RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 OTUD6AQ7L8S5 288 aa14.5□□□□□ -0.09
LIN54-201ENST00000340417 MIER3Q7Z3K6 550 aa14.5□□□□□ -0.09
LIN54-201ENST00000340417 ARHGAP23Q9P227 1491 aa14.5□□□□□ -0.09
LIN54-201ENST00000340417 SCARF1Q14162 830 aa14.5□□□□□ -0.09
LIN54-201ENST00000340417 ANGEL2Q5VTE6 544 aaKnown RBP14.5□□□□□ -0.09
LIN54-201ENST00000340417 RSPH3Q86UC2 560 aa14.5□□□□□ -0.09
LIN54-201ENST00000340417 FHDC1Q9C0D6 1143 aaPredicted RBP14.5□□□□□ -0.09
LIN54-201ENST00000340417 GH2P01242 217 aa14.49□□□□□ -0.09
LIN54-201ENST00000340417 STRIP1Q5VSL9 837 aa14.49□□□□□ -0.09
LIN54-201ENST00000340417 SEPT14Q6ZU15 432 aa14.49□□□□□ -0.09
LIN54-201ENST00000340417 KIAA1328Q86T90 577 aa14.49□□□□□ -0.09
LIN54-201ENST00000340417 SNAP23O00161 211 aa14.49□□□□□ -0.09
LIN54-201ENST00000340417 PLSCR1O15162 318 aa14.49□□□□□ -0.09
LIN54-201ENST00000340417 ADD2P35612 726 aa14.49□□□□□ -0.09
LIN54-201ENST00000340417 POLA2Q14181 598 aa14.49□□□□□ -0.09
LIN54-201ENST00000340417 PSMD14O00487 310 aa14.49□□□□□ -0.09
LIN54-201ENST00000340417 TDRD12Q587J7 1177 aaKnown RBP14.49□□□□□ -0.09
LIN54-201ENST00000340417 RSBN1LQ6PCB5 846 aaPredicted RBP14.49□□□□□ -0.09
LIN54-201ENST00000340417 MNS1Q8NEH6 495 aa14.49□□□□□ -0.09
LIN54-201ENST00000340417 NR1I2O75469 434 aa14.49□□□□□ -0.09
LIN54-201ENST00000340417 HSPD1P10809 573 aaKnown RBP14.49□□□□□ -0.09
LIN54-201ENST00000340417 FASTKD5Q7L8L6 764 aaKnown RBP14.49□□□□□ -0.09
LIN54-201ENST00000340417 LCORLQ8N3X6 602 aa14.49□□□□□ -0.09
LIN54-201ENST00000340417 SH3RF3Q8TEJ3 882 aaPredicted RBP14.49□□□□□ -0.09
LIN54-201ENST00000340417 RRAGCQ9HB90 399 aa14.49□□□□□ -0.09
LIN54-201ENST00000340417 C3P01024 1663 aa14.49□□□□□ -0.09
LIN54-201ENST00000340417 ZSCAN22P10073 491 aaPredicted RBP14.49□□□□□ -0.09
LIN54-201ENST00000340417 TAF1CQ15572 869 aaPredicted RBP14.49□□□□□ -0.09
LIN54-201ENST00000340417 ISM2Q6H9L7 571 aa14.49□□□□□ -0.09
LIN54-201ENST00000340417 ZNF34Q8IZ26 560 aa14.49□□□□□ -0.09
LIN54-201ENST00000340417 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.49□□□□□ -0.09
LIN54-201ENST00000340417 AMNQ9BXJ7 453 aa14.49□□□□□ -0.09
LIN54-201ENST00000340417 VWA3AA6NCI4 1184 aa14.48□□□□□ -0.09
LIN54-201ENST00000340417 IGBP1P78318 339 aa14.48□□□□□ -0.09
LIN54-201ENST00000340417 CD2APQ9Y5K6 639 aa14.48□□□□□ -0.09
LIN54-201ENST00000340417 VEGFAP15692 232 aaPredicted RBP14.48□□□□□ -0.09
LIN54-201ENST00000340417 GSE1Q14687 1217 aa14.48□□□□□ -0.09
LIN54-201ENST00000340417 BRAPQ7Z569 592 aa14.48□□□□□ -0.09
LIN54-201ENST00000340417 ZNF354CQ86Y25 554 aa14.48□□□□□ -0.09
LIN54-201ENST00000340417 CCDC65Q8IXS2 484 aa14.48□□□□□ -0.09
LIN54-201ENST00000340417 HOXC10Q9NYD6 342 aa14.48□□□□□ -0.09
LIN54-201ENST00000340417 PCDHA1Q9Y5I3 950 aa14.48□□□□□ -0.09
LIN54-201ENST00000340417 MRVI1Q9Y6F6 885 aa14.48□□□□□ -0.09
LIN54-201ENST00000340417 FGAP02671 866 aa14.48□□□□□ -0.09
LIN54-201ENST00000340417 RPS12P25398 132 aaKnown RBP14.48□□□□□ -0.09
LIN54-201ENST00000340417 PRDX5P30044 214 aa14.48□□□□□ -0.09
LIN54-201ENST00000340417 ASPRV1Q53RT3 343 aa14.48□□□□□ -0.09
LIN54-201ENST00000340417 TMEM179Q6ZVK1 233 aa14.48□□□□□ -0.09
LIN54-201ENST00000340417 ANTXR1Q9H6X2 564 aa14.48□□□□□ -0.09
LIN54-201ENST00000340417 NCOA5Q9HCD5 579 aaKnown RBP14.48□□□□□ -0.09
LIN54-201ENST00000340417 A0A0D9SFI3 127 aa14.48□□□□□ -0.09
LIN54-201ENST00000340417 PALM3A6NDB9 673 aaPredicted RBP14.48□□□□□ -0.09
LIN54-201ENST00000340417 SPA17Q15506 151 aa14.48□□□□□ -0.09
LIN54-201ENST00000340417 FAM160B1Q5W0V3 765 aa14.48□□□□□ -0.09
LIN54-201ENST00000340417 SV2BQ7L1I2 683 aa14.48□□□□□ -0.09
LIN54-201ENST00000340417 EPB41L2O43491 1005 aaKnown RBP14.48□□□□□ -0.09
LIN54-201ENST00000340417 CALCRLQ16602 461 aa14.48□□□□□ -0.09
LIN54-201ENST00000340417 CDC37L1Q7L3B6 337 aa14.48□□□□□ -0.09
LIN54-201ENST00000340417 FAM160B2Q86V87 743 aa14.48□□□□□ -0.09
LIN54-201ENST00000340417 PHKBQ93100 1093 aa14.48□□□□□ -0.09
LIN54-201ENST00000340417 DYNLL2Q96FJ2 89 aa14.48□□□□□ -0.09
LIN54-201ENST00000340417 FAM193BQ96PV7 902 aaPredicted RBP14.48□□□□□ -0.09
LIN54-201ENST00000340417 FNBP1Q96RU3 617 aa14.48□□□□□ -0.09
LIN54-201ENST00000340417 DDX19AQ9NUU7 478 aaKnown RBP14.48□□□□□ -0.09
LIN54-201ENST00000340417 GDPD2Q9HCC8 539 aa14.47□□□□□ -0.09
LIN54-201ENST00000340417 ZNF710Q8N1W2 664 aa14.47□□□□□ -0.09
LIN54-201ENST00000340417 TMOD1P28289 359 aa14.47□□□□□ -0.09
LIN54-201ENST00000340417 RASSF7Q02833 373 aa14.47□□□□□ -0.09
LIN54-201ENST00000340417 CCDC117Q8IWD4 279 aaPredicted RBP14.47□□□□□ -0.09
LIN54-201ENST00000340417 SPTLC2O15270 562 aa14.47□□□□□ -0.09
LIN54-201ENST00000340417 SREBF2Q12772 1141 aa14.47□□□□□ -0.09
LIN54-201ENST00000340417 SF3B3Q15393 1217 aaKnown RBP14.47□□□□□ -0.09
LIN54-201ENST00000340417 EEPD1Q7L9B9 569 aa14.47□□□□□ -0.09
LIN54-201ENST00000340417 ZFYVE28Q9HCC9 887 aa14.47□□□□□ -0.09
LIN54-201ENST00000340417 PRKAB2O43741 272 aa14.47□□□□□ -0.09
LIN54-201ENST00000340417 MFSD14CQ5VZR4 134 aa14.47□□□□□ -0.09
LIN54-201ENST00000340417 TBC1D5Q92609 795 aa14.47□□□□□ -0.09
LIN54-201ENST00000340417 EPHX2P34913 555 aa14.46□□□□□ -0.09
LIN54-201ENST00000340417 SYDE2Q5VT97 1194 aa14.46□□□□□ -0.09
LIN54-201ENST00000340417 USP17L2Q6R6M4 530 aa14.46□□□□□ -0.09
LIN54-201ENST00000340417 RUFY1Q96T51 708 aa14.46□□□□□ -0.09
LIN54-201ENST00000340417 EXOC7Q9UPT5 735 aa14.46□□□□□ -0.09
LIN54-201ENST00000340417 ITSN1Q15811 1721 aa14.46□□□□□ -0.09
LIN54-201ENST00000340417 USP17L10C9JJH3 530 aa14.46□□□□□ -0.09
LIN54-201ENST00000340417 SPP2Q13103 211 aa14.46□□□□□ -0.09
LIN54-201ENST00000340417 TRIM28Q13263 835 aaKnown RBP14.46□□□□□ -0.09
LIN54-201ENST00000340417 INTS5Q6P9B9 1019 aaKnown RBP14.46□□□□□ -0.09
LIN54-201ENST00000340417 TAF4BQ92750 862 aa14.46□□□□□ -0.09
LIN54-201ENST00000340417 PIH1D3Q9NQM4 214 aaKnown RBP14.46□□□□□ -0.09
LIN54-201ENST00000340417 GLIPR1L2Q4G1C9 344 aa14.46□□□□□ -0.09
LIN54-201ENST00000340417 TNPO2O14787 897 aaKnown RBP14.46□□□□□ -0.1
LIN54-201ENST00000340417 PSMA7O14818 248 aa14.46□□□□□ -0.1
LIN54-201ENST00000340417 DDAH1O94760 285 aa14.46□□□□□ -0.1
LIN54-201ENST00000340417 CDK8P49336 464 aa14.46□□□□□ -0.1
LIN54-201ENST00000340417 PRR16Q569H4 304 aa14.46□□□□□ -0.1
LIN54-201ENST00000340417 SNX14Q9Y5W7 946 aa14.46□□□□□ -0.1
LIN54-201ENST00000340417 TNS2Q63HR2 1409 aa14.46□□□□□ -0.1
LIN54-201ENST00000340417 PLCD1P51178 756 aa14.45□□□□□ -0.1
LIN54-201ENST00000340417 EPHA10Q5JZY3 1008 aa14.45□□□□□ -0.1
LIN54-201ENST00000340417 DNM3Q9UQ16 869 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms