RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 ANKRD1Q15327 319 aa17.37■□□□□ 0.37
BRAT1-201ENST00000340611 ZNF215Q9UL58 517 aaPredicted RBP17.37■□□□□ 0.37
BRAT1-201ENST00000340611 USP17L3A6NCW0 530 aa17.36■□□□□ 0.37
BRAT1-201ENST00000340611 USP17L4A6NCW7 530 aa17.36■□□□□ 0.37
BRAT1-201ENST00000340611 LDHCP07864 332 aa17.36■□□□□ 0.37
BRAT1-201ENST00000340611 PDIA3P30101 505 aaKnown RBP17.36■□□□□ 0.37
BRAT1-201ENST00000340611 SART3Q15020 963 aaKnown RBP17.36■□□□□ 0.37
BRAT1-201ENST00000340611 USP17L1Q7RTZ2 530 aa17.36■□□□□ 0.37
BRAT1-201ENST00000340611 FAM200AQ8TCP9 573 aa17.36■□□□□ 0.37
BRAT1-201ENST00000340611 DDX4Q9NQI0 724 aaKnown RBP17.36■□□□□ 0.37
BRAT1-201ENST00000340611 SCAF8Q9UPN6 1271 aaKnown RBP17.36■□□□□ 0.37
BRAT1-201ENST00000340611 TYRO3Q06418 890 aa17.36■□□□□ 0.37
BRAT1-201ENST00000340611 TPD52L1Q16890 204 aaPredicted RBP17.36■□□□□ 0.37
BRAT1-201ENST00000340611 STAG1Q8WVM7 1258 aa17.36■□□□□ 0.37
BRAT1-201ENST00000340611 ZSCAN31Q96LW9 406 aaPredicted RBP17.36■□□□□ 0.37
BRAT1-201ENST00000340611 MKRN1Q9UHC7 482 aaKnown RBP17.36■□□□□ 0.37
BRAT1-201ENST00000340611 MRVI1Q9Y6F6 885 aa17.36■□□□□ 0.37
BRAT1-201ENST00000340611 IFIT3O14879 490 aaKnown RBP17.35■□□□□ 0.37
BRAT1-201ENST00000340611 TPM3P06753 285 aa17.35■□□□□ 0.37
BRAT1-201ENST00000340611 NFIAQ12857 509 aa17.35■□□□□ 0.37
BRAT1-201ENST00000340611 TMEM67Q5HYA8 995 aa17.35■□□□□ 0.37
BRAT1-201ENST00000340611 CT47A1Q5JQC4 288 aaPredicted RBP17.35■□□□□ 0.37
BRAT1-201ENST00000340611 RTKN2Q8IZC4 609 aa17.35■□□□□ 0.37
BRAT1-201ENST00000340611 NUP62CLQ9H1M0 184 aa17.35■□□□□ 0.37
BRAT1-201ENST00000340611 SH2B1Q9NRF2 756 aaPredicted RBP17.35■□□□□ 0.37
BRAT1-201ENST00000340611 ZNF446Q9NWS9 450 aa17.35■□□□□ 0.37
BRAT1-201ENST00000340611 SHTN1A0MZ66 631 aa17.35■□□□□ 0.37
BRAT1-201ENST00000340611 GOLGA8BA8MQT2 603 aa17.35■□□□□ 0.37
BRAT1-201ENST00000340611 PSMD14O00487 310 aa17.35■□□□□ 0.37
BRAT1-201ENST00000340611 TCP10Q12799 353 aa17.35■□□□□ 0.37
BRAT1-201ENST00000340611 MAP3K11Q16584 847 aa17.35■□□□□ 0.37
BRAT1-201ENST00000340611 MICU3Q86XE3 530 aa17.35■□□□□ 0.37
BRAT1-201ENST00000340611 ZFPM1Q8IX07 1006 aa17.35■□□□□ 0.37
BRAT1-201ENST00000340611 ATP8A2Q9NTI2 1148 aa17.35■□□□□ 0.37
BRAT1-201ENST00000340611 USP40Q9NVE5 1235 aa17.35■□□□□ 0.37
BRAT1-201ENST00000340611 NFKBIEO00221 500 aa17.34■□□□□ 0.37
BRAT1-201ENST00000340611 CRKP46108 304 aa17.34■□□□□ 0.37
BRAT1-201ENST00000340611 STRIP1Q5VSL9 837 aa17.34■□□□□ 0.37
BRAT1-201ENST00000340611 IGDCC4Q8TDY8 1250 aa17.34■□□□□ 0.37
BRAT1-201ENST00000340611 AGXT2Q9BYV1 514 aa17.34■□□□□ 0.37
BRAT1-201ENST00000340611 ZMYM6O95789 1325 aa17.34■□□□□ 0.37
BRAT1-201ENST00000340611 GAKO14976 1311 aa17.34■□□□□ 0.37
BRAT1-201ENST00000340611 CTDNEP1O95476 244 aa17.34■□□□□ 0.37
BRAT1-201ENST00000340611 POLR3DP05423 398 aaPredicted RBP17.34■□□□□ 0.37
BRAT1-201ENST00000340611 FLT1P17948 1338 aa17.34■□□□□ 0.37
BRAT1-201ENST00000340611 PRELPP51888 382 aa17.34■□□□□ 0.37
BRAT1-201ENST00000340611 PPP4CP60510 307 aa17.34■□□□□ 0.37
BRAT1-201ENST00000340611 ANO6Q4KMQ2 910 aa17.34■□□□□ 0.37
BRAT1-201ENST00000340611 ICE2Q659A1 982 aa17.34■□□□□ 0.37
BRAT1-201ENST00000340611 NFXL1Q6ZNB6 911 aa17.34■□□□□ 0.37
BRAT1-201ENST00000340611 CDC37L1Q7L3B6 337 aa17.34■□□□□ 0.37
BRAT1-201ENST00000340611 MYCBPQ99417 103 aaPredicted RBP17.34■□□□□ 0.37
BRAT1-201ENST00000340611 ALDH8A1Q9H2A2 487 aaPredicted RBP17.34■□□□□ 0.37
BRAT1-201ENST00000340611 TFIP11Q9UBB9 837 aaKnown RBP17.34■□□□□ 0.37
BRAT1-201ENST00000340611 MYO1CO00159 1063 aa17.34■□□□□ 0.37
BRAT1-201ENST00000340611 SH2B2O14492 632 aaPredicted RBP17.34■□□□□ 0.37
BRAT1-201ENST00000340611 CC2D2BQ6DHV5 1058 aa17.34■□□□□ 0.37
BRAT1-201ENST00000340611 APOBEC3HQ6NTF7 200 aaKnown RBP17.34■□□□□ 0.37
BRAT1-201ENST00000340611 CMTR1Q8N1G2 835 aaKnown RBP17.34■□□□□ 0.37
BRAT1-201ENST00000340611 TRIM5Q9C035 493 aa17.34■□□□□ 0.37
BRAT1-201ENST00000340611 CBX8Q9HC52 389 aa17.34■□□□□ 0.37
BRAT1-201ENST00000340611 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.34■□□□□ 0.37
BRAT1-201ENST00000340611 HPS5Q9UPZ3 1129 aa17.34■□□□□ 0.37
BRAT1-201ENST00000340611 BRCA1P38398 1863 aaKnown RBP17.33■□□□□ 0.37
BRAT1-201ENST00000340611 UBE2Q2LH0YL09 131 aa17.33■□□□□ 0.37
BRAT1-201ENST00000340611 LARP1BQ659C4 914 aaKnown RBP17.33■□□□□ 0.37
BRAT1-201ENST00000340611 CDC42EP5Q6NZY7 148 aa17.33■□□□□ 0.37
BRAT1-201ENST00000340611 LY9Q9HBG7 655 aa17.33■□□□□ 0.37
BRAT1-201ENST00000340611 DACT1Q9NYF0 836 aa17.33■□□□□ 0.37
BRAT1-201ENST00000340611 ANGEL1Q9UNK9 670 aaKnown RBP17.33■□□□□ 0.37
BRAT1-201ENST00000340611 BAZ2BQ9UIF8 2168 aaKnown RBP17.33■□□□□ 0.36
BRAT1-201ENST00000340611 CCDC82Q8N4S0 544 aa17.33■□□□□ 0.36
BRAT1-201ENST00000340611 TEKT1Q969V4 418 aa17.33■□□□□ 0.36
BRAT1-201ENST00000340611 ADD1P35611 737 aaKnown RBP17.32■□□□□ 0.36
BRAT1-201ENST00000340611 C12orf60Q5U649 245 aa17.32■□□□□ 0.36
BRAT1-201ENST00000340611 SUPT20HQ8NEM7 779 aa17.32■□□□□ 0.36
BRAT1-201ENST00000340611 PSMD1Q99460 953 aa17.32■□□□□ 0.36
BRAT1-201ENST00000340611 FHDC1Q9C0D6 1143 aaPredicted RBP17.32■□□□□ 0.36
BRAT1-201ENST00000340611 GJB4Q9NTQ9 266 aa17.32■□□□□ 0.36
BRAT1-201ENST00000340611 MTMR7Q9Y216 660 aa17.32■□□□□ 0.36
BRAT1-201ENST00000340611 ZNF646O15015 1829 aaPredicted RBP17.32■□□□□ 0.36
BRAT1-201ENST00000340611 FAM196BA6NMK8 535 aa17.32■□□□□ 0.36
BRAT1-201ENST00000340611 WDHD1O75717 1129 aaPredicted RBP17.32■□□□□ 0.36
BRAT1-201ENST00000340611 TNMDQ9H2S6 317 aa17.32■□□□□ 0.36
BRAT1-201ENST00000340611 NAV1Q8NEY1 1877 aa17.32■□□□□ 0.36
BRAT1-201ENST00000340611 MYH1P12882 1939 aa17.31■□□□□ 0.36
BRAT1-201ENST00000340611 PFKFB2O60825 505 aa17.31■□□□□ 0.36
BRAT1-201ENST00000340611 IARSP41252 1262 aaKnown RBP17.31■□□□□ 0.36
BRAT1-201ENST00000340611 KRT85P78386 507 aa17.31■□□□□ 0.36
BRAT1-201ENST00000340611 SYCP1Q15431 976 aa17.31■□□□□ 0.36
BRAT1-201ENST00000340611 KRT23Q9C075 422 aa17.31■□□□□ 0.36
BRAT1-201ENST00000340611 TAOK3Q9H2K8 898 aa17.31■□□□□ 0.36
BRAT1-201ENST00000340611 TDRD3Q9H7E2 651 aaKnown RBP17.31■□□□□ 0.36
BRAT1-201ENST00000340611 GUCY1B3Q02153 619 aa17.31■□□□□ 0.36
BRAT1-201ENST00000340611 FAM163AQ96GL9 167 aaPredicted RBP17.31■□□□□ 0.36
BRAT1-201ENST00000340611 ANAPC4Q9UJX5 808 aa17.31■□□□□ 0.36
BRAT1-201ENST00000340611 TIAM2Q8IVF5 1701 aa17.31■□□□□ 0.36
BRAT1-201ENST00000340611 TNKSO95271 1327 aa17.31■□□□□ 0.36
BRAT1-201ENST00000340611 GOLGA6L4A6NEF3 574 aa17.31■□□□□ 0.36
BRAT1-201ENST00000340611 CDC27P30260 824 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms