RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 RGPD2P0DJD1 1756 aa20.14■□□□□ 0.81
APP-202ENST00000348990 MINDY4BA8MYZ0 360 aa20.14■□□□□ 0.81
APP-202ENST00000348990 ACTN4O43707 911 aaKnown RBP20.14■□□□□ 0.81
APP-202ENST00000348990 SYMPKQ92797 1274 aaKnown RBP20.14■□□□□ 0.81
APP-202ENST00000348990 DEF6Q9H4E7 631 aa20.14■□□□□ 0.81
APP-202ENST00000348990 SRPRBQ9Y5M8 271 aaKnown RBP20.14■□□□□ 0.81
APP-202ENST00000348990 LTN1O94822 1766 aa20.13■□□□□ 0.81
APP-202ENST00000348990 PRDM1O75626 825 aa20.13■□□□□ 0.81
APP-202ENST00000348990 MAGEA9P43362 315 aa20.13■□□□□ 0.81
APP-202ENST00000348990 FKBP15Q5T1M5 1219 aa20.13■□□□□ 0.81
APP-202ENST00000348990 EEF2KMTQ96G04 330 aa20.13■□□□□ 0.81
APP-202ENST00000348990 UBAC1Q9BSL1 405 aa20.13■□□□□ 0.81
APP-202ENST00000348990 JRKLQ9Y4A0 524 aa20.13■□□□□ 0.81
APP-202ENST00000348990 IPO7O95373 1038 aaKnown RBP20.13■□□□□ 0.81
APP-202ENST00000348990 PDE6AP16499 860 aa20.13■□□□□ 0.81
APP-202ENST00000348990 SARSP49591 514 aaKnown RBP20.13■□□□□ 0.81
APP-202ENST00000348990 TUBB2AQ13885 445 aa20.13■□□□□ 0.81
APP-202ENST00000348990 MAP9Q49MG5 647 aa20.13■□□□□ 0.81
APP-202ENST00000348990 CCDC122Q5T0U0 273 aa20.13■□□□□ 0.81
APP-202ENST00000348990 CHP1Q99653 195 aa20.13■□□□□ 0.81
APP-202ENST00000348990 TUBB2BQ9BVA1 445 aa20.13■□□□□ 0.81
APP-202ENST00000348990 XBP1P17861 261 aa20.12■□□□□ 0.81
APP-202ENST00000348990 ERVK-24P63145 666 aa20.12■□□□□ 0.81
APP-202ENST00000348990 MAGEB6Q8N7X4 407 aa20.12■□□□□ 0.81
APP-202ENST00000348990 DDX17Q92841 729 aaKnown RBP20.12■□□□□ 0.81
APP-202ENST00000348990 PAGE5Q96GU1 130 aa20.12■□□□□ 0.81
APP-202ENST00000348990 KDM6AO15550 1401 aaPredicted RBP20.12■□□□□ 0.81
APP-202ENST00000348990 IFNAR1P17181 557 aa20.12■□□□□ 0.81
APP-202ENST00000348990 MATR3P43243 847 aaKnown RBP eCLIP20.12■□□□□ 0.81
APP-202ENST00000348990 USP5P45974 858 aa20.12■□□□□ 0.81
APP-202ENST00000348990 KRT31Q15323 416 aa20.12■□□□□ 0.81
APP-202ENST00000348990 PACS2Q86VP3 889 aa20.12■□□□□ 0.81
APP-202ENST00000348990 JADE2Q9NQC1 790 aa20.12■□□□□ 0.81
APP-202ENST00000348990 STIM1Q13586 685 aa20.12■□□□□ 0.81
APP-202ENST00000348990 ICE2Q659A1 982 aa20.12■□□□□ 0.81
APP-202ENST00000348990 GPATCH11Q8N954 259 aa20.12■□□□□ 0.81
APP-202ENST00000348990 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.12■□□□□ 0.81
APP-202ENST00000348990 MED4Q9NPJ6 270 aa20.12■□□□□ 0.81
APP-202ENST00000348990 TUBB4BP68371 445 aa20.11■□□□□ 0.81
APP-202ENST00000348990 PPM1EQ8WY54 764 aa20.11■□□□□ 0.81
APP-202ENST00000348990 ABHD10Q9NUJ1 306 aa20.11■□□□□ 0.81
APP-202ENST00000348990 MYH15Q9Y2K3 1946 aa20.11■□□□□ 0.81
APP-202ENST00000348990 DEXIO95424 95 aa20.11■□□□□ 0.81
APP-202ENST00000348990 E2F4Q16254 413 aa20.11■□□□□ 0.81
APP-202ENST00000348990 EPN1Q9Y6I3 576 aaPredicted RBP20.11■□□□□ 0.81
APP-202ENST00000348990 PRKAB2O43741 272 aa20.11■□□□□ 0.81
APP-202ENST00000348990 PHKA1P46020 1223 aa20.11■□□□□ 0.81
APP-202ENST00000348990 MRPS25P82663 173 aaKnown RBP20.11■□□□□ 0.81
APP-202ENST00000348990 TTF1Q15361 905 aaPredicted RBP20.11■□□□□ 0.81
APP-202ENST00000348990 TTC19Q6DKK2 380 aaPredicted RBP20.11■□□□□ 0.81
APP-202ENST00000348990 IFNL3Q8IZI9 196 aa20.11■□□□□ 0.81
APP-202ENST00000348990 A0A087X0B3 334 aa20.1■□□□□ 0.81
APP-202ENST00000348990 CCDC196A0A1B0GTZ2 297 aa20.1■□□□□ 0.81
APP-202ENST00000348990 MIGA1Q8NAN2 632 aa20.1■□□□□ 0.81
APP-202ENST00000348990 FOXP1Q9H334 677 aaPredicted RBP20.1■□□□□ 0.81
APP-202ENST00000348990 WDR19Q8NEZ3 1342 aa20.1■□□□□ 0.81
APP-202ENST00000348990 RNF225M0QZC1 329 aaPredicted RBP20.1■□□□□ 0.81
APP-202ENST00000348990 NOP2P46087 812 aaKnown RBP20.1■□□□□ 0.81
APP-202ENST00000348990 GPIHBP1Q8IV16 184 aa20.1■□□□□ 0.81
APP-202ENST00000348990 ATG3Q9NT62 314 aa20.1■□□□□ 0.81
APP-202ENST00000348990 GNL3LQ9NVN8 582 aaKnown RBP20.1■□□□□ 0.81
APP-202ENST00000348990 ANKLE2Q86XL3 938 aa20.09■□□□□ 0.81
APP-202ENST00000348990 SAR1BQ9Y6B6 198 aa20.09■□□□□ 0.81
APP-202ENST00000348990 ITGA6P23229 1130 aa20.09■□□□□ 0.81
APP-202ENST00000348990 LIG3P49916 1009 aa20.09■□□□□ 0.81
APP-202ENST00000348990 NT5DC1Q5TFE4 455 aa20.09■□□□□ 0.81
APP-202ENST00000348990 MMS19Q96T76 1030 aa20.09■□□□□ 0.81
APP-202ENST00000348990 SNAP23O00161 211 aa20.09■□□□□ 0.81
APP-202ENST00000348990 CCT5P48643 541 aa20.09■□□□□ 0.81
APP-202ENST00000348990 COPB1P53618 953 aaKnown RBP20.09■□□□□ 0.81
APP-202ENST00000348990 EIF5P55010 431 aaKnown RBP20.09■□□□□ 0.81
APP-202ENST00000348990 AKNAD1Q5T1N1 836 aa20.09■□□□□ 0.81
APP-202ENST00000348990 IQUBQ8NA54 791 aa20.09■□□□□ 0.81
APP-202ENST00000348990 CCDC51Q96ER9 411 aa20.09■□□□□ 0.81
APP-202ENST00000348990 PLEKHG2Q9H7P9 1386 aa20.08■□□□□ 0.81
APP-202ENST00000348990 MACROD2A1Z1Q3 448 aa20.08■□□□□ 0.81
APP-202ENST00000348990 TUBBP07437 444 aa20.08■□□□□ 0.81
APP-202ENST00000348990 TICAM2Q86XR7 235 aa20.08■□□□□ 0.81
APP-202ENST00000348990 NACAP1Q9BZK3 213 aa20.08■□□□□ 0.81
APP-202ENST00000348990 LUC7L2Q9Y383 392 aaKnown RBP20.08■□□□□ 0.81
APP-202ENST00000348990 SLC4A4Q9Y6R1 1079 aa20.08■□□□□ 0.81
APP-202ENST00000348990 KCNJ18B7U540 433 aa20.08■□□□□ 0.8
APP-202ENST00000348990 KCNJ12Q14500 433 aa20.08■□□□□ 0.8
APP-202ENST00000348990 CCDC70Q6NSX1 233 aa20.08■□□□□ 0.8
APP-202ENST00000348990 CRACR2BQ8N4Y2 399 aaPredicted RBP20.08■□□□□ 0.8
APP-202ENST00000348990 STRBPQ96SI9 672 aaKnown RBP20.08■□□□□ 0.8
APP-202ENST00000348990 KRT23Q9C075 422 aa20.08■□□□□ 0.8
APP-202ENST00000348990 V9GY48 417 aaPredicted RBP20.08■□□□□ 0.8
APP-202ENST00000348990 PPFIA4O75335 1185 aa20.08■□□□□ 0.8
APP-202ENST00000348990 GGCXP38435 758 aa20.08■□□□□ 0.8
APP-202ENST00000348990 SGMS1Q86VZ5 419 aa20.08■□□□□ 0.8
APP-202ENST00000348990 FANCBQ8NB91 859 aa20.08■□□□□ 0.8
APP-202ENST00000348990 FAM76AQ8TAV0 307 aa20.08■□□□□ 0.8
APP-202ENST00000348990 NELFBQ8WX92 580 aa20.08■□□□□ 0.8
APP-202ENST00000348990 NDUFA10O95299 355 aa20.07■□□□□ 0.8
APP-202ENST00000348990 ATP1A1P05023 1023 aaKnown RBP20.07■□□□□ 0.8
APP-202ENST00000348990 LIFRP42702 1097 aa20.07■□□□□ 0.8
APP-202ENST00000348990 CTCFLQ8NI51 663 aaPredicted RBP20.07■□□□□ 0.8
APP-202ENST00000348990 GREM2Q9H772 168 aa20.07■□□□□ 0.8
APP-202ENST00000348990 STRN4Q9NRL3 753 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms