RNA–Protein interactions for RNA: ENST00000338748.9

SCNN1A-202, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 2,203 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-202ENST00000338748 RXRBP28702 533 aa18.74■□□□□ 0.59
SCNN1A-202ENST00000338748 AKAP17AQ02040 695 aaKnown RBP18.74■□□□□ 0.59
SCNN1A-202ENST00000338748 NPY5RQ15761 445 aa18.74■□□□□ 0.59
SCNN1A-202ENST00000338748 DOK7Q18PE1 504 aa18.74■□□□□ 0.59
SCNN1A-202ENST00000338748 NOM1Q5C9Z4 860 aaKnown RBP18.74■□□□□ 0.59
SCNN1A-202ENST00000338748 CTCFLQ8NI51 663 aaPredicted RBP18.74■□□□□ 0.59
SCNN1A-202ENST00000338748 FBXW7Q969H0 707 aa18.74■□□□□ 0.59
SCNN1A-202ENST00000338748 SDF4Q9BRK5 362 aa18.74■□□□□ 0.59
SCNN1A-202ENST00000338748 PHF20Q9BVI0 1012 aa18.74■□□□□ 0.59
SCNN1A-202ENST00000338748 MKNK2Q9HBH9 465 aa18.74■□□□□ 0.59
SCNN1A-202ENST00000338748 PARP3Q9Y6F1 533 aa18.74■□□□□ 0.59
SCNN1A-202ENST00000338748 ADAMTSL1Q8N6G6 1762 aa18.74■□□□□ 0.59
SCNN1A-202ENST00000338748 PTMAP06454 111 aaKnown RBP18.74■□□□□ 0.59
SCNN1A-202ENST00000338748 RASA1P20936 1047 aa18.74■□□□□ 0.59
SCNN1A-202ENST00000338748 RASGRP2Q7LDG7 609 aa18.74■□□□□ 0.59
SCNN1A-202ENST00000338748 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.74■□□□□ 0.59
SCNN1A-202ENST00000338748 HPSEQ9Y251 543 aa18.74■□□□□ 0.59
SCNN1A-202ENST00000338748 ZKSCAN5Q9Y2L8 839 aa18.74■□□□□ 0.59
SCNN1A-202ENST00000338748 DAGLAQ9Y4D2 1042 aa18.74■□□□□ 0.59
SCNN1A-202ENST00000338748 STX1AQ16623 288 aa18.73■□□□□ 0.59
SCNN1A-202ENST00000338748 SPECC1Q5M775 1068 aa18.73■□□□□ 0.59
SCNN1A-202ENST00000338748 TBC1D22AQ8WUA7 517 aa18.73■□□□□ 0.59
SCNN1A-202ENST00000338748 FAM163AQ96GL9 167 aaPredicted RBP18.73■□□□□ 0.59
SCNN1A-202ENST00000338748 CABP5Q9NP86 173 aa18.73■□□□□ 0.59
SCNN1A-202ENST00000338748 WNT7AO00755 349 aa18.73■□□□□ 0.59
SCNN1A-202ENST00000338748 ADAMTS3O15072 1205 aa18.73■□□□□ 0.59
SCNN1A-202ENST00000338748 ATP2B1P20020 1258 aa18.73■□□□□ 0.59
SCNN1A-202ENST00000338748 IQCB1Q15051 598 aa18.73■□□□□ 0.59
SCNN1A-202ENST00000338748 STAG2Q8N3U4 1231 aa18.73■□□□□ 0.59
SCNN1A-202ENST00000338748 PNMA1Q8ND90 353 aa18.73■□□□□ 0.59
SCNN1A-202ENST00000338748 COA1Q9GZY4 146 aa18.73■□□□□ 0.59
SCNN1A-202ENST00000338748 MSNP26038 577 aaKnown RBP18.72■□□□□ 0.59
SCNN1A-202ENST00000338748 DPP8Q6V1X1 898 aaPredicted RBP18.72■□□□□ 0.59
SCNN1A-202ENST00000338748 ZNF830Q96NB3 372 aaPredicted RBP18.72■□□□□ 0.59
SCNN1A-202ENST00000338748 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.72■□□□□ 0.59
SCNN1A-202ENST00000338748 MYH1P12882 1939 aa18.72■□□□□ 0.59
SCNN1A-202ENST00000338748 TSPY3P0CV98 308 aa18.72■□□□□ 0.59
SCNN1A-202ENST00000338748 TSPY8P0CW00 308 aa18.72■□□□□ 0.59
SCNN1A-202ENST00000338748 PDE6BP35913 854 aa18.72■□□□□ 0.59
SCNN1A-202ENST00000338748 SLC35G1Q2M3R5 365 aa18.72■□□□□ 0.59
SCNN1A-202ENST00000338748 RESP18Q5W5W9 173 aa18.72■□□□□ 0.59
SCNN1A-202ENST00000338748 JMYQ8N9B5 988 aa18.72■□□□□ 0.59
SCNN1A-202ENST00000338748 MASTLQ96GX5 879 aa18.72■□□□□ 0.59
SCNN1A-202ENST00000338748 KAT14Q9H8E8 782 aa18.72■□□□□ 0.59
SCNN1A-202ENST00000338748 RILPL1Q5EBL4 403 aa18.71■□□□□ 0.59
SCNN1A-202ENST00000338748 DGKHQ86XP1 1220 aa18.71■□□□□ 0.59
SCNN1A-202ENST00000338748 AMOTL1Q8IY63 956 aa18.71■□□□□ 0.59
SCNN1A-202ENST00000338748 FLAD1Q8NFF5 587 aa18.71■□□□□ 0.59
SCNN1A-202ENST00000338748 ZNF622Q969S3 477 aaKnown RBP eCLIP18.71■□□□□ 0.59
SCNN1A-202ENST00000338748 ZC3H12CQ9C0D7 883 aaKnown RBP18.71■□□□□ 0.59
SCNN1A-202ENST00000338748 KIAA1468Q9P260 1216 aa18.71■□□□□ 0.59
SCNN1A-202ENST00000338748 MTMR7Q9Y216 660 aa18.71■□□□□ 0.59
SCNN1A-202ENST00000338748 FOCADQ5VW36 1801 aa18.71■□□□□ 0.59
SCNN1A-202ENST00000338748 SYKP43405 635 aa18.7■□□□□ 0.58
SCNN1A-202ENST00000338748 CDK8P49336 464 aa18.7■□□□□ 0.58
SCNN1A-202ENST00000338748 C16orf86Q6ZW13 317 aa18.7■□□□□ 0.58
SCNN1A-202ENST00000338748 KCNQ5Q9NR82 932 aa18.7■□□□□ 0.58
SCNN1A-202ENST00000338748 RGS17Q9UGC6 210 aaPredicted RBP18.7■□□□□ 0.58
SCNN1A-202ENST00000338748 FBXO2Q9UK22 296 aaPredicted RBP18.7■□□□□ 0.58
SCNN1A-202ENST00000338748 UTRNP46939 3433 aa18.7■□□□□ 0.58
SCNN1A-202ENST00000338748 FAM237AA0A1B0GTK4 181 aa18.7■□□□□ 0.58
SCNN1A-202ENST00000338748 HMGB2P26583 209 aaKnown RBP18.7■□□□□ 0.58
SCNN1A-202ENST00000338748 ALDH1B1P30837 517 aa18.7■□□□□ 0.58
SCNN1A-202ENST00000338748 KRT2P35908 639 aa18.7■□□□□ 0.58
SCNN1A-202ENST00000338748 DPCR1Q3MIW9 517 aa18.7■□□□□ 0.58
SCNN1A-202ENST00000338748 ZNF444Q8N0Y2 327 aaPredicted RBP18.7■□□□□ 0.58
SCNN1A-202ENST00000338748 KRI1Q8N9T8 703 aaKnown RBP18.7■□□□□ 0.58
SCNN1A-202ENST00000338748 ANKS1AQ92625 1134 aa18.7■□□□□ 0.58
SCNN1A-202ENST00000338748 TNFRSF25Q93038 417 aa18.7■□□□□ 0.58
SCNN1A-202ENST00000338748 STX8Q9UNK0 236 aa18.7■□□□□ 0.58
SCNN1A-202ENST00000338748 BIN1O00499 593 aa18.69■□□□□ 0.58
SCNN1A-202ENST00000338748 CUTAO60888 179 aa18.69■□□□□ 0.58
SCNN1A-202ENST00000338748 DHX40Q8IX18 779 aaKnown RBP18.69■□□□□ 0.58
SCNN1A-202ENST00000338748 SPC24Q8NBT2 197 aa18.69■□□□□ 0.58
SCNN1A-202ENST00000338748 TMEM47Q9BQJ4 181 aa18.69■□□□□ 0.58
SCNN1A-202ENST00000338748 TTC12Q9H892 705 aaPredicted RBP18.69■□□□□ 0.58
SCNN1A-202ENST00000338748 MAD2L2Q9UI95 211 aa18.69■□□□□ 0.58
SCNN1A-202ENST00000338748 QSER1Q2KHR3 1735 aa18.69■□□□□ 0.58
SCNN1A-202ENST00000338748 SCG2P13521 617 aa18.69■□□□□ 0.58
SCNN1A-202ENST00000338748 PLCG2P16885 1265 aa18.69■□□□□ 0.58
SCNN1A-202ENST00000338748 XBP1P17861 261 aa18.69■□□□□ 0.58
SCNN1A-202ENST00000338748 SCNN1DP51172 638 aa18.69■□□□□ 0.58
SCNN1A-202ENST00000338748 PICALMQ13492 652 aa18.69■□□□□ 0.58
SCNN1A-202ENST00000338748 CERS3Q8IU89 383 aa18.69■□□□□ 0.58
SCNN1A-202ENST00000338748 DDX4Q9NQI0 724 aaKnown RBP18.69■□□□□ 0.58
SCNN1A-202ENST00000338748 TTF2Q9UNY4 1162 aaKnown RBP18.69■□□□□ 0.58
SCNN1A-202ENST00000338748 SLX4Q8IY92 1834 aa18.68■□□□□ 0.58
SCNN1A-202ENST00000338748 PTPREP23469 700 aa18.68■□□□□ 0.58
SCNN1A-202ENST00000338748 PFKFB3Q16875 520 aaPredicted RBP18.68■□□□□ 0.58
SCNN1A-202ENST00000338748 C2CD5Q86YS7 1000 aa18.68■□□□□ 0.58
SCNN1A-202ENST00000338748 EYA3Q99504 573 aa18.68■□□□□ 0.58
SCNN1A-202ENST00000338748 DBNDD1Q9H9R9 158 aa18.68■□□□□ 0.58
SCNN1A-202ENST00000338748 TCP11L1Q9NUJ3 509 aa18.68■□□□□ 0.58
SCNN1A-202ENST00000338748 ANO10Q9NW15 660 aa18.68■□□□□ 0.58
SCNN1A-202ENST00000338748 ZNF219Q9P2Y4 722 aaPredicted RBP18.68■□□□□ 0.58
SCNN1A-202ENST00000338748 EZH2Q15910 746 aaKnown RBP18.68■□□□□ 0.58
SCNN1A-202ENST00000338748 SLF2Q8IX21 1173 aa18.68■□□□□ 0.58
SCNN1A-202ENST00000338748 GPKOWQ92917 476 aaPredicted RBP eCLIP18.68■□□□□ 0.58
SCNN1A-202ENST00000338748 SCN9AQ15858 1988 aa18.67■□□□□ 0.58
SCNN1A-202ENST00000338748 CYTH3O43739 400 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms