RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 PDE4DIPQ5VU43 2346 aa13.82□□□□□ -0.2
CDRT1-202ENST00000354433 PRKAB2O43741 272 aa13.81□□□□□ -0.2
CDRT1-202ENST00000354433 ADCY3O60266 1144 aa13.81□□□□□ -0.2
CDRT1-202ENST00000354433 CYP2D6P10635 497 aa13.81□□□□□ -0.2
CDRT1-202ENST00000354433 ELNP15502 786 aa13.81□□□□□ -0.2
CDRT1-202ENST00000354433 USP14P54578 494 aa13.81□□□□□ -0.2
CDRT1-202ENST00000354433 HERVK_113P62684 666 aa13.81□□□□□ -0.2
CDRT1-202ENST00000354433 EVX2Q03828 476 aa13.81□□□□□ -0.2
CDRT1-202ENST00000354433 UBE3CQ15386 1083 aa13.81□□□□□ -0.2
CDRT1-202ENST00000354433 PLEKHM2Q8IWE5 1019 aa13.81□□□□□ -0.2
CDRT1-202ENST00000354433 CCAR1Q8IX12 1150 aaKnown RBP13.81□□□□□ -0.2
CDRT1-202ENST00000354433 PAGR1Q9BTK6 254 aa13.81□□□□□ -0.2
CDRT1-202ENST00000354433 KIAA0100Q14667 2235 aaKnown RBP13.81□□□□□ -0.2
CDRT1-202ENST00000354433 RBBP6Q7Z6E9 1792 aaKnown RBP13.8□□□□□ -0.2
CDRT1-202ENST00000354433 EIF5BO60841 1220 aaKnown RBP13.8□□□□□ -0.2
CDRT1-202ENST00000354433 HOXA7P31268 230 aaPredicted RBP13.8□□□□□ -0.2
CDRT1-202ENST00000354433 SLC44A5Q8NCS7 719 aa13.8□□□□□ -0.2
CDRT1-202ENST00000354433 P2RX7Q99572 595 aaKnown RBP13.8□□□□□ -0.2
CDRT1-202ENST00000354433 RNF208Q9H0X6 261 aa13.8□□□□□ -0.2
CDRT1-202ENST00000354433 CWC22Q9HCG8 908 aaKnown RBP13.8□□□□□ -0.2
CDRT1-202ENST00000354433 EMILIN3Q9NT22 766 aa13.8□□□□□ -0.2
CDRT1-202ENST00000354433 ATP8A2Q9NTI2 1148 aa13.8□□□□□ -0.2
CDRT1-202ENST00000354433 SLC4A4Q9Y6R1 1079 aa13.8□□□□□ -0.2
CDRT1-202ENST00000354433 MKI67P46013 3256 aaKnown RBP13.8□□□□□ -0.2
CDRT1-202ENST00000354433 TNRC18O15417 2968 aaPredicted RBP13.79□□□□□ -0.2
CDRT1-202ENST00000354433 CCL5P13501 91 aa13.79□□□□□ -0.2
CDRT1-202ENST00000354433 GABPAQ06546 454 aa13.79□□□□□ -0.2
CDRT1-202ENST00000354433 SEPT2Q15019 361 aa13.79□□□□□ -0.2
CDRT1-202ENST00000354433 DYNLL2Q96FJ2 89 aa13.79□□□□□ -0.2
CDRT1-202ENST00000354433 PUS7LQ9H0K6 701 aaKnown RBP13.79□□□□□ -0.2
CDRT1-202ENST00000354433 OSBPL3Q9H4L5 887 aa13.79□□□□□ -0.2
CDRT1-202ENST00000354433 SWAP70Q9UH65 585 aa13.79□□□□□ -0.2
CDRT1-202ENST00000354433 PEX10O60683 326 aa13.79□□□□□ -0.2
CDRT1-202ENST00000354433 INHAP05111 366 aa13.79□□□□□ -0.2
CDRT1-202ENST00000354433 VCAM1P19320 739 aa13.79□□□□□ -0.2
CDRT1-202ENST00000354433 IRF5Q13568 498 aa13.79□□□□□ -0.2
CDRT1-202ENST00000354433 KBTBD3Q8NAB2 608 aa13.79□□□□□ -0.2
CDRT1-202ENST00000354433 GPRC5AQ8NFJ5 357 aa13.79□□□□□ -0.2
CDRT1-202ENST00000354433 NKX2-3Q8TAU0 364 aa13.79□□□□□ -0.2
CDRT1-202ENST00000354433 ACER1Q8TDN7 264 aa13.79□□□□□ -0.2
CDRT1-202ENST00000354433 GTF3C2Q8WUA4 911 aaPredicted RBP13.79□□□□□ -0.2
CDRT1-202ENST00000354433 MORF4L1Q9UBU8 362 aa13.79□□□□□ -0.2
CDRT1-202ENST00000354433 MGAMO43451 1857 aa13.78□□□□□ -0.2
CDRT1-202ENST00000354433 CYP2D7A0A087X1C5 515 aa13.78□□□□□ -0.2
CDRT1-202ENST00000354433 USP17L15C9J2P7 530 aa13.78□□□□□ -0.2
CDRT1-202ENST00000354433 USP17L13C9JLJ4 530 aa13.78□□□□□ -0.2
CDRT1-202ENST00000354433 USP17L11C9JVI0 530 aa13.78□□□□□ -0.2
CDRT1-202ENST00000354433 USP17L18D6R9N7 530 aa13.78□□□□□ -0.2
CDRT1-202ENST00000354433 USP17L22D6RA61 530 aa13.78□□□□□ -0.2
CDRT1-202ENST00000354433 USP17L17D6RBQ6 530 aa13.78□□□□□ -0.2
CDRT1-202ENST00000354433 USP17L19D6RCP7 530 aa13.78□□□□□ -0.2
CDRT1-202ENST00000354433 USP17L20D6RJB6 530 aa13.78□□□□□ -0.2
CDRT1-202ENST00000354433 ERC2O15083 957 aa13.78□□□□□ -0.2
CDRT1-202ENST00000354433 USP17L24Q0WX57 530 aa13.78□□□□□ -0.2
CDRT1-202ENST00000354433 TMEM179Q6ZVK1 233 aa13.78□□□□□ -0.2
CDRT1-202ENST00000354433 PXYLP1Q8TE99 480 aa13.78□□□□□ -0.2
CDRT1-202ENST00000354433 C12orf42Q96LP6 360 aa13.78□□□□□ -0.2
CDRT1-202ENST00000354433 KIAA1683Q9H0B3 1180 aa13.78□□□□□ -0.2
CDRT1-202ENST00000354433 UPF2Q9HAU5 1272 aaKnown RBP13.78□□□□□ -0.2
CDRT1-202ENST00000354433 TXNRD2Q9NNW7 524 aa13.78□□□□□ -0.2
CDRT1-202ENST00000354433 USP17L12C9JPN9 530 aa13.77□□□□□ -0.21
CDRT1-202ENST00000354433 USP17L21D6R901 530 aa13.77□□□□□ -0.21
CDRT1-202ENST00000354433 ERVK-9P63128 1117 aa13.77□□□□□ -0.21
CDRT1-202ENST00000354433 ERVK-24P63145 666 aa13.77□□□□□ -0.21
CDRT1-202ENST00000354433 LRRFIP1Q32MZ4 808 aaKnown RBP13.77□□□□□ -0.21
CDRT1-202ENST00000354433 TTC22Q5TAA0 569 aa13.77□□□□□ -0.21
CDRT1-202ENST00000354433 WDR78Q5VTH9 848 aa13.77□□□□□ -0.21
CDRT1-202ENST00000354433 IPO9Q96P70 1041 aaKnown RBP13.77□□□□□ -0.21
CDRT1-202ENST00000354433 UNC93B1Q9H1C4 597 aa13.77□□□□□ -0.21
CDRT1-202ENST00000354433 RPAP3Q9H6T3 665 aaPredicted RBP13.77□□□□□ -0.21
CDRT1-202ENST00000354433 ARPP21Q9UBL0 812 aaPredicted RBP13.77□□□□□ -0.21
CDRT1-202ENST00000354433 TTC41PQ6P2S7 1318 aa13.76□□□□□ -0.21
CDRT1-202ENST00000354433 SALL3Q9BXA9 1300 aa13.76□□□□□ -0.21
CDRT1-202ENST00000354433 GJB1P08034 283 aa13.76□□□□□ -0.21
CDRT1-202ENST00000354433 AKR1B1P15121 316 aa13.76□□□□□ -0.21
CDRT1-202ENST00000354433 CYP2B6P20813 491 aa13.76□□□□□ -0.21
CDRT1-202ENST00000354433 GUCY1A2P33402 732 aa13.76□□□□□ -0.21
CDRT1-202ENST00000354433 ICA1Q05084 483 aa13.76□□□□□ -0.21
CDRT1-202ENST00000354433 C12orf60Q5U649 245 aa13.76□□□□□ -0.21
CDRT1-202ENST00000354433 U2AF1L4Q8WU68 220 aaKnown RBP13.76□□□□□ -0.21
CDRT1-202ENST00000354433 SOCS4Q8WXH5 440 aa13.76□□□□□ -0.21
CDRT1-202ENST00000354433 APPBP2Q92624 585 aa13.76□□□□□ -0.21
CDRT1-202ENST00000354433 TANGO6Q9C0B7 1094 aa13.76□□□□□ -0.21
CDRT1-202ENST00000354433 ARHGEF10LQ9HCE6 1279 aa13.76□□□□□ -0.21
CDRT1-202ENST00000354433 HMGCRP04035 888 aa13.75□□□□□ -0.21
CDRT1-202ENST00000354433 ZFYP08048 801 aaPredicted RBP13.75□□□□□ -0.21
CDRT1-202ENST00000354433 MAPK4P31152 587 aa13.75□□□□□ -0.21
CDRT1-202ENST00000354433 GJA8P48165 433 aa13.75□□□□□ -0.21
CDRT1-202ENST00000354433 ATP2B2Q01814 1243 aa13.75□□□□□ -0.21
CDRT1-202ENST00000354433 CLEC10AQ8IUN9 316 aa13.75□□□□□ -0.21
CDRT1-202ENST00000354433 STK11IPQ8N1F8 1099 aa13.75□□□□□ -0.21
CDRT1-202ENST00000354433 SHISA4Q96DD7 197 aa13.75□□□□□ -0.21
CDRT1-202ENST00000354433 NUDT12Q9BQG2 462 aa13.75□□□□□ -0.21
CDRT1-202ENST00000354433 FSD1Q9BTV5 496 aa13.75□□□□□ -0.21
CDRT1-202ENST00000354433 SH2D4AQ9H788 454 aa13.75□□□□□ -0.21
CDRT1-202ENST00000354433 RBPJLQ9UBG7 517 aa13.75□□□□□ -0.21
CDRT1-202ENST00000354433 SMIM22K7EJ46 135 aa13.75□□□□□ -0.21
CDRT1-202ENST00000354433 RNF113AO15541 343 aaKnown RBP13.75□□□□□ -0.21
CDRT1-202ENST00000354433 GPAA1O43292 621 aa13.75□□□□□ -0.21
CDRT1-202ENST00000354433 GLRX3O76003 335 aaKnown RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms