RNA–Protein interactions for RNA: ENST00000338700.9

TRIM2-201, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 6,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-201ENST00000338700 AKR1B15C9JRZ8 316 aaPredicted RBP8.62□□□□□ -1.03
TRIM2-201ENST00000338700 NPR1P16066 1061 aa8.62□□□□□ -1.03
TRIM2-201ENST00000338700 PPP1R7Q15435 360 aa8.62□□□□□ -1.03
TRIM2-201ENST00000338700 CFBP00751 764 aa8.62□□□□□ -1.03
TRIM2-201ENST00000338700 NOLC1Q14978 699 aaKnown RBP eCLIP8.62□□□□□ -1.03
TRIM2-201ENST00000338700 CCDC63Q8NA47 563 aa8.62□□□□□ -1.03
TRIM2-201ENST00000338700 KIFC2Q96AC6 838 aa8.62□□□□□ -1.03
TRIM2-201ENST00000338700 FAM169AQ9Y6X4 670 aa8.62□□□□□ -1.03
TRIM2-201ENST00000338700 KDM2BQ8NHM5 1336 aa8.62□□□□□ -1.03
TRIM2-201ENST00000338700 MADDQ8WXG6 1647 aa8.62□□□□□ -1.03
TRIM2-201ENST00000338700 ARID4AP29374 1257 aaPredicted RBP8.62□□□□□ -1.03
TRIM2-201ENST00000338700 KCNQ4P56696 695 aa8.62□□□□□ -1.03
TRIM2-201ENST00000338700 TNNC1P63316 161 aa8.62□□□□□ -1.03
TRIM2-201ENST00000338700 RNF34Q969K3 372 aa8.62□□□□□ -1.03
TRIM2-201ENST00000338700 ZNF830Q96NB3 372 aaPredicted RBP8.62□□□□□ -1.03
TRIM2-201ENST00000338700 NOX5Q96PH1 765 aa8.62□□□□□ -1.03
TRIM2-201ENST00000338700 CSRNP2Q9H175 543 aa8.62□□□□□ -1.03
TRIM2-201ENST00000338700 MTRF1LQ9UGC7 380 aaKnown RBP8.62□□□□□ -1.03
TRIM2-201ENST00000338700 BLMP54132 1417 aaPredicted RBP8.62□□□□□ -1.03
TRIM2-201ENST00000338700 CRB1P82279 1406 aa8.62□□□□□ -1.03
TRIM2-201ENST00000338700 PCCAP05165 728 aaPredicted RBP8.62□□□□□ -1.03
TRIM2-201ENST00000338700 RAB3IL1Q8TBN0 382 aa8.62□□□□□ -1.03
TRIM2-201ENST00000338700 OTUD7AQ8TE49 926 aaPredicted RBP8.62□□□□□ -1.03
TRIM2-201ENST00000338700 ARFGAP3Q9NP61 516 aa8.62□□□□□ -1.03
TRIM2-201ENST00000338700 RNF181Q9P0P0 153 aa8.62□□□□□ -1.03
TRIM2-201ENST00000338700 AGTPBP1Q9UPW5 1226 aa8.62□□□□□ -1.03
TRIM2-201ENST00000338700 ASIC2Q16515 512 aa8.62□□□□□ -1.03
TRIM2-201ENST00000338700 CCDC114Q96M63 670 aa8.62□□□□□ -1.03
TRIM2-201ENST00000338700 NCOA5Q9HCD5 579 aaKnown RBP8.62□□□□□ -1.03
TRIM2-201ENST00000338700 C1orf167Q5SNV9 1468 aa8.62□□□□□ -1.03
TRIM2-201ENST00000338700 ADRA2BP18089 450 aa8.62□□□□□ -1.03
TRIM2-201ENST00000338700 TBC1D8BQ0IIM8 1120 aa8.62□□□□□ -1.03
TRIM2-201ENST00000338700 ZNF569Q5MCW4 686 aa8.62□□□□□ -1.03
TRIM2-201ENST00000338700 CFAP58Q5T655 872 aa8.62□□□□□ -1.03
TRIM2-201ENST00000338700 HACE1Q8IYU2 909 aa8.62□□□□□ -1.03
TRIM2-201ENST00000338700 SPC25Q9HBM1 224 aa8.62□□□□□ -1.03
TRIM2-201ENST00000338700 CPS1P31327 1500 aa8.61□□□□□ -1.03
TRIM2-201ENST00000338700 DOK7Q18PE1 504 aa8.61□□□□□ -1.03
TRIM2-201ENST00000338700 OTUD6AQ7L8S5 288 aa8.61□□□□□ -1.03
TRIM2-201ENST00000338700 TTC14Q96N46 770 aa8.61□□□□□ -1.03
TRIM2-201ENST00000338700 MAP3K15Q6ZN16 1313 aa8.61□□□□□ -1.03
TRIM2-201ENST00000338700 MYCT1Q8N699 235 aa8.61□□□□□ -1.03
TRIM2-201ENST00000338700 MASTLQ96GX5 879 aa8.61□□□□□ -1.03
TRIM2-201ENST00000338700 CAPZA3Q96KX2 299 aa8.61□□□□□ -1.03
TRIM2-201ENST00000338700 NAP1L3Q99457 506 aaPredicted RBP8.61□□□□□ -1.03
TRIM2-201ENST00000338700 LPXNO60711 386 aa8.61□□□□□ -1.03
TRIM2-201ENST00000338700 RPS6KA4O75676 772 aa8.61□□□□□ -1.03
TRIM2-201ENST00000338700 PAK1Q13153 545 aa8.61□□□□□ -1.03
TRIM2-201ENST00000338700 KARSQ15046 597 aaKnown RBP8.61□□□□□ -1.03
TRIM2-201ENST00000338700 GNPTABQ3T906 1256 aa8.61□□□□□ -1.03
TRIM2-201ENST00000338700 FAM47AQ5JRC9 791 aa8.61□□□□□ -1.03
TRIM2-201ENST00000338700 CABP7Q86V35 215 aa8.61□□□□□ -1.03
TRIM2-201ENST00000338700 PNMA2Q9UL42 364 aa8.61□□□□□ -1.03
TRIM2-201ENST00000338700 SETD1BQ9UPS6 1966 aaKnown RBP8.61□□□□□ -1.03
TRIM2-201ENST00000338700 SYNRGQ9UMZ2 1314 aa8.61□□□□□ -1.03
TRIM2-201ENST00000338700 POLR2DO15514 142 aaKnown RBP8.61□□□□□ -1.03
TRIM2-201ENST00000338700 KRT9P35527 623 aa8.61□□□□□ -1.03
TRIM2-201ENST00000338700 SUPT20HL1Q3ZLR7 823 aa8.61□□□□□ -1.03
TRIM2-201ENST00000338700 CEP128Q6ZU80 1094 aa8.61□□□□□ -1.03
TRIM2-201ENST00000338700 CSGALNACT2Q8N6G5 542 aa8.61□□□□□ -1.03
TRIM2-201ENST00000338700 NUP58Q9BVL2 599 aa8.61□□□□□ -1.03
TRIM2-201ENST00000338700 ATP8A2Q9NTI2 1148 aa8.61□□□□□ -1.03
TRIM2-201ENST00000338700 E7EWF7 191 aa8.61□□□□□ -1.03
TRIM2-201ENST00000338700 BBOX1O75936 387 aa8.61□□□□□ -1.03
TRIM2-201ENST00000338700 SARNPP82979 210 aaKnown RBP8.61□□□□□ -1.03
TRIM2-201ENST00000338700 REXO1Q8N1G1 1221 aaKnown RBP8.61□□□□□ -1.03
TRIM2-201ENST00000338700 MYL10Q9BUA6 226 aa8.61□□□□□ -1.03
TRIM2-201ENST00000338700 LZTFL1Q9NQ48 299 aa8.61□□□□□ -1.03
TRIM2-201ENST00000338700 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.61□□□□□ -1.03
TRIM2-201ENST00000338700 ALKQ9UM73 1620 aa8.61□□□□□ -1.03
TRIM2-201ENST00000338700 GINS2Q9Y248 185 aa8.61□□□□□ -1.03
TRIM2-201ENST00000338700 IQGAP3Q86VI3 1631 aa8.6□□□□□ -1.03
TRIM2-201ENST00000338700 KDM3AQ9Y4C1 1321 aa8.6□□□□□ -1.03
TRIM2-201ENST00000338700 DYNC1I1O14576 645 aa8.6□□□□□ -1.03
TRIM2-201ENST00000338700 CALCOCO2Q13137 446 aa8.6□□□□□ -1.03
TRIM2-201ENST00000338700 MAEAQ7L5Y9 396 aa8.6□□□□□ -1.03
TRIM2-201ENST00000338700 C2orf69Q8N8R5 385 aa8.6□□□□□ -1.03
TRIM2-201ENST00000338700 ZC3H13Q5T200 1668 aaKnown RBP8.6□□□□□ -1.03
TRIM2-201ENST00000338700 LEO1Q8WVC0 666 aaPredicted RBP8.6□□□□□ -1.03
TRIM2-201ENST00000338700 BAG1Q99933 345 aaPredicted RBP8.6□□□□□ -1.03
TRIM2-201ENST00000338700 SPOPO43791 374 aa8.6□□□□□ -1.03
TRIM2-201ENST00000338700 TERF1P54274 439 aa8.6□□□□□ -1.03
TRIM2-201ENST00000338700 MXRA7P84157 204 aa8.6□□□□□ -1.03
TRIM2-201ENST00000338700 ARHGEF16Q5VV41 709 aa8.6□□□□□ -1.03
TRIM2-201ENST00000338700 KRT40Q6A162 431 aa8.6□□□□□ -1.03
TRIM2-201ENST00000338700 NT5C3AQ9H0P0 336 aa8.6□□□□□ -1.03
TRIM2-201ENST00000338700 ABCA6Q8N139 1617 aa8.6□□□□□ -1.03
TRIM2-201ENST00000338700 HERC4Q5GLZ8 1057 aaPredicted RBP8.6□□□□□ -1.03
TRIM2-201ENST00000338700 CCDC122Q5T0U0 273 aa8.6□□□□□ -1.03
TRIM2-201ENST00000338700 MLKLQ8NB16 471 aa8.6□□□□□ -1.03
TRIM2-201ENST00000338700 CCDC26Q8TAB7 109 aa8.6□□□□□ -1.03
TRIM2-201ENST00000338700 PHKBQ93100 1093 aa8.6□□□□□ -1.03
TRIM2-201ENST00000338700 GPBP1L1Q9HC44 474 aaPredicted RBP8.6□□□□□ -1.03
TRIM2-201ENST00000338700 PRR36Q9H6K5 1346 aa8.6□□□□□ -1.03
TRIM2-201ENST00000338700 SLU7O95391 586 aaKnown RBP8.6□□□□□ -1.03
TRIM2-201ENST00000338700 TTLL7Q6ZT98 887 aa8.6□□□□□ -1.03
TRIM2-201ENST00000338700 SMAP1Q8IYB5 467 aaPredicted RBP8.6□□□□□ -1.03
TRIM2-201ENST00000338700 IL17REQ8NFR9 667 aa8.6□□□□□ -1.03
TRIM2-201ENST00000338700 PPP1R9BQ96SB3 815 aa8.6□□□□□ -1.03
TRIM2-201ENST00000338700 VPS16Q9H269 839 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms