1.18
VPS72-201ENST00000354473 GREB1LQ9C091 1923 aaPredicted RBP22.43■■□□□ 1.18
VPS72-201ENST00000354473 RASA1P20936 1047 aa22.43■■□□□ 1.18
VPS72-201ENST00000354473 HOXA7P31268 230 aaPredicted RBP22.43■■□□□ 1.18
VPS72-201ENST00000354473 PPARAQ07869 468 aa22.43■■□□□ 1.18
VPS72-201ENST00000354473 ARHGEF6Q15052 776 aa22.43■■□□□ 1.18
VPS72-201ENST00000354473 C12orf42Q96LP6 360 aa22.43■■□□□ 1.18
VPS72-201ENST00000354473 A0A1W2PRG0 241 aa22.42■■□□□ 1.18
VPS72-201ENST00000354473 HIP1O00291 1037 aa22.42■■□□□ 1.18
VPS72-201ENST00000354473 ZNF287Q9HBT7 754 aa22.42■■□□□ 1.18
VPS72-201ENST00000354473 HPS5Q9UPZ3 1129 aa22.42■■□□□ 1.18
VPS72-201ENST00000354473 MGAMO43451 1857 aa22.41■■□□□ 1.18
VPS72-201ENST00000354473 PRDM1O75626 825 aa22.41■■□□□ 1.18
VPS72-201ENST00000354473 SLC3A2P08195 630 aaKnown RBP22.41■■□□□ 1.18
VPS72-201ENST00000354473 VCAM1P19320 739 aa22.41■■□□□ 1.18
VPS72-201ENST00000354473 CWC27Q6UX04 472 aaKnown RBP22.41■■□□□ 1.18
VPS72-201ENST00000354473 CENPQQ7L2Z9 268 aaPredicted RBP22.41■■□□□ 1.18
VPS72-201ENST00000354473 ANKRD13CQ8N6S4 541 aa22.41■■□□□ 1.18
VPS72-201ENST00000354473 ARHGEF10LQ9HCE6 1279 aa22.41■■□□□ 1.18
VPS72-201ENST00000354473 CCDC85CA6NKD9 419 aa22.4■■□□□ 1.18
VPS72-201ENST00000354473 CTGFP29279 349 aa22.4■■□□□ 1.18
VPS72-201ENST00000354473 PSMC4P43686 418 aa22.4■■□□□ 1.18
VPS72-201ENST00000354473 GCLCP48506 637 aaPredicted RBP22.4■■□□□ 1.18
VPS72-201ENST00000354473 MFAP1P55081 439 aaKnown RBP22.4■■□□□ 1.18
VPS72-201ENST00000354473 PDE4BQ07343 736 aa22.4■■□□□ 1.18
VPS72-201ENST00000354473 SIAH1Q8IUQ4 282 aa22.4■■□□□ 1.18
VPS72-201ENST00000354473 TRIM47Q96LD4 638 aa22.4■■□□□ 1.18
VPS72-201ENST00000354473 KANSL2Q9H9L4 492 aa22.4■■□□□ 1.18
VPS72-201ENST00000354473 PTPN22Q9Y2R2 807 aa22.4■■□□□ 1.18
VPS72-201ENST00000354473 NEFLP07196 543 aa22.39■■□□□ 1.18
VPS72-201ENST00000354473 HSPD1P10809 573 aaKnown RBP22.39■■□□□ 1.18
VPS72-201ENST00000354473 HERVK_113P62684 666 aa22.39■■□□□ 1.18
VPS72-201ENST00000354473 ATP2B2Q01814 1243 aa22.39■■□□□ 1.18
VPS72-201ENST00000354473 ALX1Q15699 326 aa22.39■■□□□ 1.18
VPS72-201ENST00000354473 ZNF444Q8N0Y2 327 aaPredicted RBP22.39■■□□□ 1.18
VPS72-201ENST00000354473 P2RX7Q99572 595 aaKnown RBP22.39■■□□□ 1.18
VPS72-201ENST00000354473 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.39■■□□□ 1.18
VPS72-201ENST00000354473 SH2D4AQ9H788 454 aa22.39■■□□□ 1.18
VPS72-201ENST00000354473 USP17L15C9J2P7 530 aa22.38■■□□□ 1.17
VPS72-201ENST00000354473 USP17L13C9JLJ4 530 aa22.38■■□□□ 1.17
VPS72-201ENST00000354473 USP17L11C9JVI0 530 aa22.38■■□□□ 1.17
VPS72-201ENST00000354473 USP17L18D6R9N7 530 aa22.38■■□□□ 1.17
VPS72-201ENST00000354473 USP17L22D6RA61 530 aa22.38■■□□□ 1.17
VPS72-201ENST00000354473 USP17L17D6RBQ6 530 aa22.38■■□□□ 1.17
VPS72-201ENST00000354473 USP17L19D6RCP7 530 aa22.38■■□□□ 1.17
VPS72-201ENST00000354473 USP17L20D6RJB6 530 aa22.38■■□□□ 1.17
VPS72-201ENST00000354473 FMNL1O95466 1100 aaPredicted RBP22.38■■□□□ 1.17
VPS72-201ENST00000354473 GNRH1P01148 92 aa22.38■■□□□ 1.17
VPS72-201ENST00000354473 EEF2P13639 858 aaKnown RBP22.38■■□□□ 1.17
VPS72-201ENST00000354473 CTDSPL2Q05D32 466 aa22.38■■□□□ 1.17
VPS72-201ENST00000354473 USP17L24Q0WX57 530 aa22.38■■□□□ 1.17
VPS72-201ENST00000354473 FAM110CQ1W6H9 321 aa22.38■■□□□ 1.17
VPS72-201ENST00000354473 RPAP3Q9H6T3 665 aaPredicted RBP22.38■■□□□ 1.17
VPS72-201ENST00000354473 TMX2Q9Y320 296 aa22.38■■□□□ 1.17
VPS72-201ENST00000354473 ZMYM6O95789 1325 aa22.38■■□□□ 1.17
VPS72-201ENST00000354473 FGAP02671 866 aa22.37■■□□□ 1.17
VPS72-201ENST00000354473 FCGRTP55899 365 aa22.37■■□□□ 1.17
VPS72-201ENST00000354473 KIAA1755Q5JYT7 1200 aa22.36■■□□□ 1.17
VPS72-201ENST00000354473 ANAPC4Q9UJX5 808 aa22.36■■□□□ 1.17
VPS72-201ENST00000354473 CATSPERGQ6ZRH7 1159 aa22.35■■□□□ 1.17
VPS72-201ENST00000354473 SPICE1Q8N0Z3 855 aa22.35■■□□□ 1.17
VPS72-201ENST00000354473 LPAR1Q92633 364 aa22.35■■□□□ 1.17
VPS72-201ENST00000354473 CCDC136Q96JN2 1154 aa22.35■■□□□ 1.17
VPS72-201ENST00000354473 TANGO6Q9C0B7 1094 aa22.35■■□□□ 1.17
VPS72-201ENST00000354473 VCPKMTQ9H867 229 aa22.35■■□□□ 1.17
VPS72-201ENST00000354473 MORF4L1Q9UBU8 362 aa22.35■■□□□ 1.17
VPS72-201ENST00000354473 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.35■■□□□ 1.17
VPS72-201ENST00000354473 PTCH2Q9Y6C5 1203 aa22.35■■□□□ 1.17
VPS72-201ENST00000354473 MYH4Q9Y623 1939 aa22.35■■□□□ 1.17
VPS72-201ENST00000354473 IGKV6D-41A0A0C4DH26 115 aa22.34■■□□□ 1.17
VPS72-201ENST00000354473 CENPBP07199 599 aaPredicted RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 745.9 ms