RNA–Protein interactions for RNA: ENST00000354098.7

SHMT1-203, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene SHMT1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-203ENST00000354098 MS4A4AQ96JQ5 239 aa26.19■■□□□ 1.78
SHMT1-203ENST00000354098 WDR18Q9BV38 432 aa26.19■■□□□ 1.78
SHMT1-203ENST00000354098 AS3MTQ9HBK9 375 aa26.19■■□□□ 1.78
SHMT1-203ENST00000354098 IL17RBQ9NRM6 502 aa26.19■■□□□ 1.78
SHMT1-203ENST00000354098 KCNH4Q9UQ05 1017 aa26.19■■□□□ 1.78
SHMT1-203ENST00000354098 KIF23Q02241 960 aaPredicted RBP26.19■■□□□ 1.78
SHMT1-203ENST00000354098 ICA1Q05084 483 aa26.19■■□□□ 1.78
SHMT1-203ENST00000354098 NOGQ13253 232 aa26.19■■□□□ 1.78
SHMT1-203ENST00000354098 COL9A3Q14050 684 aaPredicted RBP26.19■■□□□ 1.78
SHMT1-203ENST00000354098 CEP95Q96GE4 821 aa26.19■■□□□ 1.78
SHMT1-203ENST00000354098 KRT23Q9C075 422 aa26.19■■□□□ 1.78
SHMT1-203ENST00000354098 CNNM2Q9H8M5 875 aa26.19■■□□□ 1.78
SHMT1-203ENST00000354098 KANSL2Q9H9L4 492 aa26.19■■□□□ 1.78
SHMT1-203ENST00000354098 ZSWIM5Q9P217 1185 aa26.19■■□□□ 1.78
SHMT1-203ENST00000354098 GREB1LQ9C091 1923 aaPredicted RBP26.18■■□□□ 1.78
SHMT1-203ENST00000354098 PLIN4Q96Q06 1357 aa26.18■■□□□ 1.78
SHMT1-203ENST00000354098 A0A1W2PRG0 241 aa26.18■■□□□ 1.78
SHMT1-203ENST00000354098 DGKZQ13574 1117 aa26.18■■□□□ 1.78
SHMT1-203ENST00000354098 KCNB2Q92953 911 aa26.18■■□□□ 1.78
SHMT1-203ENST00000354098 EEF2P13639 858 aaKnown RBP26.17■■□□□ 1.78
SHMT1-203ENST00000354098 TRDNQ13061 729 aa26.17■■□□□ 1.78
SHMT1-203ENST00000354098 ZKSCAN3Q9BRR0 538 aa26.17■■□□□ 1.78
SHMT1-203ENST00000354098 TBC1D2Q9BYX2 928 aa26.17■■□□□ 1.78
SHMT1-203ENST00000354098 MTMR4Q9NYA4 1195 aa26.17■■□□□ 1.78
SHMT1-203ENST00000354098 CXCL11O14625 94 aa26.16■■□□□ 1.78
SHMT1-203ENST00000354098 ATP2B2Q01814 1243 aa26.16■■□□□ 1.78
SHMT1-203ENST00000354098 MTMR2Q13614 643 aa26.16■■□□□ 1.78
SHMT1-203ENST00000354098 ADCK5Q3MIX3 580 aa26.16■■□□□ 1.78
SHMT1-203ENST00000354098 TSGA10IPQ3SY00 556 aa26.16■■□□□ 1.78
SHMT1-203ENST00000354098 CYB5R4Q7L1T6 521 aa26.16■■□□□ 1.78
SHMT1-203ENST00000354098 NCOA7Q8NI08 942 aa26.16■■□□□ 1.78
SHMT1-203ENST00000354098 SNX14Q9Y5W7 946 aa26.16■■□□□ 1.78
SHMT1-203ENST00000354098 ZKSCAN1P17029 563 aaPredicted RBP26.15■■□□□ 1.78
SHMT1-203ENST00000354098 GTF2A2P52657 109 aa26.15■■□□□ 1.78
SHMT1-203ENST00000354098 BACE1P56817 501 aa26.15■■□□□ 1.78
SHMT1-203ENST00000354098 SNAPC2Q13487 334 aa26.15■■□□□ 1.78
SHMT1-203ENST00000354098 USP17L10C9JJH3 530 aa26.15■■□□□ 1.78
SHMT1-203ENST00000354098 ZYXQ15942 572 aaKnown RBP26.15■■□□□ 1.78
SHMT1-203ENST00000354098 RALYLQ86SE5 291 aaKnown RBP26.15■■□□□ 1.78
SHMT1-203ENST00000354098 CLIP2Q9UDT6 1046 aa26.15■■□□□ 1.78
SHMT1-203ENST00000354098 A0A0G2JLL6 359 aaPredicted RBP26.14■■□□□ 1.78
SHMT1-203ENST00000354098 HMGCS2P54868 508 aa26.14■■□□□ 1.78
SHMT1-203ENST00000354098 MOGSQ13724 837 aa26.14■■□□□ 1.78
SHMT1-203ENST00000354098 CHST3Q7LGC8 479 aa26.14■■□□□ 1.78
SHMT1-203ENST00000354098 PRRT2Q7Z6L0 340 aaPredicted RBP26.14■■□□□ 1.78
SHMT1-203ENST00000354098 MB21D2Q8IYB1 491 aaPredicted RBP26.14■■□□□ 1.78
SHMT1-203ENST00000354098 BRI3BPQ8WY22 251 aa26.14■■□□□ 1.78
SHMT1-203ENST00000354098 TCP11L1Q9NUJ3 509 aa26.14■■□□□ 1.78
SHMT1-203ENST00000354098 CCL15-CCL14A0A0B4J2E2 113 aa26.13■■□□□ 1.77
SHMT1-203ENST00000354098 MANSC4A6NHS7 340 aaPredicted RBP26.13■■□□□ 1.77
SHMT1-203ENST00000354098 EIF5BO60841 1220 aaKnown RBP26.13■■□□□ 1.77
SHMT1-203ENST00000354098 MAP2K2P36507 400 aa26.13■■□□□ 1.77
SHMT1-203ENST00000354098 CCL15Q16663 113 aa26.13■■□□□ 1.77
SHMT1-203ENST00000354098 FEZ1Q99689 392 aa26.13■■□□□ 1.77
SHMT1-203ENST00000354098 PTPN18Q99952 460 aa26.13■■□□□ 1.77
SHMT1-203ENST00000354098 ARHGEF10LQ9HCE6 1279 aa26.13■■□□□ 1.77
SHMT1-203ENST00000354098 NYAP2Q9P242 653 aa26.13■■□□□ 1.77
SHMT1-203ENST00000354098 CETPP11597 493 aa26.12■■□□□ 1.77
SHMT1-203ENST00000354098 KIAA1683Q9H0B3 1180 aa26.12■■□□□ 1.77
SHMT1-203ENST00000354098 STX8Q9UNK0 236 aa26.12■■□□□ 1.77
SHMT1-203ENST00000354098 TMX2Q9Y320 296 aa26.12■■□□□ 1.77
SHMT1-203ENST00000354098 TTLL1O95922 423 aa26.12■■□□□ 1.77
SHMT1-203ENST00000354098 MCCP23508 829 aa26.12■■□□□ 1.77
SHMT1-203ENST00000354098 ANTXR2P58335 489 aa26.12■■□□□ 1.77
SHMT1-203ENST00000354098 EMILIN3Q9NT22 766 aa26.12■■□□□ 1.77
SHMT1-203ENST00000354098 TESPA1A2RU30 521 aaPredicted RBP26.11■■□□□ 1.77
SHMT1-203ENST00000354098 C19orf81C9J6K1 198 aa26.11■■□□□ 1.77
SHMT1-203ENST00000354098 NOVP48745 357 aa26.11■■□□□ 1.77
SHMT1-203ENST00000354098 NT5C2P49902 561 aa26.11■■□□□ 1.77
SHMT1-203ENST00000354098 SH3D19Q5HYK7 790 aa26.11■■□□□ 1.77
SHMT1-203ENST00000354098 KIAA1755Q5JYT7 1200 aa26.11■■□□□ 1.77
SHMT1-203ENST00000354098 RCSD1Q6JBY9 416 aa26.11■■□□□ 1.77
SHMT1-203ENST00000354098 IQCA1Q86XH1 822 aa26.11■■□□□ 1.77
SHMT1-203ENST00000354098 NEK1Q96PY6 1258 aa26.11■■□□□ 1.77
SHMT1-203ENST00000354098 ZSCAN10Q96SZ4 725 aaPredicted RBP26.11■■□□□ 1.77
SHMT1-203ENST00000354098 PCNTO95613 3336 aa26.11■■□□□ 1.77
SHMT1-203ENST00000354098 TM4SF4P48230 202 aa26.1■■□□□ 1.77
SHMT1-203ENST00000354098 GADL1Q6ZQY3 521 aa26.1■■□□□ 1.77
SHMT1-203ENST00000354098 LRRC47Q8N1G4 583 aaKnown RBP26.1■■□□□ 1.77
SHMT1-203ENST00000354098 MKL1Q969V6 931 aa26.1■■□□□ 1.77
SHMT1-203ENST00000354098 PTPRFP10586 1907 aa26.1■■□□□ 1.77
SHMT1-203ENST00000354098 IGF2BP3O00425 579 aaKnown RBP eCLIP26.09■■□□□ 1.77
SHMT1-203ENST00000354098 SREBF2Q12772 1141 aa26.09■■□□□ 1.77
SHMT1-203ENST00000354098 KRT32Q14532 448 aa26.09■■□□□ 1.77
SHMT1-203ENST00000354098 BACH2Q9BYV9 841 aa26.09■■□□□ 1.77
SHMT1-203ENST00000354098 THSD7BQ9C0I4 1608 aa26.09■■□□□ 1.77
SHMT1-203ENST00000354098 TNKSO95271 1327 aa26.09■■□□□ 1.77
SHMT1-203ENST00000354098 INHBEP58166 350 aa26.09■■□□□ 1.77
SHMT1-203ENST00000354098 TREML2Q5T2D2 321 aa26.09■■□□□ 1.77
SHMT1-203ENST00000354098 GPAT2Q6NUI2 795 aa26.09■■□□□ 1.77
SHMT1-203ENST00000354098 USP17L2Q6R6M4 530 aa26.09■■□□□ 1.77
SHMT1-203ENST00000354098 ENAHQ8N8S7 591 aaPredicted RBP26.09■■□□□ 1.77
SHMT1-203ENST00000354098 JAKMIP1Q96N16 626 aaKnown RBP26.09■■□□□ 1.77
SHMT1-203ENST00000354098 UBAC1Q9BSL1 405 aa26.09■■□□□ 1.77
SHMT1-203ENST00000354098 BTBD19C9JJ37 291 aa26.08■■□□□ 1.77
SHMT1-203ENST00000354098 CPA1P15085 419 aa26.08■■□□□ 1.77
SHMT1-203ENST00000354098 USP14P54578 494 aa26.08■■□□□ 1.77
SHMT1-203ENST00000354098 FASTKD5Q7L8L6 764 aaKnown RBP26.08■■□□□ 1.77
SHMT1-203ENST00000354098 SPICE1Q8N0Z3 855 aa26.08■■□□□ 1.77
SHMT1-203ENST00000354098 FAM43AQ8N2R8 423 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms