RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 GMPSP49915 693 aaPredicted RBP12.8□□□□□ -0.36
ECM1-201ENST00000346569 NBR1Q14596 966 aa12.8□□□□□ -0.36
ECM1-201ENST00000346569 FAM83AQ86UY5 434 aa12.8□□□□□ -0.36
ECM1-201ENST00000346569 TMEM47Q9BQJ4 181 aa12.8□□□□□ -0.36
ECM1-201ENST00000346569 ANP32EQ9BTT0 268 aa12.8□□□□□ -0.36
ECM1-201ENST00000346569 CNTNAP1P78357 1384 aa12.8□□□□□ -0.36
ECM1-201ENST00000346569 TCP10L2B9ZVM9 353 aa12.79□□□□□ -0.36
ECM1-201ENST00000346569 FMNL1O95466 1100 aaPredicted RBP12.79□□□□□ -0.36
ECM1-201ENST00000346569 AKR1B1P15121 316 aa12.79□□□□□ -0.36
ECM1-201ENST00000346569 MAP3K10Q02779 954 aa12.79□□□□□ -0.36
ECM1-201ENST00000346569 CDC37L1Q7L3B6 337 aa12.79□□□□□ -0.36
ECM1-201ENST00000346569 NUP133Q8WUM0 1156 aa12.79□□□□□ -0.36
ECM1-201ENST00000346569 PHKBQ93100 1093 aa12.79□□□□□ -0.36
ECM1-201ENST00000346569 CEP95Q96GE4 821 aa12.79□□□□□ -0.36
ECM1-201ENST00000346569 CHAMP1Q96JM3 812 aa12.79□□□□□ -0.36
ECM1-201ENST00000346569 RBM28Q9NW13 759 aaKnown RBP12.79□□□□□ -0.36
ECM1-201ENST00000346569 MTMR4Q9NYA4 1195 aa12.79□□□□□ -0.36
ECM1-201ENST00000346569 TMOD2Q9NZR1 351 aa12.79□□□□□ -0.36
ECM1-201ENST00000346569 ZNF541Q9H0D2 1346 aa12.79□□□□□ -0.36
ECM1-201ENST00000346569 STK36Q9NRP7 1315 aa12.79□□□□□ -0.36
ECM1-201ENST00000346569 VPS37CA5D8V6 355 aaPredicted RBP12.79□□□□□ -0.36
ECM1-201ENST00000346569 EGFRP00533 1210 aa12.79□□□□□ -0.36
ECM1-201ENST00000346569 SSRP1Q08945 709 aaKnown RBP12.79□□□□□ -0.36
ECM1-201ENST00000346569 MICALL2Q8IY33 904 aa12.79□□□□□ -0.36
ECM1-201ENST00000346569 PNMA1Q8ND90 353 aa12.79□□□□□ -0.36
ECM1-201ENST00000346569 FBXO18Q8NFZ0 1043 aa12.79□□□□□ -0.36
ECM1-201ENST00000346569 KAT14Q9H8E8 782 aa12.79□□□□□ -0.36
ECM1-201ENST00000346569 GJA3Q9Y6H8 435 aa12.79□□□□□ -0.36
ECM1-201ENST00000346569 TBC1D12O60347 775 aa12.78□□□□□ -0.36
ECM1-201ENST00000346569 TOP1P11387 765 aaKnown RBP12.78□□□□□ -0.36
ECM1-201ENST00000346569 RESTQ13127 1097 aa12.78□□□□□ -0.36
ECM1-201ENST00000346569 ZSCAN29Q8IWY8 852 aaPredicted RBP12.78□□□□□ -0.36
ECM1-201ENST00000346569 GPC2Q8N158 579 aa12.78□□□□□ -0.36
ECM1-201ENST00000346569 SRBD1Q8N5C6 995 aaKnown RBP12.78□□□□□ -0.36
ECM1-201ENST00000346569 ZSCAN16Q9H4T2 348 aaPredicted RBP12.78□□□□□ -0.36
ECM1-201ENST00000346569 LMBRD1Q9NUN5 540 aa12.78□□□□□ -0.36
ECM1-201ENST00000346569 HERC5Q9UII4 1024 aaKnown RBP12.78□□□□□ -0.36
ECM1-201ENST00000346569 ATP6V1DQ9Y5K8 247 aa12.78□□□□□ -0.36
ECM1-201ENST00000346569 PALM3A6NDB9 673 aaPredicted RBP12.77□□□□□ -0.37
ECM1-201ENST00000346569 DDX11L8A8MPP1 907 aa12.77□□□□□ -0.37
ECM1-201ENST00000346569 H3BQV1 296 aa12.77□□□□□ -0.37
ECM1-201ENST00000346569 PRPF3O43395 683 aaKnown RBP12.77□□□□□ -0.37
ECM1-201ENST00000346569 MYO1BO43795 1136 aa12.77□□□□□ -0.37
ECM1-201ENST00000346569 GUCY1A2P33402 732 aa12.77□□□□□ -0.37
ECM1-201ENST00000346569 GRM4Q14833 912 aa12.77□□□□□ -0.37
ECM1-201ENST00000346569 CERKLQ49MI3 558 aaPredicted RBP12.77□□□□□ -0.37
ECM1-201ENST00000346569 IFFO2Q5TF58 517 aa12.77□□□□□ -0.37
ECM1-201ENST00000346569 MCTP1Q6DN14 999 aa12.77□□□□□ -0.37
ECM1-201ENST00000346569 TMTC3Q6ZXV5 915 aa12.77□□□□□ -0.37
ECM1-201ENST00000346569 SAMD7Q7Z3H4 446 aa12.77□□□□□ -0.37
ECM1-201ENST00000346569 CMTR1Q8N1G2 835 aaKnown RBP12.77□□□□□ -0.37
ECM1-201ENST00000346569 MKL1Q969V6 931 aa12.77□□□□□ -0.37
ECM1-201ENST00000346569 AIFM3Q96NN9 605 aa12.77□□□□□ -0.37
ECM1-201ENST00000346569 CSRNP1Q96S65 589 aa12.77□□□□□ -0.37
ECM1-201ENST00000346569 ALG1Q9BT22 464 aa12.77□□□□□ -0.37
ECM1-201ENST00000346569 SLC26A6Q9BXS9 759 aa12.77□□□□□ -0.37
ECM1-201ENST00000346569 RNF26Q9BY78 433 aaPredicted RBP12.77□□□□□ -0.37
ECM1-201ENST00000346569 MAD2L2Q9UI95 211 aa12.77□□□□□ -0.37
ECM1-201ENST00000346569 STX8Q9UNK0 236 aa12.77□□□□□ -0.37
ECM1-201ENST00000346569 SIPA1L1O43166 1804 aa12.76□□□□□ -0.37
ECM1-201ENST00000346569 FAM196BA6NMK8 535 aa12.76□□□□□ -0.37
ECM1-201ENST00000346569 UBE2Q2LH0YL09 131 aa12.76□□□□□ -0.37
ECM1-201ENST00000346569 H7C1D1 291 aa12.76□□□□□ -0.37
ECM1-201ENST00000346569 PLEKHA8P1O95397 391 aa12.76□□□□□ -0.37
ECM1-201ENST00000346569 PTMSP20962 102 aa12.76□□□□□ -0.37
ECM1-201ENST00000346569 RRP1BQ14684 758 aaKnown RBP12.76□□□□□ -0.37
ECM1-201ENST00000346569 PKN1Q16512 942 aa12.76□□□□□ -0.37
ECM1-201ENST00000346569 RBM26Q5T8P6 1007 aaKnown RBP12.76□□□□□ -0.37
ECM1-201ENST00000346569 OTUD7BQ6GQQ9 843 aa12.76□□□□□ -0.37
ECM1-201ENST00000346569 FERMT3Q86UX7 667 aa12.76□□□□□ -0.37
ECM1-201ENST00000346569 SIAH1Q8IUQ4 282 aa12.76□□□□□ -0.37
ECM1-201ENST00000346569 STAG2Q8N3U4 1231 aa12.76□□□□□ -0.37
ECM1-201ENST00000346569 CCDC82Q8N4S0 544 aa12.76□□□□□ -0.37
ECM1-201ENST00000346569 CTCFLQ8NI51 663 aaPredicted RBP12.76□□□□□ -0.37
ECM1-201ENST00000346569 C8orf76Q96K31 380 aa12.76□□□□□ -0.37
ECM1-201ENST00000346569 TMEM39BQ9GZU3 492 aa12.76□□□□□ -0.37
ECM1-201ENST00000346569 VEZTQ9HBM0 779 aa12.76□□□□□ -0.37
ECM1-201ENST00000346569 GJB4Q9NTQ9 266 aa12.76□□□□□ -0.37
ECM1-201ENST00000346569 GPRC5DQ9NZD1 345 aa12.76□□□□□ -0.37
ECM1-201ENST00000346569 NYAP2Q9P242 653 aa12.76□□□□□ -0.37
ECM1-201ENST00000346569 SBF1O95248 1867 aa12.76□□□□□ -0.37
ECM1-201ENST00000346569 DICER1Q9UPY3 1922 aaKnown RBP12.75□□□□□ -0.37
ECM1-201ENST00000346569 DEXIO95424 95 aa12.75□□□□□ -0.37
ECM1-201ENST00000346569 TTLL1O95922 423 aa12.75□□□□□ -0.37
ECM1-201ENST00000346569 SNHG28P0DPA3 235 aa12.75□□□□□ -0.37
ECM1-201ENST00000346569 KIF5BP33176 963 aa12.75□□□□□ -0.37
ECM1-201ENST00000346569 GNAQP50148 359 aa12.75□□□□□ -0.37
ECM1-201ENST00000346569 JAG1P78504 1218 aa12.75□□□□□ -0.37
ECM1-201ENST00000346569 TBC1D10BQ4KMP7 808 aaPredicted RBP12.75□□□□□ -0.37
ECM1-201ENST00000346569 PPP4R3BQ5MIZ7 849 aa12.75□□□□□ -0.37
ECM1-201ENST00000346569 TRIM22Q8IYM9 498 aa12.75□□□□□ -0.37
ECM1-201ENST00000346569 WASF1Q92558 559 aa12.75□□□□□ -0.37
ECM1-201ENST00000346569 TEPSINQ96N21 525 aa12.75□□□□□ -0.37
ECM1-201ENST00000346569 CLIP2Q9UDT6 1046 aa12.75□□□□□ -0.37
ECM1-201ENST00000346569 V9GY48 417 aaPredicted RBP12.75□□□□□ -0.37
ECM1-201ENST00000346569 GOLGA6L22H0YM25 854 aa12.74□□□□□ -0.37
ECM1-201ENST00000346569 SMARCA1P28370 1054 aa12.74□□□□□ -0.37
ECM1-201ENST00000346569 TNNI2P48788 182 aa12.74□□□□□ -0.37
ECM1-201ENST00000346569 GUCY1B3Q02153 619 aa12.74□□□□□ -0.37
ECM1-201ENST00000346569 DNM1Q05193 864 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms