RNA–Protein interactions for RNA: ENST00000341037.8

TNC-201, Transcript of tenascin C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TNC, Length 6,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-201ENST00000341037 CBX8Q9HC52 389 aa12.65□□□□□ -0.38
TNC-201ENST00000341037 TESPA1A2RU30 521 aaPredicted RBP12.64□□□□□ -0.39
TNC-201ENST00000341037 CTSWP56202 376 aa12.64□□□□□ -0.39
TNC-201ENST00000341037 SF3A3Q12874 501 aaKnown RBP eCLIP12.64□□□□□ -0.39
TNC-201ENST00000341037 KRT40Q6A162 431 aa12.64□□□□□ -0.39
TNC-201ENST00000341037 GLT8D2Q9H1C3 349 aa12.64□□□□□ -0.39
TNC-201ENST00000341037 ASIC3Q9UHC3 531 aa12.64□□□□□ -0.39
TNC-201ENST00000341037 TTF2Q9UNY4 1162 aaKnown RBP12.64□□□□□ -0.39
TNC-201ENST00000341037 RFX1P22670 979 aa12.64□□□□□ -0.39
TNC-201ENST00000341037 DOK7Q18PE1 504 aa12.64□□□□□ -0.39
TNC-201ENST00000341037 GADL1Q6ZQY3 521 aa12.64□□□□□ -0.39
TNC-201ENST00000341037 CCDC110Q8TBZ0 833 aa12.64□□□□□ -0.39
TNC-201ENST00000341037 E7EWF7 191 aa12.64□□□□□ -0.39
TNC-201ENST00000341037 SCNN1DP51172 638 aa12.64□□□□□ -0.39
TNC-201ENST00000341037 KBTBD3Q8NAB2 608 aa12.64□□□□□ -0.39
TNC-201ENST00000341037 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.64□□□□□ -0.39
TNC-201ENST00000341037 IBTKQ9P2D0 1353 aaPredicted RBP12.64□□□□□ -0.39
TNC-201ENST00000341037 CEP104O60308 925 aa12.64□□□□□ -0.39
TNC-201ENST00000341037 GADD45BO75293 160 aaPredicted RBP12.64□□□□□ -0.39
TNC-201ENST00000341037 TNNI1P19237 187 aa12.64□□□□□ -0.39
TNC-201ENST00000341037 HOOK2Q96ED9 719 aa12.64□□□□□ -0.39
TNC-201ENST00000341037 CARD10Q9BWT7 1032 aa12.64□□□□□ -0.39
TNC-201ENST00000341037 IGSF3O75054 1194 aa12.64□□□□□ -0.39
TNC-201ENST00000341037 ALDH1B1P30837 517 aa12.64□□□□□ -0.39
TNC-201ENST00000341037 CLCN1P35523 988 aa12.64□□□□□ -0.39
TNC-201ENST00000341037 SLC9C1Q4G0N8 1177 aa12.64□□□□□ -0.39
TNC-201ENST00000341037 RNF169Q8NCN4 708 aa12.64□□□□□ -0.39
TNC-201ENST00000341037 LSM14BQ9BX40 385 aaKnown RBP12.64□□□□□ -0.39
TNC-201ENST00000341037 U2AF2P26368 475 aaKnown RBP eCLIP12.64□□□□□ -0.39
TNC-201ENST00000341037 FAM47CQ5HY64 1035 aa12.64□□□□□ -0.39
TNC-201ENST00000341037 MIER3Q7Z3K6 550 aa12.64□□□□□ -0.39
TNC-201ENST00000341037 STMN2Q93045 179 aa12.64□□□□□ -0.39
TNC-201ENST00000341037 BEGAINQ9BUH8 593 aa12.64□□□□□ -0.39
TNC-201ENST00000341037 BCS1LQ9Y276 419 aa12.64□□□□□ -0.39
TNC-201ENST00000341037 SMCO2A6NFE2 343 aa12.63□□□□□ -0.39
TNC-201ENST00000341037 AFAP1L1Q8TED9 768 aa12.63□□□□□ -0.39
TNC-201ENST00000341037 TESK2Q96S53 571 aa12.63□□□□□ -0.39
TNC-201ENST00000341037 LPXNO60711 386 aa12.63□□□□□ -0.39
TNC-201ENST00000341037 CYP2J2P51589 502 aa12.63□□□□□ -0.39
TNC-201ENST00000341037 EPSTI1Q96J88 318 aa12.63□□□□□ -0.39
TNC-201ENST00000341037 NUP58Q9BVL2 599 aa12.63□□□□□ -0.39
TNC-201ENST00000341037 ACTN4O43707 911 aaKnown RBP12.63□□□□□ -0.39
TNC-201ENST00000341037 SFMBT2Q5VUG0 894 aa12.63□□□□□ -0.39
TNC-201ENST00000341037 TYW1BQ6NUM6 668 aa12.63□□□□□ -0.39
TNC-201ENST00000341037 NSMCE1Q8WV22 266 aa12.63□□□□□ -0.39
TNC-201ENST00000341037 GLG1Q92896 1179 aa12.63□□□□□ -0.39
TNC-201ENST00000341037 EDC3Q96F86 508 aaKnown RBP12.63□□□□□ -0.39
TNC-201ENST00000341037 LZTS2Q9BRK4 669 aa12.63□□□□□ -0.39
TNC-201ENST00000341037 TUBB4BP68371 445 aa12.63□□□□□ -0.39
TNC-201ENST00000341037 MTX1Q13505 466 aa12.63□□□□□ -0.39
TNC-201ENST00000341037 GKAP1Q5VSY0 366 aaPredicted RBP12.63□□□□□ -0.39
TNC-201ENST00000341037 TRPC6Q9Y210 931 aa12.63□□□□□ -0.39
TNC-201ENST00000341037 BCRP11274 1271 aa12.63□□□□□ -0.39
TNC-201ENST00000341037 LRRC47Q8N1G4 583 aaKnown RBP12.63□□□□□ -0.39
TNC-201ENST00000341037 MKRN1Q9UHC7 482 aaKnown RBP12.63□□□□□ -0.39
TNC-201ENST00000341037 AOX1Q06278 1338 aa12.63□□□□□ -0.39
TNC-201ENST00000341037 CFAP65Q6ZU64 1925 aaKnown RBP12.62□□□□□ -0.39
TNC-201ENST00000341037 BSPRYQ5W0U4 402 aa12.62□□□□□ -0.39
TNC-201ENST00000341037 CCDC125Q86Z20 511 aa12.62□□□□□ -0.39
TNC-201ENST00000341037 RPUSD2Q8IZ73 545 aaKnown RBP12.62□□□□□ -0.39
TNC-201ENST00000341037 C17orf53Q8N3J3 647 aaPredicted RBP12.62□□□□□ -0.39
TNC-201ENST00000341037 SGSM2O43147 1006 aa12.62□□□□□ -0.39
TNC-201ENST00000341037 GAS7O60861 476 aa12.62□□□□□ -0.39
TNC-201ENST00000341037 KLHL30Q0D2K2 578 aa12.62□□□□□ -0.39
TNC-201ENST00000341037 IFRD2Q12894 506 aaPredicted RBP12.62□□□□□ -0.39
TNC-201ENST00000341037 CERS3Q8IU89 383 aa12.62□□□□□ -0.39
TNC-201ENST00000341037 STIM2Q9P246 746 aa12.62□□□□□ -0.39
TNC-201ENST00000341037 TRIM35Q9UPQ4 493 aa12.62□□□□□ -0.39
TNC-201ENST00000341037 CFAP43Q8NDM7 1665 aa12.62□□□□□ -0.39
TNC-201ENST00000341037 ZNF75DP51815 510 aa12.62□□□□□ -0.39
TNC-201ENST00000341037 ZNF131P52739 623 aa12.62□□□□□ -0.39
TNC-201ENST00000341037 BIRC2Q13490 618 aa12.62□□□□□ -0.39
TNC-201ENST00000341037 MFSD14BQ5SR56 506 aa12.62□□□□□ -0.39
TNC-201ENST00000341037 CEP128Q6ZU80 1094 aa12.62□□□□□ -0.39
TNC-201ENST00000341037 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.62□□□□□ -0.39
TNC-201ENST00000341037 ARFGAP2Q8N6H7 521 aa12.62□□□□□ -0.39
TNC-201ENST00000341037 MLXIPQ9HAP2 919 aa12.62□□□□□ -0.39
TNC-201ENST00000341037 SERTAD1Q9UHV2 236 aa12.62□□□□□ -0.39
TNC-201ENST00000341037 ZMYM4Q5VZL5 1548 aa12.62□□□□□ -0.39
TNC-201ENST00000341037 EP400NLQ6ZTU2 488 aa12.62□□□□□ -0.39
TNC-201ENST00000341037 RIOK1Q9BRS2 568 aaKnown RBP12.62□□□□□ -0.39
TNC-201ENST00000341037 ABL1P00519 1130 aa12.62□□□□□ -0.39
TNC-201ENST00000341037 TECP42680 631 aa12.62□□□□□ -0.39
TNC-201ENST00000341037 GYG1P46976 350 aa12.62□□□□□ -0.39
TNC-201ENST00000341037 TTC31Q49AM3 519 aaPredicted RBP12.62□□□□□ -0.39
TNC-201ENST00000341037 NLRX1Q86UT6 975 aa12.62□□□□□ -0.39
TNC-201ENST00000341037 DEPTORQ8TB45 409 aa12.62□□□□□ -0.39
TNC-201ENST00000341037 SDR42E1Q8WUS8 393 aa12.62□□□□□ -0.39
TNC-201ENST00000341037 NEURL1BA8MQ27 555 aa12.61□□□□□ -0.39
TNC-201ENST00000341037 H7C1D1 291 aa12.61□□□□□ -0.39
TNC-201ENST00000341037 CNGA1P29973 690 aa12.61□□□□□ -0.39
TNC-201ENST00000341037 LACTBP83111 547 aaPredicted RBP12.61□□□□□ -0.39
TNC-201ENST00000341037 GPBP1Q86WP2 473 aa12.61□□□□□ -0.39
TNC-201ENST00000341037 IFT20Q8IY31 132 aa12.61□□□□□ -0.39
TNC-201ENST00000341037 CCDC89Q8N998 374 aa12.61□□□□□ -0.39
TNC-201ENST00000341037 ARPP21Q9UBL0 812 aaPredicted RBP12.61□□□□□ -0.39
TNC-201ENST00000341037 FAM184BQ9ULE4 1060 aa12.61□□□□□ -0.39
TNC-201ENST00000341037 MAN1A1P33908 653 aa12.61□□□□□ -0.39
TNC-201ENST00000341037 REXO1Q8N1G1 1221 aaKnown RBP12.61□□□□□ -0.39
TNC-201ENST00000341037 SLF1Q9BQI6 1058 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms