RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 CPA4Q9UI42 421 aa23.77■■□□□ 1.4
CLTA-202ENST00000345519 PTPN22Q9Y2R2 807 aa23.77■■□□□ 1.4
CLTA-202ENST00000345519 PATL2C9JE40 543 aaKnown RBP23.76■■□□□ 1.39
CLTA-202ENST00000345519 CDK8P49336 464 aa23.76■■□□□ 1.39
CLTA-202ENST00000345519 IRX6P78412 446 aaPredicted RBP23.76■■□□□ 1.39
CLTA-202ENST00000345519 ARHGEF6Q15052 776 aa23.76■■□□□ 1.39
CLTA-202ENST00000345519 CCDC17Q96LX7 622 aa23.76■■□□□ 1.39
CLTA-202ENST00000345519 ARHGAP39Q9C0H5 1083 aa23.76■■□□□ 1.39
CLTA-202ENST00000345519 CABP5Q9NP86 173 aa23.76■■□□□ 1.39
CLTA-202ENST00000345519 EMILIN3Q9NT22 766 aa23.76■■□□□ 1.39
CLTA-202ENST00000345519 FAM110CQ1W6H9 321 aa23.75■■□□□ 1.39
CLTA-202ENST00000345519 USP17L2Q6R6M4 530 aa23.75■■□□□ 1.39
CLTA-202ENST00000345519 ASCC2Q9H1I8 757 aaPredicted RBP23.75■■□□□ 1.39
CLTA-202ENST00000345519 HELLSQ9NRZ9 838 aa23.75■■□□□ 1.39
CLTA-202ENST00000345519 USP14P54578 494 aa23.74■■□□□ 1.39
CLTA-202ENST00000345519 PRMT2P55345 433 aa23.74■■□□□ 1.39
CLTA-202ENST00000345519 SEPT2Q15019 361 aa23.74■■□□□ 1.39
CLTA-202ENST00000345519 RAB3GAP1Q15042 981 aa23.74■■□□□ 1.39
CLTA-202ENST00000345519 IFNL3Q8IZI9 196 aa23.74■■□□□ 1.39
CLTA-202ENST00000345519 TMOD4Q9NZQ9 345 aa23.74■■□□□ 1.39
CLTA-202ENST00000345519 AKR1B1P15121 316 aa23.73■■□□□ 1.39
CLTA-202ENST00000345519 GCLCP48506 637 aaPredicted RBP23.73■■□□□ 1.39
CLTA-202ENST00000345519 ACER1Q8TDN7 264 aa23.73■■□□□ 1.39
CLTA-202ENST00000345519 TRIM47Q96LD4 638 aa23.73■■□□□ 1.39
CLTA-202ENST00000345519 ZMYM6O95789 1325 aa23.73■■□□□ 1.39
CLTA-202ENST00000345519 PLIN4Q96Q06 1357 aa23.73■■□□□ 1.39
CLTA-202ENST00000345519 ZNF236Q9UL36 1845 aa23.73■■□□□ 1.39
CLTA-202ENST00000345519 A0A1W2PRG0 241 aa23.72■■□□□ 1.39
CLTA-202ENST00000345519 PDE4AP27815 886 aa23.72■■□□□ 1.39
CLTA-202ENST00000345519 RGS19P49795 217 aa23.72■■□□□ 1.39
CLTA-202ENST00000345519 KIF22Q14807 665 aa23.72■■□□□ 1.39
CLTA-202ENST00000345519 SIAH1Q8IUQ4 282 aa23.72■■□□□ 1.39
CLTA-202ENST00000345519 SMCR8Q8TEV9 937 aaPredicted RBP23.72■■□□□ 1.39
CLTA-202ENST00000345519 MORF4L1Q9UBU8 362 aa23.72■■□□□ 1.39
CLTA-202ENST00000345519 A0A0D9SFI3 127 aa23.71■■□□□ 1.39
CLTA-202ENST00000345519 OSBPP22059 807 aa23.71■■□□□ 1.39
CLTA-202ENST00000345519 ARMC5Q96C12 935 aa23.71■■□□□ 1.39
CLTA-202ENST00000345519 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.71■■□□□ 1.39
CLTA-202ENST00000345519 CAPN15O75808 1086 aa23.7■■□□□ 1.38
CLTA-202ENST00000345519 VCAM1P19320 739 aa23.7■■□□□ 1.38
CLTA-202ENST00000345519 RASA1P20936 1047 aa23.7■■□□□ 1.38
CLTA-202ENST00000345519 LBX2Q6XYB7 198 aa23.7■■□□□ 1.38
CLTA-202ENST00000345519 NACAP1Q9BZK3 213 aa23.7■■□□□ 1.38
CLTA-202ENST00000345519 CCDC85CA6NKD9 419 aa23.69■■□□□ 1.38
CLTA-202ENST00000345519 PSMC4P43686 418 aa23.69■■□□□ 1.38
CLTA-202ENST00000345519 TDO2P48775 406 aa23.69■■□□□ 1.38
CLTA-202ENST00000345519 ALX1Q15699 326 aa23.69■■□□□ 1.38
CLTA-202ENST00000345519 MCMDC2Q4G0Z9 681 aa23.69■■□□□ 1.38
CLTA-202ENST00000345519 GTF3C2Q8WUA4 911 aaPredicted RBP23.69■■□□□ 1.38
CLTA-202ENST00000345519 FAM227BQ96M60 508 aa23.69■■□□□ 1.38
CLTA-202ENST00000345519 SRRDQ9UH36 339 aa23.69■■□□□ 1.38
CLTA-202ENST00000345519 TMX2Q9Y320 296 aa23.69■■□□□ 1.38
CLTA-202ENST00000345519 KIAA0100Q14667 2235 aaKnown RBP23.69■■□□□ 1.38
CLTA-202ENST00000345519 HERVK_113P62684 666 aa23.68■■□□□ 1.38
CLTA-202ENST00000345519 ICA1Q05084 483 aa23.68■■□□□ 1.38
CLTA-202ENST00000345519 POTEEQ6S8J3 1075 aa23.68■■□□□ 1.38
CLTA-202ENST00000345519 CCDC129Q6ZRS4 1044 aa23.68■■□□□ 1.38
CLTA-202ENST00000345519 ANKRD13CQ8N6S4 541 aa23.68■■□□□ 1.38
CLTA-202ENST00000345519 FEZ1Q99689 392 aa23.68■■□□□ 1.38
CLTA-202ENST00000345519 ANAPC4Q9UJX5 808 aa23.68■■□□□ 1.38
CLTA-202ENST00000345519 PTCH2Q9Y6C5 1203 aa23.68■■□□□ 1.38
CLTA-202ENST00000345519 IGKV6D-41A0A0C4DH26 115 aa23.67■■□□□ 1.38
CLTA-202ENST00000345519 MPHOSPH10O00566 681 aaKnown RBP23.67■■□□□ 1.38
CLTA-202ENST00000345519 FCGRTP55899 365 aa23.67■■□□□ 1.38
CLTA-202ENST00000345519 IRX3P78415 501 aaPredicted RBP23.67■■□□□ 1.38
CLTA-202ENST00000345519 CATSPERGQ6ZRH7 1159 aa23.67■■□□□ 1.38
CLTA-202ENST00000345519 LPAR1Q92633 364 aa23.67■■□□□ 1.38
CLTA-202ENST00000345519 NAPBQ9H115 298 aa23.67■■□□□ 1.38
CLTA-202ENST00000345519 KANSL2Q9H9L4 492 aa23.67■■□□□ 1.38
CLTA-202ENST00000345519 TRIM6-TRIM34B2RNG4 842 aa23.66■■□□□ 1.38
CLTA-202ENST00000345519 USP17L15C9J2P7 530 aa23.66■■□□□ 1.38
CLTA-202ENST00000345519 USP17L13C9JLJ4 530 aa23.66■■□□□ 1.38
CLTA-202ENST00000345519 USP17L11C9JVI0 530 aa23.66■■□□□ 1.38
CLTA-202ENST00000345519 USP17L18D6R9N7 530 aa23.66■■□□□ 1.38
CLTA-202ENST00000345519 USP17L22D6RA61 530 aa23.66■■□□□ 1.38
CLTA-202ENST00000345519 USP17L17D6RBQ6 530 aa23.66■■□□□ 1.38
CLTA-202ENST00000345519 USP17L19D6RCP7 530 aa23.66■■□□□ 1.38
CLTA-202ENST00000345519 USP17L20D6RJB6 530 aa23.66■■□□□ 1.38
CLTA-202ENST00000345519 SDSP20132 328 aa23.66■■□□□ 1.38
CLTA-202ENST00000345519 USP17L24Q0WX57 530 aa23.66■■□□□ 1.38
CLTA-202ENST00000345519 NMIQ13287 307 aaPredicted RBP23.66■■□□□ 1.38
CLTA-202ENST00000345519 VPS53Q5VIR6 699 aa23.66■■□□□ 1.38
CLTA-202ENST00000345519 ZNF589Q86UQ0 364 aaPredicted RBP23.66■■□□□ 1.38
CLTA-202ENST00000345519 P2RX7Q99572 595 aaKnown RBP23.66■■□□□ 1.38
CLTA-202ENST00000345519 SH2D4AQ9H788 454 aa23.66■■□□□ 1.38
CLTA-202ENST00000345519 ZNF287Q9HBT7 754 aa23.66■■□□□ 1.38
CLTA-202ENST00000345519 ARHGEF10LQ9HCE6 1279 aa23.66■■□□□ 1.38
CLTA-202ENST00000345519 ZNFX1Q9P2E3 1918 aaKnown RBP23.66■■□□□ 1.38
CLTA-202ENST00000345519 CCDC171Q6TFL3 1326 aa23.65■■□□□ 1.38
CLTA-202ENST00000345519 MINDY4BA8MYZ0 360 aa23.65■■□□□ 1.38
CLTA-202ENST00000345519 APPP05067 770 aa23.65■■□□□ 1.38
CLTA-202ENST00000345519 FGRP09769 529 aa23.65■■□□□ 1.38
CLTA-202ENST00000345519 GSPT1P15170 499 aaKnown RBP23.65■■□□□ 1.38
CLTA-202ENST00000345519 PPARAQ07869 468 aa23.65■■□□□ 1.38
CLTA-202ENST00000345519 CLEC10AQ8IUN9 316 aa23.65■■□□□ 1.38
CLTA-202ENST00000345519 ZNF333Q96JL9 665 aa23.65■■□□□ 1.38
CLTA-202ENST00000345519 VCPKMTQ9H867 229 aa23.65■■□□□ 1.38
CLTA-202ENST00000345519 TXNRD2Q9NNW7 524 aa23.65■■□□□ 1.38
CLTA-202ENST00000345519 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.65■■□□□ 1.38
CLTA-202ENST00000345519 MYPNQ86TC9 1320 aa23.64■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms