RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 USP2O75604 605 aaPredicted RBP12.42□□□□□ -0.42
TPM3-207ENST00000341372 GUCA2AQ02747 115 aa12.42□□□□□ -0.42
TPM3-207ENST00000341372 MAP3K12Q12852 859 aa12.42□□□□□ -0.42
TPM3-207ENST00000341372 HOOK2Q96ED9 719 aa12.42□□□□□ -0.42
TPM3-207ENST00000341372 DDX60LQ5H9U9 1706 aaKnown RBP12.41□□□□□ -0.42
TPM3-207ENST00000341372 IDH1O75874 414 aaKnown RBP12.41□□□□□ -0.42
TPM3-207ENST00000341372 RGS3P49796 1198 aa12.41□□□□□ -0.42
TPM3-207ENST00000341372 ZNF157P51786 506 aaPredicted RBP12.41□□□□□ -0.42
TPM3-207ENST00000341372 DNAJC2Q99543 621 aaKnown RBP12.41□□□□□ -0.42
TPM3-207ENST00000341372 BOLA2Q9H3K6 86 aa12.41□□□□□ -0.42
TPM3-207ENST00000341372 DDX4Q9NQI0 724 aaKnown RBP12.41□□□□□ -0.42
TPM3-207ENST00000341372 TTC41PQ6P2S7 1318 aa12.41□□□□□ -0.42
TPM3-207ENST00000341372 AK9Q5TCS8 1911 aa12.41□□□□□ -0.42
TPM3-207ENST00000341372 SIPA1L1O43166 1804 aa12.4□□□□□ -0.42
TPM3-207ENST00000341372 FDX1P10109 184 aa12.4□□□□□ -0.42
TPM3-207ENST00000341372 HLA-CQ95604 372 aa12.4□□□□□ -0.42
TPM3-207ENST00000341372 GPATCH3Q96I76 525 aa12.4□□□□□ -0.42
TPM3-207ENST00000341372 RWDD1Q9H446 243 aaPredicted RBP12.4□□□□□ -0.42
TPM3-207ENST00000341372 PAG1Q9NWQ8 432 aa12.4□□□□□ -0.42
TPM3-207ENST00000341372 FZD1Q9UP38 647 aa12.4□□□□□ -0.42
TPM3-207ENST00000341372 CFAP99D6REC4 459 aa12.4□□□□□ -0.42
TPM3-207ENST00000341372 GOLIM4O00461 696 aa12.4□□□□□ -0.42
TPM3-207ENST00000341372 AOC2O75106 756 aa12.4□□□□□ -0.42
TPM3-207ENST00000341372 BAG3O95817 575 aa12.4□□□□□ -0.42
TPM3-207ENST00000341372 NEFLP07196 543 aa12.4□□□□□ -0.42
TPM3-207ENST00000341372 PLCG2P16885 1265 aa12.4□□□□□ -0.42
TPM3-207ENST00000341372 IREB2P48200 963 aaKnown RBP12.4□□□□□ -0.42
TPM3-207ENST00000341372 PTK7Q13308 1070 aa12.4□□□□□ -0.42
TPM3-207ENST00000341372 PRKG1Q13976 671 aa12.4□□□□□ -0.42
TPM3-207ENST00000341372 NR6A1Q15406 480 aa12.4□□□□□ -0.42
TPM3-207ENST00000341372 SH3BP5LQ7L8J4 393 aa12.4□□□□□ -0.42
TPM3-207ENST00000341372 MAGEB6Q8N7X4 407 aa12.4□□□□□ -0.42
TPM3-207ENST00000341372 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.4□□□□□ -0.42
TPM3-207ENST00000341372 EDC3Q96F86 508 aaKnown RBP12.4□□□□□ -0.42
TPM3-207ENST00000341372 WBP1LQ9NX94 342 aa12.4□□□□□ -0.42
TPM3-207ENST00000341372 TCRBV5S4A2TA0A5A2 114 aa12.39□□□□□ -0.43
TPM3-207ENST00000341372 USP17L5A8MUK1 530 aa12.39□□□□□ -0.43
TPM3-207ENST00000341372 HOXA2O43364 376 aa12.39□□□□□ -0.43
TPM3-207ENST00000341372 IGHDP01880 384 aa12.39□□□□□ -0.43
TPM3-207ENST00000341372 HSPA1AP0DMV8 641 aaKnown RBP12.39□□□□□ -0.43
TPM3-207ENST00000341372 HSPA1BP0DMV9 641 aaKnown RBP12.39□□□□□ -0.43
TPM3-207ENST00000341372 CYP7A1P22680 504 aa12.39□□□□□ -0.43
TPM3-207ENST00000341372 IRX5P78411 483 aaPredicted RBP12.39□□□□□ -0.43
TPM3-207ENST00000341372 MAP2K1Q02750 393 aaPredicted RBP12.39□□□□□ -0.43
TPM3-207ENST00000341372 MAP3K10Q02779 954 aa12.39□□□□□ -0.43
TPM3-207ENST00000341372 TCP10Q12799 353 aa12.39□□□□□ -0.43
TPM3-207ENST00000341372 DCAF15Q66K64 600 aa12.39□□□□□ -0.43
TPM3-207ENST00000341372 ZFPM1Q8IX07 1006 aa12.39□□□□□ -0.43
TPM3-207ENST00000341372 SH3RF3Q8TEJ3 882 aaPredicted RBP12.39□□□□□ -0.43
TPM3-207ENST00000341372 NOL10Q9BSC4 688 aaKnown RBP12.39□□□□□ -0.43
TPM3-207ENST00000341372 AATFQ9NY61 560 aaKnown RBP eCLIP12.39□□□□□ -0.43
TPM3-207ENST00000341372 PDE6AP16499 860 aa12.38□□□□□ -0.43
TPM3-207ENST00000341372 PRSS12P56730 875 aa12.38□□□□□ -0.43
TPM3-207ENST00000341372 PI4K2BQ8TCG2 481 aa12.38□□□□□ -0.43
TPM3-207ENST00000341372 OTUD7AQ8TE49 926 aaPredicted RBP12.38□□□□□ -0.43
TPM3-207ENST00000341372 ZIC5Q96T25 663 aa12.38□□□□□ -0.43
TPM3-207ENST00000341372 OSBPL5Q9H0X9 879 aaPredicted RBP12.38□□□□□ -0.43
TPM3-207ENST00000341372 MARCH6O60337 910 aa12.38□□□□□ -0.43
TPM3-207ENST00000341372 GRM1Q13255 1194 aa12.38□□□□□ -0.43
TPM3-207ENST00000341372 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.38□□□□□ -0.43
TPM3-207ENST00000341372 TEX11Q8IYF3 940 aa12.38□□□□□ -0.43
TPM3-207ENST00000341372 PIK3R5Q8WYR1 880 aa12.38□□□□□ -0.43
TPM3-207ENST00000341372 CLMNQ96JQ2 1002 aa12.38□□□□□ -0.43
TPM3-207ENST00000341372 RIOK1Q9BRS2 568 aaKnown RBP12.38□□□□□ -0.43
TPM3-207ENST00000341372 ZNF112Q9UJU3 913 aa12.38□□□□□ -0.43
TPM3-207ENST00000341372 NAV1Q8NEY1 1877 aa12.37□□□□□ -0.43
TPM3-207ENST00000341372 DDTLA6NHG4 134 aaPredicted RBP12.37□□□□□ -0.43
TPM3-207ENST00000341372 MX1P20591 662 aa12.37□□□□□ -0.43
TPM3-207ENST00000341372 ADD2P35612 726 aa12.37□□□□□ -0.43
TPM3-207ENST00000341372 PICALMQ13492 652 aa12.37□□□□□ -0.43
TPM3-207ENST00000341372 SLC9C2Q5TAH2 1124 aa12.37□□□□□ -0.43
TPM3-207ENST00000341372 ANKRD45Q5TZF3 282 aa12.37□□□□□ -0.43
TPM3-207ENST00000341372 SPRYD7Q5W111 196 aa12.37□□□□□ -0.43
TPM3-207ENST00000341372 ZNF341Q9BYN7 854 aa12.37□□□□□ -0.43
TPM3-207ENST00000341372 LNPKQ9C0E8 428 aa12.37□□□□□ -0.43
TPM3-207ENST00000341372 BCL11AQ9H165 835 aa12.37□□□□□ -0.43
TPM3-207ENST00000341372 STAP2Q9UGK3 403 aa12.37□□□□□ -0.43
TPM3-207ENST00000341372 MYH1P12882 1939 aa12.37□□□□□ -0.43
TPM3-207ENST00000341372 PPP1R3GB7ZBB8 358 aa12.37□□□□□ -0.43
TPM3-207ENST00000341372 GLRX3O76003 335 aaKnown RBP12.37□□□□□ -0.43
TPM3-207ENST00000341372 ZBTB48P10074 688 aaPredicted RBP12.37□□□□□ -0.43
TPM3-207ENST00000341372 DYNLL1P63167 89 aaKnown RBP12.37□□□□□ -0.43
TPM3-207ENST00000341372 KIF23Q02241 960 aaPredicted RBP12.37□□□□□ -0.43
TPM3-207ENST00000341372 VGLL4Q14135 290 aa12.37□□□□□ -0.43
TPM3-207ENST00000341372 TSHZ3Q63HK5 1081 aa12.37□□□□□ -0.43
TPM3-207ENST00000341372 NOL8Q76FK4 1167 aaKnown RBP12.37□□□□□ -0.43
TPM3-207ENST00000341372 FAM200AQ8TCP9 573 aa12.37□□□□□ -0.43
TPM3-207ENST00000341372 CSRNP1Q96S65 589 aa12.37□□□□□ -0.43
TPM3-207ENST00000341372 FLT1P17948 1338 aa12.37□□□□□ -0.43
TPM3-207ENST00000341372 ZNF532Q9HCE3 1301 aa12.37□□□□□ -0.43
TPM3-207ENST00000341372 DOCK1Q14185 1865 aa12.36□□□□□ -0.43
TPM3-207ENST00000341372 ERC2O15083 957 aa12.36□□□□□ -0.43
TPM3-207ENST00000341372 SKIP12755 728 aa12.36□□□□□ -0.43
TPM3-207ENST00000341372 UBE3CQ15386 1083 aa12.36□□□□□ -0.43
TPM3-207ENST00000341372 NOL9Q5SY16 702 aaKnown RBP12.36□□□□□ -0.43
TPM3-207ENST00000341372 PLEKHM2Q8IWE5 1019 aa12.36□□□□□ -0.43
TPM3-207ENST00000341372 KBTBD3Q8NAB2 608 aa12.36□□□□□ -0.43
TPM3-207ENST00000341372 WNK4Q96J92 1243 aa12.36□□□□□ -0.43
TPM3-207ENST00000341372 WRNIP1Q96S55 665 aa12.36□□□□□ -0.43
TPM3-207ENST00000341372 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms