RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 PRR29P0C7W0 189 aa26.58■■□□□ 1.85
CLPTM1-201ENST00000337392 GOLGA8HP0CJ92 632 aa26.58■■□□□ 1.85
CLPTM1-201ENST00000337392 CASP1P29466 404 aa26.58■■□□□ 1.85
CLPTM1-201ENST00000337392 ZRSR1Q15695 479 aaKnown RBP26.58■■□□□ 1.85
CLPTM1-201ENST00000337392 NPY5RQ15761 445 aa26.58■■□□□ 1.85
CLPTM1-201ENST00000337392 MFSD14BQ5SR56 506 aa26.58■■□□□ 1.85
CLPTM1-201ENST00000337392 C12orf60Q5U649 245 aa26.58■■□□□ 1.85
CLPTM1-201ENST00000337392 KRI1Q8N9T8 703 aaKnown RBP26.58■■□□□ 1.85
CLPTM1-201ENST00000337392 WDR66Q8TBY9 1149 aa26.58■■□□□ 1.85
CLPTM1-201ENST00000337392 FBXO2Q9UK22 296 aaPredicted RBP26.58■■□□□ 1.85
CLPTM1-201ENST00000337392 CACTINQ8WUQ7 758 aaKnown RBP26.58■■□□□ 1.85
CLPTM1-201ENST00000337392 FOXP1Q9H334 677 aaPredicted RBP26.58■■□□□ 1.85
CLPTM1-201ENST00000337392 STX8Q9UNK0 236 aa26.58■■□□□ 1.85
CLPTM1-201ENST00000337392 POLR2DO15514 142 aaKnown RBP26.57■■□□□ 1.84
CLPTM1-201ENST00000337392 PDE4BQ07343 736 aa26.57■■□□□ 1.84
CLPTM1-201ENST00000337392 TBC1D16Q8TBP0 767 aa26.57■■□□□ 1.84
CLPTM1-201ENST00000337392 RASGRP4Q8TDF6 673 aa26.57■■□□□ 1.84
CLPTM1-201ENST00000337392 RTFDC1Q9BY42 306 aaPredicted RBP26.57■■□□□ 1.84
CLPTM1-201ENST00000337392 MKNK2Q9HBH9 465 aa26.57■■□□□ 1.84
CLPTM1-201ENST00000337392 BRWD3Q6RI45 1802 aa26.57■■□□□ 1.84
CLPTM1-201ENST00000337392 ORC4O43929 436 aa26.57■■□□□ 1.84
CLPTM1-201ENST00000337392 ZNF174Q15697 407 aa26.57■■□□□ 1.84
CLPTM1-201ENST00000337392 KIAA1551Q9HCM1 1747 aa26.57■■□□□ 1.84
CLPTM1-201ENST00000337392 A0A0U1RQG5 324 aaPredicted RBP26.56■■□□□ 1.84
CLPTM1-201ENST00000337392 ATP1A3P13637 1013 aa26.56■■□□□ 1.84
CLPTM1-201ENST00000337392 LMOD1P29536 600 aaPredicted RBP26.56■■□□□ 1.84
CLPTM1-201ENST00000337392 CNNM3Q8NE01 707 aa26.56■■□□□ 1.84
CLPTM1-201ENST00000337392 EPSTI1Q96J88 318 aa26.56■■□□□ 1.84
CLPTM1-201ENST00000337392 PHF20Q9BVI0 1012 aa26.56■■□□□ 1.84
CLPTM1-201ENST00000337392 CSRNP2Q9H175 543 aa26.56■■□□□ 1.84
CLPTM1-201ENST00000337392 PDS5AQ29RF7 1337 aaKnown RBP26.56■■□□□ 1.84
CLPTM1-201ENST00000337392 SPTY2D1Q68D10 685 aaPredicted RBP26.56■■□□□ 1.84
CLPTM1-201ENST00000337392 JMYQ8N9B5 988 aa26.56■■□□□ 1.84
CLPTM1-201ENST00000337392 CTCFLQ8NI51 663 aaPredicted RBP26.56■■□□□ 1.84
CLPTM1-201ENST00000337392 KIAA1524Q8TCG1 905 aa26.56■■□□□ 1.84
CLPTM1-201ENST00000337392 TSC1Q92574 1164 aa26.56■■□□□ 1.84
CLPTM1-201ENST00000337392 EIF4ENIF1Q9NRA8 985 aaKnown RBP26.56■■□□□ 1.84
CLPTM1-201ENST00000337392 GTF2IP78347 998 aa26.55■■□□□ 1.84
CLPTM1-201ENST00000337392 SLC35G1Q2M3R5 365 aa26.55■■□□□ 1.84
CLPTM1-201ENST00000337392 PRPF3O43395 683 aaKnown RBP26.55■■□□□ 1.84
CLPTM1-201ENST00000337392 BMP6P22004 513 aa26.55■■□□□ 1.84
CLPTM1-201ENST00000337392 PCDHA5Q9Y5H7 936 aa26.55■■□□□ 1.84
CLPTM1-201ENST00000337392 A0A087X0B3 334 aa26.54■■□□□ 1.84
CLPTM1-201ENST00000337392 ADRA2BP18089 450 aa26.54■■□□□ 1.84
CLPTM1-201ENST00000337392 RBM17Q96I25 401 aaKnown RBP26.54■■□□□ 1.84
CLPTM1-201ENST00000337392 SERTAD1Q9UHV2 236 aa26.54■■□□□ 1.84
CLPTM1-201ENST00000337392 CUTAO60888 179 aa26.54■■□□□ 1.84
CLPTM1-201ENST00000337392 RILPL1Q5EBL4 403 aa26.54■■□□□ 1.84
CLPTM1-201ENST00000337392 MTA3Q9BTC8 594 aa26.54■■□□□ 1.84
CLPTM1-201ENST00000337392 RBM10P98175 930 aaKnown RBP26.53■■□□□ 1.84
CLPTM1-201ENST00000337392 PICALMQ13492 652 aa26.53■■□□□ 1.84
CLPTM1-201ENST00000337392 DOK7Q18PE1 504 aa26.53■■□□□ 1.84
CLPTM1-201ENST00000337392 SBK1Q52WX2 424 aa26.53■■□□□ 1.84
CLPTM1-201ENST00000337392 KRBA2Q6ZNG9 492 aa26.53■■□□□ 1.84
CLPTM1-201ENST00000337392 PNMA1Q8ND90 353 aa26.53■■□□□ 1.84
CLPTM1-201ENST00000337392 KRT2P35908 639 aa26.53■■□□□ 1.84
CLPTM1-201ENST00000337392 TYW1BQ6NUM6 668 aa26.53■■□□□ 1.84
CLPTM1-201ENST00000337392 PIK3AP1Q6ZUJ8 805 aa26.53■■□□□ 1.84
CLPTM1-201ENST00000337392 ZNF219Q9P2Y4 722 aaPredicted RBP26.53■■□□□ 1.84
CLPTM1-201ENST00000337392 PTPREP23469 700 aa26.52■■□□□ 1.84
CLPTM1-201ENST00000337392 NLRP12P59046 1061 aa26.52■■□□□ 1.84
CLPTM1-201ENST00000337392 NCAPHQ15003 741 aa26.52■■□□□ 1.84
CLPTM1-201ENST00000337392 CLEC10AQ8IUN9 316 aa26.52■■□□□ 1.84
CLPTM1-201ENST00000337392 STAMQ92783 540 aa26.52■■□□□ 1.84
CLPTM1-201ENST00000337392 GOLGA6L6A8MZA4 724 aa26.52■■□□□ 1.84
CLPTM1-201ENST00000337392 TSPY3P0CV98 308 aa26.52■■□□□ 1.84
CLPTM1-201ENST00000337392 TSPY8P0CW00 308 aa26.52■■□□□ 1.84
CLPTM1-201ENST00000337392 COL23A1Q86Y22 540 aaPredicted RBP26.52■■□□□ 1.84
CLPTM1-201ENST00000337392 KAT14Q9H8E8 782 aa26.52■■□□□ 1.84
CLPTM1-201ENST00000337392 TEX11Q8IYF3 940 aa26.52■■□□□ 1.84
CLPTM1-201ENST00000337392 KLHL34Q8N239 644 aa26.52■■□□□ 1.84
CLPTM1-201ENST00000337392 SMC2O95347 1197 aa26.51■■□□□ 1.83
CLPTM1-201ENST00000337392 HSD3B7Q9H2F3 369 aa26.51■■□□□ 1.83
CLPTM1-201ENST00000337392 KCNQ5Q9NR82 932 aa26.51■■□□□ 1.83
CLPTM1-201ENST00000337392 IFNKQ9P0W0 207 aa26.51■■□□□ 1.83
CLPTM1-201ENST00000337392 LAMB1P07942 1786 aa26.51■■□□□ 1.83
CLPTM1-201ENST00000337392 DDAH1O94760 285 aa26.51■■□□□ 1.83
CLPTM1-201ENST00000337392 CDC25AP30304 524 aa26.51■■□□□ 1.83
CLPTM1-201ENST00000337392 XPO4Q9C0E2 1151 aaKnown RBP26.51■■□□□ 1.83
CLPTM1-201ENST00000337392 BAG3O95817 575 aa26.5■■□□□ 1.83
CLPTM1-201ENST00000337392 RCAN1P53805 252 aa26.5■■□□□ 1.83
CLPTM1-201ENST00000337392 FAM205AQ6ZU69 1335 aa26.5■■□□□ 1.83
CLPTM1-201ENST00000337392 NLRP5P59047 1200 aa26.5■■□□□ 1.83
CLPTM1-201ENST00000337392 RBM28Q9NW13 759 aaKnown RBP26.5■■□□□ 1.83
CLPTM1-201ENST00000337392 RASA1P20936 1047 aa26.49■■□□□ 1.83
CLPTM1-201ENST00000337392 SCNN1DP51172 638 aa26.49■■□□□ 1.83
CLPTM1-201ENST00000337392 DHX58Q96C10 678 aa26.49■■□□□ 1.83
CLPTM1-201ENST00000337392 NAT10Q9H0A0 1025 aaKnown RBP26.49■■□□□ 1.83
CLPTM1-201ENST00000337392 UQCRHLA0A096LP55 91 aa26.49■■□□□ 1.83
CLPTM1-201ENST00000337392 CYTH3O43739 400 aa26.49■■□□□ 1.83
CLPTM1-201ENST00000337392 UQCRHP07919 91 aa26.49■■□□□ 1.83
CLPTM1-201ENST00000337392 SCG2P13521 617 aa26.49■■□□□ 1.83
CLPTM1-201ENST00000337392 AFMP43652 599 aa26.49■■□□□ 1.83
CLPTM1-201ENST00000337392 EIF6P56537 245 aaKnown RBP26.49■■□□□ 1.83
CLPTM1-201ENST00000337392 NOL10Q9BSC4 688 aaKnown RBP26.49■■□□□ 1.83
CLPTM1-201ENST00000337392 TRIM75PA6NK02 468 aa26.48■■□□□ 1.83
CLPTM1-201ENST00000337392 CAVIN2O95810 425 aa26.48■■□□□ 1.83
CLPTM1-201ENST00000337392 ATP2B4P23634 1241 aa26.48■■□□□ 1.83
CLPTM1-201ENST00000337392 SLC27A3Q5K4L6 730 aa26.48■■□□□ 1.83
CLPTM1-201ENST00000337392 SARM1Q6SZW1 724 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms