RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 NEUROG2Q9H2A3 272 aa15.28■□□□□ 0.04
PDE4D-203ENST00000340635 SART1O43290 800 aaKnown RBP15.28■□□□□ 0.04
PDE4D-203ENST00000340635 PRPSAP1Q14558 356 aa15.28■□□□□ 0.04
PDE4D-203ENST00000340635 CHST3Q7LGC8 479 aa15.28■□□□□ 0.04
PDE4D-203ENST00000340635 SPATS2Q86XZ4 545 aaKnown RBP15.28■□□□□ 0.04
PDE4D-203ENST00000340635 MRPL44Q9H9J2 332 aaKnown RBP15.28■□□□□ 0.04
PDE4D-203ENST00000340635 OCM2P0CE71 109 aa15.28■□□□□ 0.04
PDE4D-203ENST00000340635 OCMP0CE72 109 aaPredicted RBP15.28■□□□□ 0.04
PDE4D-203ENST00000340635 EEF1B2P24534 225 aaKnown RBP15.28■□□□□ 0.04
PDE4D-203ENST00000340635 PRPF38AQ8NAV1 312 aaKnown RBP15.28■□□□□ 0.04
PDE4D-203ENST00000340635 PSMB7Q99436 277 aa15.28■□□□□ 0.04
PDE4D-203ENST00000340635 NUDCD3Q8IVD9 361 aa15.27■□□□□ 0.04
PDE4D-203ENST00000340635 CSGALNACT2Q8N6G5 542 aa15.27■□□□□ 0.04
PDE4D-203ENST00000340635 PARP3Q9Y6F1 533 aa15.27■□□□□ 0.04
PDE4D-203ENST00000340635 MYCT1Q8N699 235 aa15.27■□□□□ 0.04
PDE4D-203ENST00000340635 ZNF408Q9H9D4 720 aa15.27■□□□□ 0.04
PDE4D-203ENST00000340635 GTPBP10A4D1E9 387 aaKnown RBP15.27■□□□□ 0.04
PDE4D-203ENST00000340635 LRRD1A4D1F6 860 aa15.27■□□□□ 0.04
PDE4D-203ENST00000340635 PI4KAP2A4QPH2 592 aa15.27■□□□□ 0.04
PDE4D-203ENST00000340635 PRIM1P49642 420 aaKnown RBP15.27■□□□□ 0.04
PDE4D-203ENST00000340635 ASPHQ12797 758 aa15.27■□□□□ 0.04
PDE4D-203ENST00000340635 SLC12A1Q13621 1099 aa15.27■□□□□ 0.04
PDE4D-203ENST00000340635 RAPH1Q70E73 1250 aa15.27■□□□□ 0.04
PDE4D-203ENST00000340635 IFNL2Q8IZJ0 200 aa15.27■□□□□ 0.04
PDE4D-203ENST00000340635 PI4KAP1Q8N8J0 262 aa15.27■□□□□ 0.04
PDE4D-203ENST00000340635 RAB20Q9NX57 234 aa15.27■□□□□ 0.04
PDE4D-203ENST00000340635 RIMBP2O15034 1052 aa15.27■□□□□ 0.03
PDE4D-203ENST00000340635 HSPA8P11142 646 aaKnown RBP15.27■□□□□ 0.03
PDE4D-203ENST00000340635 LONRF2Q1L5Z9 754 aa15.27■□□□□ 0.03
PDE4D-203ENST00000340635 SCYL2Q6P3W7 929 aa15.27■□□□□ 0.03
PDE4D-203ENST00000340635 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.27■□□□□ 0.03
PDE4D-203ENST00000340635 MIGA1Q8NAN2 632 aa15.27■□□□□ 0.03
PDE4D-203ENST00000340635 GJA3Q9Y6H8 435 aa15.27■□□□□ 0.03
PDE4D-203ENST00000340635 TYW5A2RUC4 315 aaKnown RBP15.27■□□□□ 0.03
PDE4D-203ENST00000340635 ANKRD13DQ6ZTN6 518 aa15.27■□□□□ 0.03
PDE4D-203ENST00000340635 ABTB1Q969K4 478 aaPredicted RBP15.27■□□□□ 0.03
PDE4D-203ENST00000340635 SCINQ9Y6U3 715 aa15.27■□□□□ 0.03
PDE4D-203ENST00000340635 TMED1Q13445 227 aa15.26■□□□□ 0.03
PDE4D-203ENST00000340635 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.26■□□□□ 0.03
PDE4D-203ENST00000340635 TNNI1P19237 187 aa15.26■□□□□ 0.03
PDE4D-203ENST00000340635 IFRD2Q12894 506 aaPredicted RBP15.26■□□□□ 0.03
PDE4D-203ENST00000340635 PAWRQ96IZ0 340 aaKnown RBP15.26■□□□□ 0.03
PDE4D-203ENST00000340635 NBPF3Q9H094 633 aa15.26■□□□□ 0.03
PDE4D-203ENST00000340635 WWC3Q9ULE0 1092 aa15.26■□□□□ 0.03
PDE4D-203ENST00000340635 IFNB1P01574 187 aa15.26■□□□□ 0.03
PDE4D-203ENST00000340635 ARHGDIAP52565 204 aa15.26■□□□□ 0.03
PDE4D-203ENST00000340635 NCAPH2Q6IBW4 605 aa15.26■□□□□ 0.03
PDE4D-203ENST00000340635 RPAINQ86UA6 219 aa15.26■□□□□ 0.03
PDE4D-203ENST00000340635 KLHDC4Q8TBB5 520 aa15.26■□□□□ 0.03
PDE4D-203ENST00000340635 KIF9Q9HAQ2 790 aa15.26■□□□□ 0.03
PDE4D-203ENST00000340635 CTNNA1P35221 906 aaKnown RBP15.26■□□□□ 0.03
PDE4D-203ENST00000340635 ATP6V1E2Q96A05 226 aa15.26■□□□□ 0.03
PDE4D-203ENST00000340635 CSRNP1Q96S65 589 aa15.26■□□□□ 0.03
PDE4D-203ENST00000340635 CAPN7Q9Y6W3 813 aa15.26■□□□□ 0.03
PDE4D-203ENST00000340635 SERPINI2O75830 405 aa15.26■□□□□ 0.03
PDE4D-203ENST00000340635 EYA3Q99504 573 aa15.26■□□□□ 0.03
PDE4D-203ENST00000340635 FAM95CA0A1B0GW59 222 aa15.26■□□□□ 0.03
PDE4D-203ENST00000340635 NUCB1Q02818 461 aa15.26■□□□□ 0.03
PDE4D-203ENST00000340635 MYLK4Q86YV6 388 aaPredicted RBP15.26■□□□□ 0.03
PDE4D-203ENST00000340635 RPGRIP1Q96KN7 1286 aa15.26■□□□□ 0.03
PDE4D-203ENST00000340635 SPATS2LQ9NUQ6 558 aaKnown RBP15.26■□□□□ 0.03
PDE4D-203ENST00000340635 C11orf95C9JLR9 678 aaPredicted RBP15.26■□□□□ 0.03
PDE4D-203ENST00000340635 ARHGAP6O43182 974 aa15.26■□□□□ 0.03
PDE4D-203ENST00000340635 ACRBPQ8NEB7 543 aa15.26■□□□□ 0.03
PDE4D-203ENST00000340635 HOMER3Q9NSC5 361 aa15.26■□□□□ 0.03
PDE4D-203ENST00000340635 DAPK1P53355 1430 aa15.25■□□□□ 0.03
PDE4D-203ENST00000340635 RLBP1P12271 317 aa15.25■□□□□ 0.03
PDE4D-203ENST00000340635 STX1BP61266 288 aa15.25■□□□□ 0.03
PDE4D-203ENST00000340635 HELLSQ9NRZ9 838 aa15.25■□□□□ 0.03
PDE4D-203ENST00000340635 CCPG1Q9ULG6 757 aa15.25■□□□□ 0.03
PDE4D-203ENST00000340635 MAD1L1Q9Y6D9 718 aa15.25■□□□□ 0.03
PDE4D-203ENST00000340635 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.25■□□□□ 0.03
PDE4D-203ENST00000340635 ADCY8P40145 1251 aa15.25■□□□□ 0.03
PDE4D-203ENST00000340635 APOBRQ0VD83 1088 aa15.25■□□□□ 0.03
PDE4D-203ENST00000340635 NME8Q8N427 588 aa15.25■□□□□ 0.03
PDE4D-203ENST00000340635 TRIM55Q9BYV6 548 aa15.25■□□□□ 0.03
PDE4D-203ENST00000340635 DDX41Q9UJV9 622 aaKnown RBP15.25■□□□□ 0.03
PDE4D-203ENST00000340635 EVI5O60447 810 aa15.25■□□□□ 0.03
PDE4D-203ENST00000340635 GPC4O75487 556 aa15.25■□□□□ 0.03
PDE4D-203ENST00000340635 BLVRAP53004 296 aa15.25■□□□□ 0.03
PDE4D-203ENST00000340635 TRIM60Q495X7 471 aa15.25■□□□□ 0.03
PDE4D-203ENST00000340635 SFMBT2Q5VUG0 894 aa15.25■□□□□ 0.03
PDE4D-203ENST00000340635 PGBD1Q96JS3 809 aa15.25■□□□□ 0.03
PDE4D-203ENST00000340635 HEXIM1O94992 359 aaKnown RBP15.25■□□□□ 0.03
PDE4D-203ENST00000340635 EXOC3O60645 756 aa15.25■□□□□ 0.03
PDE4D-203ENST00000340635 NIP7Q9Y221 180 aaKnown RBP eCLIP15.25■□□□□ 0.03
PDE4D-203ENST00000340635 THAP12O43422 761 aa15.25■□□□□ 0.03
PDE4D-203ENST00000340635 LONP1P36776 959 aaKnown RBP15.25■□□□□ 0.03
PDE4D-203ENST00000340635 PAK1Q13153 545 aa15.25■□□□□ 0.03
PDE4D-203ENST00000340635 UBN1Q9NPG3 1134 aa15.25■□□□□ 0.03
PDE4D-203ENST00000340635 ZSCAN32Q9NX65 697 aa15.25■□□□□ 0.03
PDE4D-203ENST00000340635 SAP30BPQ9UHR5 308 aaKnown RBP15.25■□□□□ 0.03
PDE4D-203ENST00000340635 AMFRQ9UKV5 643 aa15.25■□□□□ 0.03
PDE4D-203ENST00000340635 MAPK8IP1Q9UQF2 711 aa15.25■□□□□ 0.03
PDE4D-203ENST00000340635 MAN1A2O60476 641 aa15.24■□□□□ 0.03
PDE4D-203ENST00000340635 RXRAP19793 462 aa15.24■□□□□ 0.03
PDE4D-203ENST00000340635 CWF19L2Q2TBE0 894 aaKnown RBP15.24■□□□□ 0.03
PDE4D-203ENST00000340635 FAM193BQ96PV7 902 aaPredicted RBP15.24■□□□□ 0.03
PDE4D-203ENST00000340635 CCDC141Q6ZP82 1450 aa15.24■□□□□ 0.03
PDE4D-203ENST00000340635 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms