RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 SUPT3HO75486 399 aa13.96□□□□□ -0.18
BRPF3-201ENST00000339717 HARSP12081 509 aaKnown RBP13.96□□□□□ -0.18
BRPF3-201ENST00000339717 MLKLQ8NB16 471 aa13.96□□□□□ -0.18
BRPF3-201ENST00000339717 COG1Q8WTW3 980 aa13.96□□□□□ -0.18
BRPF3-201ENST00000339717 DYDC2Q96IM9 177 aa13.96□□□□□ -0.18
BRPF3-201ENST00000339717 HYOU1Q9Y4L1 999 aa13.96□□□□□ -0.18
BRPF3-201ENST00000339717 U3KPZ7 1027 aaPredicted RBP13.96□□□□□ -0.18
BRPF3-201ENST00000339717 HGSO14964 777 aaPredicted RBP13.95□□□□□ -0.18
BRPF3-201ENST00000339717 HSPA9P38646 679 aaKnown RBP13.95□□□□□ -0.18
BRPF3-201ENST00000339717 PLEKHM2Q8IWE5 1019 aa13.95□□□□□ -0.18
BRPF3-201ENST00000339717 SUCLA2Q9P2R7 463 aaPredicted RBP13.95□□□□□ -0.18
BRPF3-201ENST00000339717 ANKRD30BQ9BXX2 1392 aa13.95□□□□□ -0.18
BRPF3-201ENST00000339717 PRDM2Q13029 1718 aa13.95□□□□□ -0.18
BRPF3-201ENST00000339717 MRPL12P52815 198 aaKnown RBP13.95□□□□□ -0.18
BRPF3-201ENST00000339717 TMCO5AQ8N6Q1 288 aa13.95□□□□□ -0.18
BRPF3-201ENST00000339717 ZNF473Q8WTR7 871 aaKnown RBP13.95□□□□□ -0.18
BRPF3-201ENST00000339717 OSBPL5Q9H0X9 879 aaPredicted RBP13.95□□□□□ -0.18
BRPF3-201ENST00000339717 ANKRD50Q9ULJ7 1429 aa13.95□□□□□ -0.18
BRPF3-201ENST00000339717 PPP1R37O75864 691 aa13.95□□□□□ -0.18
BRPF3-201ENST00000339717 SERPINB4P48594 390 aa13.95□□□□□ -0.18
BRPF3-201ENST00000339717 NOX5Q96PH1 765 aa13.95□□□□□ -0.18
BRPF3-201ENST00000339717 MTRQ99707 1265 aa13.95□□□□□ -0.18
BRPF3-201ENST00000339717 PRM3Q9NNZ6 103 aa13.95□□□□□ -0.18
BRPF3-201ENST00000339717 AKAP2Q9Y2D5 859 aa13.95□□□□□ -0.18
BRPF3-201ENST00000339717 CUTAO60888 179 aa13.94□□□□□ -0.18
BRPF3-201ENST00000339717 GUCY2FP51841 1108 aa13.94□□□□□ -0.18
BRPF3-201ENST00000339717 PDE1AP54750 535 aa13.94□□□□□ -0.18
BRPF3-201ENST00000339717 SKOR1P84550 965 aa13.94□□□□□ -0.18
BRPF3-201ENST00000339717 PSMD6Q15008 389 aa13.94□□□□□ -0.18
BRPF3-201ENST00000339717 ZBTB40Q9NUA8 1239 aa13.94□□□□□ -0.18
BRPF3-201ENST00000339717 SEPT10Q9P0V9 454 aa13.94□□□□□ -0.18
BRPF3-201ENST00000339717 EXOC6BQ9Y2D4 811 aa13.94□□□□□ -0.18
BRPF3-201ENST00000339717 FSBPO95073 299 aa13.94□□□□□ -0.18
BRPF3-201ENST00000339717 EEF2P13639 858 aaKnown RBP13.94□□□□□ -0.18
BRPF3-201ENST00000339717 UBXN1Q04323 297 aa13.94□□□□□ -0.18
BRPF3-201ENST00000339717 BIRC3Q13489 604 aa13.94□□□□□ -0.18
BRPF3-201ENST00000339717 ZNF449Q6P9G9 518 aa13.94□□□□□ -0.18
BRPF3-201ENST00000339717 EXOC8Q8IYI6 725 aa13.94□□□□□ -0.18
BRPF3-201ENST00000339717 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.94□□□□□ -0.188e-7■■□□□ 14.4
BRPF3-201ENST00000339717 CORO1CQ9ULV4 474 aaPredicted RBP13.94□□□□□ -0.18
BRPF3-201ENST00000339717 P4HA2O15460 535 aa13.94□□□□□ -0.18
BRPF3-201ENST00000339717 CLUL1Q15846 466 aa13.94□□□□□ -0.18
BRPF3-201ENST00000339717 KCNV2Q8TDN2 545 aa13.94□□□□□ -0.18
BRPF3-201ENST00000339717 SPINK5Q9NQ38 1064 aaPredicted RBP13.94□□□□□ -0.18
BRPF3-201ENST00000339717 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.94□□□□□ -0.18
BRPF3-201ENST00000339717 KCNA3P22001 575 aa13.94□□□□□ -0.18
BRPF3-201ENST00000339717 DESI2Q9BSY9 194 aa13.94□□□□□ -0.18
BRPF3-201ENST00000339717 DLGAP2Q9P1A6 1054 aa13.94□□□□□ -0.18
BRPF3-201ENST00000339717 ATP2A1O14983 1001 aa13.93□□□□□ -0.18
BRPF3-201ENST00000339717 KRT38O76015 456 aa13.93□□□□□ -0.18
BRPF3-201ENST00000339717 GCLCP48506 637 aaPredicted RBP13.93□□□□□ -0.18
BRPF3-201ENST00000339717 PSMC1P62191 440 aaKnown RBP13.93□□□□□ -0.18
BRPF3-201ENST00000339717 GJC2Q5T442 439 aaPredicted RBP13.93□□□□□ -0.18
BRPF3-201ENST00000339717 SLC35F6Q8N357 371 aa13.93□□□□□ -0.18
BRPF3-201ENST00000339717 PPP1R14BQ96C90 147 aa13.93□□□□□ -0.18
BRPF3-201ENST00000339717 CARD8Q9Y2G2 431 aa13.93□□□□□ -0.18
BRPF3-201ENST00000339717 IL16Q14005 1332 aa13.93□□□□□ -0.18
BRPF3-201ENST00000339717 CAMSAP2Q08AD1 1489 aa13.93□□□□□ -0.18
BRPF3-201ENST00000339717 ALDH1L1O75891 902 aa13.93□□□□□ -0.18
BRPF3-201ENST00000339717 ANP32DO95626 131 aa13.93□□□□□ -0.18
BRPF3-201ENST00000339717 S100A1P23297 94 aa13.93□□□□□ -0.18
BRPF3-201ENST00000339717 DHX9Q08211 1270 aaKnown RBP13.93□□□□□ -0.18
BRPF3-201ENST00000339717 SNX1Q13596 522 aa13.93□□□□□ -0.18
BRPF3-201ENST00000339717 C6orf118Q5T5N4 469 aa13.93□□□□□ -0.18
BRPF3-201ENST00000339717 RUBCNQ92622 972 aa13.93□□□□□ -0.18
BRPF3-201ENST00000339717 WDR37Q9Y2I8 494 aa13.93□□□□□ -0.18
BRPF3-201ENST00000339717 KIAA1107Q9UPP5 1409 aa13.93□□□□□ -0.18
BRPF3-201ENST00000339717 MINK1Q8N4C8 1332 aaPredicted RBP13.93□□□□□ -0.18
BRPF3-201ENST00000339717 CCNHP51946 323 aaPredicted RBP13.93□□□□□ -0.18
BRPF3-201ENST00000339717 MAP3K5Q99683 1374 aa13.93□□□□□ -0.18
BRPF3-201ENST00000339717 LIN7AO14910 233 aaPredicted RBP13.93□□□□□ -0.18
BRPF3-201ENST00000339717 LSM1O15116 133 aaKnown RBP13.93□□□□□ -0.18
BRPF3-201ENST00000339717 CWF19L1Q69YN2 538 aaKnown RBP13.93□□□□□ -0.18
BRPF3-201ENST00000339717 AFAP1Q8N556 730 aa13.93□□□□□ -0.18
BRPF3-201ENST00000339717 TRIM47Q96LD4 638 aa13.93□□□□□ -0.18
BRPF3-201ENST00000339717 ZNF692Q9BU19 519 aaPredicted RBP13.93□□□□□ -0.18
BRPF3-201ENST00000339717 NUP58Q9BVL2 599 aa13.93□□□□□ -0.18
BRPF3-201ENST00000339717 FUT8Q9BYC5 575 aa13.93□□□□□ -0.18
BRPF3-201ENST00000339717 BICRAQ9NZM4 1560 aa13.93□□□□□ -0.18
BRPF3-201ENST00000339717 PARP2Q9UGN5 583 aa13.93□□□□□ -0.18
BRPF3-201ENST00000339717 DNAJC9Q8WXX5 260 aa13.92□□□□□ -0.18
BRPF3-201ENST00000339717 SLF1Q9BQI6 1058 aa13.92□□□□□ -0.18
BRPF3-201ENST00000339717 RAB17Q9H0T7 212 aa13.92□□□□□ -0.18
BRPF3-201ENST00000339717 BMP2KQ9NSY1 1161 aaPredicted RBP13.92□□□□□ -0.18
BRPF3-201ENST00000339717 IL1RAPL1Q9NZN1 696 aa13.92□□□□□ -0.18
BRPF3-201ENST00000339717 MAGEA13PA6NCF6 341 aa13.92□□□□□ -0.18
BRPF3-201ENST00000339717 MGEA5O60502 916 aa13.92□□□□□ -0.18
BRPF3-201ENST00000339717 RCN1Q15293 331 aa13.92□□□□□ -0.18
BRPF3-201ENST00000339717 RRAGBQ5VZM2 374 aa13.92□□□□□ -0.18
BRPF3-201ENST00000339717 ZNF280DQ6N043 979 aa13.92□□□□□ -0.18
BRPF3-201ENST00000339717 NYAP1Q6ZVC0 841 aa13.92□□□□□ -0.18
BRPF3-201ENST00000339717 SCHIP1Q9P0W5 487 aaPredicted RBP13.92□□□□□ -0.18
BRPF3-201ENST00000339717 NSFL1CQ9UNZ2 370 aaKnown RBP13.92□□□□□ -0.18
BRPF3-201ENST00000339717 SOS1Q07889 1333 aaPredicted RBP13.92□□□□□ -0.18
BRPF3-201ENST00000339717 RAD21O60216 631 aa13.92□□□□□ -0.18
BRPF3-201ENST00000339717 TSHZ1Q6ZSZ6 1077 aa13.92□□□□□ -0.18
BRPF3-201ENST00000339717 UBE2Q1Q7Z7E8 422 aa13.92□□□□□ -0.18
BRPF3-201ENST00000339717 RBM12BQ8IXT5 1001 aaKnown RBP13.92□□□□□ -0.18
BRPF3-201ENST00000339717 EHBP1L1Q8N3D4 1523 aa13.92□□□□□ -0.18
BRPF3-201ENST00000339717 BICDL2A1A5D9 508 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms