RNA–Protein interactions for RNA: ENST00000347662.8

TRAF3-201, Transcript of TNF receptor associated factor 3, humanhuman

TSL 5 BASIC

Gene TRAF3, Length 7,700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-201ENST00000347662 SDCCAG3Q96C92 435 aa13.08□□□□□ -0.32
TRAF3-201ENST00000347662 USH1CQ9Y6N9 552 aa13.08□□□□□ -0.32
TRAF3-201ENST00000347662 EIF2AK4Q9P2K8 1649 aaKnown RBP13.08□□□□□ -0.32
TRAF3-201ENST00000347662 TBC1D8O95759 1140 aa13.08□□□□□ -0.32
TRAF3-201ENST00000347662 ZFYVE16Q7Z3T8 1539 aa13.07□□□□□ -0.32
TRAF3-201ENST00000347662 PRPF6O94906 941 aaKnown RBP13.07□□□□□ -0.32
TRAF3-201ENST00000347662 OCM2P0CE71 109 aa13.07□□□□□ -0.32
TRAF3-201ENST00000347662 OCMP0CE72 109 aaPredicted RBP13.07□□□□□ -0.32
TRAF3-201ENST00000347662 STX17P56962 302 aa13.07□□□□□ -0.32
TRAF3-201ENST00000347662 GIMAP6Q6P9H5 292 aa13.07□□□□□ -0.32
TRAF3-201ENST00000347662 ZSCAN32Q9NX65 697 aa13.07□□□□□ -0.32
TRAF3-201ENST00000347662 AATFQ9NY61 560 aaKnown RBP eCLIP13.07□□□□□ -0.32
TRAF3-201ENST00000347662 DISP1Q96F81 1524 aa13.07□□□□□ -0.32
TRAF3-201ENST00000347662 GNAQP50148 359 aa13.07□□□□□ -0.32
TRAF3-201ENST00000347662 SCHIP1Q9P0W5 487 aaPredicted RBP13.07□□□□□ -0.32
TRAF3-201ENST00000347662 SBNO1A3KN83 1393 aa13.07□□□□□ -0.32
TRAF3-201ENST00000347662 PLEKHH1Q9ULM0 1364 aa13.07□□□□□ -0.32
TRAF3-201ENST00000347662 COL17A1Q9UMD9 1497 aaPredicted RBP13.07□□□□□ -0.32
TRAF3-201ENST00000347662 DDX39AO00148 427 aaKnown RBP13.07□□□□□ -0.32
TRAF3-201ENST00000347662 SYT1P21579 422 aa13.07□□□□□ -0.32
TRAF3-201ENST00000347662 CNGA4Q8IV77 575 aa13.07□□□□□ -0.32
TRAF3-201ENST00000347662 ZRANB2O95218 330 aaKnown RBP eCLIP13.07□□□□□ -0.32
TRAF3-201ENST00000347662 MYCLP12524 364 aaPredicted RBP13.07□□□□□ -0.32
TRAF3-201ENST00000347662 TRPC5Q9UL62 973 aaPredicted RBP13.07□□□□□ -0.32
TRAF3-201ENST00000347662 ANO6Q4KMQ2 910 aa13.07□□□□□ -0.32
TRAF3-201ENST00000347662 NR1H4Q96RI1 486 aaPredicted RBP13.07□□□□□ -0.32
TRAF3-201ENST00000347662 TRIM31Q9BZY9 425 aa13.07□□□□□ -0.32
TRAF3-201ENST00000347662 APOEP02649 317 aa13.07□□□□□ -0.32
TRAF3-201ENST00000347662 ARHGAP24Q8N264 748 aa13.07□□□□□ -0.32
TRAF3-201ENST00000347662 DCUN1D2Q6PH85 259 aa13.06□□□□□ -0.32
TRAF3-201ENST00000347662 FNBP4Q8N3X1 1017 aaPredicted RBP13.06□□□□□ -0.32
TRAF3-201ENST00000347662 METTL22Q9BUU2 404 aaPredicted RBP13.06□□□□□ -0.32
TRAF3-201ENST00000347662 DENND2AQ9ULE3 1009 aa13.06□□□□□ -0.32
TRAF3-201ENST00000347662 SLC12A1Q13621 1099 aa13.06□□□□□ -0.32
TRAF3-201ENST00000347662 RYBPQ8N488 228 aaPredicted RBP13.06□□□□□ -0.32
TRAF3-201ENST00000347662 PPP4R1Q8TF05 950 aa13.06□□□□□ -0.32
TRAF3-201ENST00000347662 NOX5Q96PH1 765 aa13.06□□□□□ -0.32
TRAF3-201ENST00000347662 TRIM35Q9UPQ4 493 aa13.06□□□□□ -0.32
TRAF3-201ENST00000347662 ARHGAP42A6NI28 874 aa13.06□□□□□ -0.32
TRAF3-201ENST00000347662 MGARPQ8TDB4 240 aa13.06□□□□□ -0.32
TRAF3-201ENST00000347662 RABEP2Q9H5N1 569 aa13.06□□□□□ -0.32
TRAF3-201ENST00000347662 STK38LQ9Y2H1 464 aa13.06□□□□□ -0.32
TRAF3-201ENST00000347662 NPR1P16066 1061 aa13.06□□□□□ -0.32
TRAF3-201ENST00000347662 CALML3P27482 149 aa13.06□□□□□ -0.32
TRAF3-201ENST00000347662 FCHSD1Q86WN1 690 aa13.06□□□□□ -0.32
TRAF3-201ENST00000347662 VSIG1Q86XK7 387 aa13.06□□□□□ -0.32
TRAF3-201ENST00000347662 DBN1Q16643 649 aa13.06□□□□□ -0.32
TRAF3-201ENST00000347662 TTC6Q86TZ1 520 aa13.06□□□□□ -0.32
TRAF3-201ENST00000347662 PALM2Q8IXS6 379 aa13.06□□□□□ -0.32
TRAF3-201ENST00000347662 RNF10Q8N5U6 811 aaKnown RBP13.06□□□□□ -0.32
TRAF3-201ENST00000347662 H7C1D1 291 aa13.06□□□□□ -0.32
TRAF3-201ENST00000347662 BAG2O95816 211 aa13.06□□□□□ -0.32
TRAF3-201ENST00000347662 KRT33BQ14525 404 aa13.06□□□□□ -0.32
TRAF3-201ENST00000347662 PUM3Q15397 648 aaKnown RBP13.06□□□□□ -0.32
TRAF3-201ENST00000347662 CPXCR1Q8N123 301 aa13.06□□□□□ -0.32
TRAF3-201ENST00000347662 AOPEPQ8N6M6 819 aa13.06□□□□□ -0.32
TRAF3-201ENST00000347662 HDAC11Q96DB2 347 aa13.06□□□□□ -0.32
TRAF3-201ENST00000347662 NDUFB9Q9Y6M9 179 aa13.06□□□□□ -0.32
TRAF3-201ENST00000347662 RNF113AO15541 343 aaKnown RBP13.05□□□□□ -0.32
TRAF3-201ENST00000347662 XPAP23025 273 aaPredicted RBP13.05□□□□□ -0.32
TRAF3-201ENST00000347662 EFCC1Q9HA90 598 aa13.05□□□□□ -0.32
TRAF3-201ENST00000347662 KRT2P35908 639 aa13.05□□□□□ -0.32
TRAF3-201ENST00000347662 CEP85Q6P2H3 762 aa13.05□□□□□ -0.32
TRAF3-201ENST00000347662 EDC4Q6P2E9 1401 aaKnown RBP13.05□□□□□ -0.32
TRAF3-201ENST00000347662 PTPDC1A2A3K4 754 aa13.05□□□□□ -0.32
TRAF3-201ENST00000347662 GNAT2P19087 354 aa13.05□□□□□ -0.32
TRAF3-201ENST00000347662 LGSNQ5TDP6 509 aa13.05□□□□□ -0.32
TRAF3-201ENST00000347662 PNMA2Q9UL42 364 aa13.05□□□□□ -0.32
TRAF3-201ENST00000347662 CCDC93Q567U6 631 aa13.05□□□□□ -0.32
TRAF3-201ENST00000347662 FAM180AQ6UWF9 173 aa13.05□□□□□ -0.32
TRAF3-201ENST00000347662 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.05□□□□□ -0.32
TRAF3-201ENST00000347662 UBL4BQ8N7F7 174 aa13.05□□□□□ -0.32
TRAF3-201ENST00000347662 RBSNQ9H1K0 784 aa13.05□□□□□ -0.32
TRAF3-201ENST00000347662 IL13P35225 146 aa13.05□□□□□ -0.32
TRAF3-201ENST00000347662 KSR1Q8IVT5 923 aa13.05□□□□□ -0.32
TRAF3-201ENST00000347662 ASIC3Q9UHC3 531 aa13.05□□□□□ -0.32
TRAF3-201ENST00000347662 NR1I2O75469 434 aa13.04□□□□□ -0.32
TRAF3-201ENST00000347662 FAM193BQ96PV7 902 aaPredicted RBP13.04□□□□□ -0.32
TRAF3-201ENST00000347662 ARMT1Q9H993 441 aa13.04□□□□□ -0.32
TRAF3-201ENST00000347662 SKILP12757 684 aa13.04□□□□□ -0.32
TRAF3-201ENST00000347662 MMEL1Q495T6 779 aa13.04□□□□□ -0.32
TRAF3-201ENST00000347662 RNF168Q8IYW5 571 aaPredicted RBP13.04□□□□□ -0.32
TRAF3-201ENST00000347662 PRDM1O75626 825 aa13.04□□□□□ -0.32
TRAF3-201ENST00000347662 RLBP1P12271 317 aa13.04□□□□□ -0.32
TRAF3-201ENST00000347662 KRT15P19012 456 aa13.04□□□□□ -0.32
TRAF3-201ENST00000347662 GTF2IP78347 998 aa13.04□□□□□ -0.32
TRAF3-201ENST00000347662 ESYT1Q9BSJ8 1104 aa13.04□□□□□ -0.32
TRAF3-201ENST00000347662 ARFGAP2Q8N6H7 521 aa13.04□□□□□ -0.32
TRAF3-201ENST00000347662 GBP5Q96PP8 586 aa13.04□□□□□ -0.32
TRAF3-201ENST00000347662 LMCD1Q9NZU5 365 aa13.04□□□□□ -0.32
TRAF3-201ENST00000347662 MAST1Q9Y2H9 1570 aa13.04□□□□□ -0.32
TRAF3-201ENST00000347662 ZNF335Q9H4Z2 1342 aaPredicted RBP13.04□□□□□ -0.32
TRAF3-201ENST00000347662 MYO5CQ9NQX4 1742 aa13.04□□□□□ -0.32
TRAF3-201ENST00000347662 A0A1B0GUA9 196 aa13.04□□□□□ -0.32
TRAF3-201ENST00000347662 RPL13P26373 211 aaKnown RBP13.04□□□□□ -0.32
TRAF3-201ENST00000347662 APOBRQ0VD83 1088 aa13.04□□□□□ -0.32
TRAF3-201ENST00000347662 DPY19L2Q6NUT2 758 aa13.04□□□□□ -0.32
TRAF3-201ENST00000347662 DTHD1Q6ZMT9 781 aa13.04□□□□□ -0.32
TRAF3-201ENST00000347662 UIMC1Q96RL1 719 aa13.04□□□□□ -0.32
TRAF3-201ENST00000347662 ZFYVE9O95405 1425 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms