RNA–Protein interactions for RNA: ENST00000340578.10

RANBP3-202, Transcript of RAN binding protein 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RANBP3, Length 3,233 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-202ENST00000340578 COL4A1P02462 1669 aa13.01□□□□□ -0.33
RANBP3-202ENST00000340578 MYH14Q7Z406 1995 aaKnown RBP13.01□□□□□ -0.33
RANBP3-202ENST00000340578 AFF2P51816 1311 aa13□□□□□ -0.33
RANBP3-202ENST00000340578 IKBKBO14920 756 aa13□□□□□ -0.33
RANBP3-202ENST00000340578 PLEKHA8P1O95397 391 aa13□□□□□ -0.33
RANBP3-202ENST00000340578 UBASH3AP57075 661 aa13□□□□□ -0.33
RANBP3-202ENST00000340578 EVX2Q03828 476 aa13□□□□□ -0.33
RANBP3-202ENST00000340578 PTPN21Q16825 1174 aa13□□□□□ -0.33
RANBP3-202ENST00000340578 ZNF384Q8TF68 577 aa13□□□□□ -0.33
RANBP3-202ENST00000340578 SERTAD1Q9UHV2 236 aa13□□□□□ -0.33
RANBP3-202ENST00000340578 ANAPC4Q9UJX5 808 aa13□□□□□ -0.33
RANBP3-202ENST00000340578 DDX60Q8IY21 1712 aaKnown RBP13□□□□□ -0.33
RANBP3-202ENST00000340578 COL1A1P02452 1464 aaPredicted RBP13□□□□□ -0.33
RANBP3-202ENST00000340578 FAM205CA6NFA0 338 aa13□□□□□ -0.33
RANBP3-202ENST00000340578 ZPR1O75312 459 aa13□□□□□ -0.33
RANBP3-202ENST00000340578 PTPREP23469 700 aa13□□□□□ -0.33
RANBP3-202ENST00000340578 MECOMQ03112 1051 aa13□□□□□ -0.33
RANBP3-202ENST00000340578 CTR9Q6PD62 1173 aa13□□□□□ -0.33
RANBP3-202ENST00000340578 GRAMD1CQ8IYS0 662 aa13□□□□□ -0.33
RANBP3-202ENST00000340578 OSBPL5Q9H0X9 879 aaPredicted RBP13□□□□□ -0.33
RANBP3-202ENST00000340578 FBXO2Q9UK22 296 aaPredicted RBP13□□□□□ -0.33
RANBP3-202ENST00000340578 PAXBP1Q9Y5B6 917 aa13□□□□□ -0.33
RANBP3-202ENST00000340578 FAM237AA0A1B0GTK4 181 aa13□□□□□ -0.33
RANBP3-202ENST00000340578 HIBADHP31937 336 aaKnown RBP13□□□□□ -0.33
RANBP3-202ENST00000340578 FAM47AQ5JRC9 791 aa13□□□□□ -0.33
RANBP3-202ENST00000340578 ARMCX5Q6P1M9 558 aa13□□□□□ -0.33
RANBP3-202ENST00000340578 RNF26Q9BY78 433 aaPredicted RBP13□□□□□ -0.33
RANBP3-202ENST00000340578 CEP131Q9UPN4 1083 aa13□□□□□ -0.33
RANBP3-202ENST00000340578 GNPATO15228 680 aa12.99□□□□□ -0.33
RANBP3-202ENST00000340578 PRDX5P30044 214 aa12.99□□□□□ -0.33
RANBP3-202ENST00000340578 POSTNQ15063 836 aa12.99□□□□□ -0.33
RANBP3-202ENST00000340578 FAM182BQ5T319 152 aa12.99□□□□□ -0.33
RANBP3-202ENST00000340578 BRIP1Q9BX63 1249 aa12.99□□□□□ -0.33
RANBP3-202ENST00000340578 FANCLQ9NW38 375 aa12.99□□□□□ -0.33
RANBP3-202ENST00000340578 BCL9LQ86UU0 1499 aa12.99□□□□□ -0.33
RANBP3-202ENST00000340578 ARAP2Q8WZ64 1704 aa12.99□□□□□ -0.33
RANBP3-202ENST00000340578 NID2Q14112 1375 aa12.99□□□□□ -0.33
RANBP3-202ENST00000340578 AHDC1Q5TGY3 1603 aaPredicted RBP12.99□□□□□ -0.33
RANBP3-202ENST00000340578 NRDCO43847 1150 aa12.99□□□□□ -0.33
RANBP3-202ENST00000340578 NMT2O60551 498 aa12.99□□□□□ -0.33
RANBP3-202ENST00000340578 ZNF827Q17R98 1081 aa12.99□□□□□ -0.33
RANBP3-202ENST00000340578 USP49Q70CQ1 688 aa12.99□□□□□ -0.33
RANBP3-202ENST00000340578 CCAR2Q8N163 923 aaKnown RBP12.99□□□□□ -0.33
RANBP3-202ENST00000340578 CCDC150Q8NCX0 1101 aa12.99□□□□□ -0.33
RANBP3-202ENST00000340578 DPF2Q92785 391 aa12.99□□□□□ -0.33
RANBP3-202ENST00000340578 NSUN4Q96CB9 384 aaKnown RBP12.99□□□□□ -0.33
RANBP3-202ENST00000340578 SPATA31A6Q5VVP1 1343 aa12.98□□□□□ -0.33
RANBP3-202ENST00000340578 RCAN1P53805 252 aa12.98□□□□□ -0.33
RANBP3-202ENST00000340578 CSRNP2Q9H175 543 aa12.98□□□□□ -0.33
RANBP3-202ENST00000340578 HSD3B7Q9H2F3 369 aa12.98□□□□□ -0.33
RANBP3-202ENST00000340578 CCDC172P0C7W6 258 aa12.98□□□□□ -0.33
RANBP3-202ENST00000340578 KRT2P35908 639 aa12.98□□□□□ -0.33
RANBP3-202ENST00000340578 PDE4BQ07343 736 aa12.98□□□□□ -0.33
RANBP3-202ENST00000340578 FBXO33Q7Z6M2 555 aa12.98□□□□□ -0.33
RANBP3-202ENST00000340578 CRNKL1Q9BZJ0 848 aaKnown RBP12.98□□□□□ -0.33
RANBP3-202ENST00000340578 NYXQ9GZU5 481 aa12.98□□□□□ -0.33
RANBP3-202ENST00000340578 TRIM75PA6NK02 468 aa12.98□□□□□ -0.33
RANBP3-202ENST00000340578 BMP6P22004 513 aa12.98□□□□□ -0.33
RANBP3-202ENST00000340578 PKN1Q16512 942 aa12.98□□□□□ -0.33
RANBP3-202ENST00000340578 SMARCE1Q969G3 411 aa12.98□□□□□ -0.33
RANBP3-202ENST00000340578 SRPRBQ9Y5M8 271 aaKnown RBP12.98□□□□□ -0.33
RANBP3-202ENST00000340578 EP400Q96L91 3159 aa12.97□□□□□ -0.33
RANBP3-202ENST00000340578 COL22A1Q8NFW1 1626 aaPredicted RBP12.97□□□□□ -0.33
RANBP3-202ENST00000340578 CBFA2T2O43439 604 aa12.97□□□□□ -0.33
RANBP3-202ENST00000340578 CYP2D6P10635 497 aa12.97□□□□□ -0.33
RANBP3-202ENST00000340578 PPP2R5BQ15173 497 aa12.97□□□□□ -0.33
RANBP3-202ENST00000340578 EARS2Q5JPH6 523 aaKnown RBP12.97□□□□□ -0.33
RANBP3-202ENST00000340578 TPTE2Q6XPS3 522 aa12.97□□□□□ -0.33
RANBP3-202ENST00000340578 PDCL2Q8N4E4 241 aa12.97□□□□□ -0.33
RANBP3-202ENST00000340578 SHISA4Q96DD7 197 aa12.97□□□□□ -0.33
RANBP3-202ENST00000340578 MAN1B1Q9UKM7 699 aa12.97□□□□□ -0.33
RANBP3-202ENST00000340578 DOCK2Q92608 1830 aa12.97□□□□□ -0.33
RANBP3-202ENST00000340578 MDM2Q00987 491 aaPredicted RBP12.97□□□□□ -0.33
RANBP3-202ENST00000340578 NAA30Q147X3 362 aaPredicted RBP12.97□□□□□ -0.33
RANBP3-202ENST00000340578 CTCFLQ8NI51 663 aaPredicted RBP12.97□□□□□ -0.33
RANBP3-202ENST00000340578 DHX58Q96C10 678 aa12.97□□□□□ -0.33
RANBP3-202ENST00000340578 BRMS1Q9HCU9 246 aa12.97□□□□□ -0.33
RANBP3-202ENST00000340578 DCP1AQ9NPI6 582 aaPredicted RBP12.97□□□□□ -0.33
RANBP3-202ENST00000340578 NARFQ9UHQ1 456 aa12.97□□□□□ -0.33
RANBP3-202ENST00000340578 TSPY2A6NKD2 308 aa12.96□□□□□ -0.33
RANBP3-202ENST00000340578 CTIFO43310 598 aaKnown RBP12.96□□□□□ -0.33
RANBP3-202ENST00000340578 TROAPQ12815 778 aa12.96□□□□□ -0.33
RANBP3-202ENST00000340578 SLC10A5Q5PT55 438 aa12.96□□□□□ -0.33
RANBP3-202ENST00000340578 TXNRD3Q86VQ6 643 aa12.96□□□□□ -0.33
RANBP3-202ENST00000340578 TRMT44Q8IYL2 757 aaKnown RBP12.96□□□□□ -0.33
RANBP3-202ENST00000340578 QTRT2Q9H974 415 aaKnown RBP12.96□□□□□ -0.33
RANBP3-202ENST00000340578 RBM28Q9NW13 759 aaKnown RBP12.96□□□□□ -0.33
RANBP3-202ENST00000340578 CALCOCO1Q9P1Z2 691 aa12.96□□□□□ -0.33
RANBP3-202ENST00000340578 TIAM2Q8IVF5 1701 aa12.96□□□□□ -0.33
RANBP3-202ENST00000340578 PRPF3O43395 683 aaKnown RBP12.96□□□□□ -0.33
RANBP3-202ENST00000340578 AFMP43652 599 aa12.96□□□□□ -0.33
RANBP3-202ENST00000340578 GOLGA8FQ08AF8 430 aa12.96□□□□□ -0.33
RANBP3-202ENST00000340578 GOLGA8DPQ0D2H9 430 aa12.96□□□□□ -0.33
RANBP3-202ENST00000340578 ZNF174Q15697 407 aa12.96□□□□□ -0.33
RANBP3-202ENST00000340578 NYAP1Q6ZVC0 841 aa12.96□□□□□ -0.33
RANBP3-202ENST00000340578 DZIP1Q86YF9 867 aaKnown RBP12.96□□□□□ -0.33
RANBP3-202ENST00000340578 EPSTI1Q96J88 318 aa12.96□□□□□ -0.33
RANBP3-202ENST00000340578 NCAPGQ9BPX3 1015 aa12.96□□□□□ -0.33
RANBP3-202ENST00000340578 TMEM232C9JQI7 657 aa12.96□□□□□ -0.34
RANBP3-202ENST00000340578 CALM1P0DP23 149 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms