RNA–Protein interactions for RNA: ENST00000337273.9

TNPO1-201, Transcript of transportin 1, humanhuman

TSL 1 (best) BASIC

Gene TNPO1, Length 11,183 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-201ENST00000337273 EPC1Q9H2F5 836 aa8.88□□□□□ -0.99
TNPO1-201ENST00000337273 TRAPPC8Q9Y2L5 1435 aa8.88□□□□□ -0.99
TNPO1-201ENST00000337273 KRT9P35527 623 aa8.88□□□□□ -0.99
TNPO1-201ENST00000337273 SEPT14Q6ZU15 432 aa8.88□□□□□ -0.99
TNPO1-201ENST00000337273 VPS16Q9H269 839 aa8.88□□□□□ -0.99
TNPO1-201ENST00000337273 LOC102724159A0A0B4J2E5 919 aa8.88□□□□□ -0.99
TNPO1-201ENST00000337273 RNASELQ05823 741 aaKnown RBP8.88□□□□□ -0.99
TNPO1-201ENST00000337273 ARID5BQ14865 1188 aa8.88□□□□□ -0.99
TNPO1-201ENST00000337273 PWP2Q15269 919 aaKnown RBP8.88□□□□□ -0.99
TNPO1-201ENST00000337273 G3BP2Q9UN86 482 aaKnown RBP8.88□□□□□ -0.99
TNPO1-201ENST00000337273 ABCC1P33527 1531 aa8.88□□□□□ -0.99
TNPO1-201ENST00000337273 TPTE2Q6XPS3 522 aa8.88□□□□□ -0.99
TNPO1-201ENST00000337273 UTP14CQ5TAP6 766 aaKnown RBP8.88□□□□□ -0.99
TNPO1-201ENST00000337273 VTI1AQ96AJ9 217 aa8.88□□□□□ -0.99
TNPO1-201ENST00000337273 ZNF274Q96GC6 653 aaPredicted RBP8.88□□□□□ -0.99
TNPO1-201ENST00000337273 DCAF5Q96JK2 942 aa8.88□□□□□ -0.99
TNPO1-201ENST00000337273 GPATCH8Q9UKJ3 1502 aaKnown RBP8.88□□□□□ -0.99
TNPO1-201ENST00000337273 SHANK2Q9UPX8 1470 aa8.88□□□□□ -0.99
TNPO1-201ENST00000337273 HIP1RO75146 1068 aa8.88□□□□□ -0.99
TNPO1-201ENST00000337273 ATP6V1AP38606 617 aa8.88□□□□□ -0.99
TNPO1-201ENST00000337273 KIF11P52732 1056 aa8.88□□□□□ -0.99
TNPO1-201ENST00000337273 HAUS8Q9BT25 410 aa8.88□□□□□ -0.99
TNPO1-201ENST00000337273 KIF21AQ7Z4S6 1674 aa8.88□□□□□ -0.99
TNPO1-201ENST00000337273 POLR2DO15514 142 aaKnown RBP8.88□□□□□ -0.99
TNPO1-201ENST00000337273 MAGEA1P43355 309 aa8.88□□□□□ -0.99
TNPO1-201ENST00000337273 MAGEB6Q8N7X4 407 aa8.88□□□□□ -0.99
TNPO1-201ENST00000337273 DDX21Q9NR30 783 aaKnown RBP eCLIP8.88□□□□□ -0.99
TNPO1-201ENST00000337273 DNM2P50570 870 aa8.88□□□□□ -0.99
TNPO1-201ENST00000337273 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.88□□□□□ -0.99
TNPO1-201ENST00000337273 ATXN8OSP0DMR3 200 aa8.87□□□□□ -0.99
TNPO1-201ENST00000337273 PARP10Q53GL7 1025 aa8.87□□□□□ -0.99
TNPO1-201ENST00000337273 PPP1R12CQ9BZL4 782 aa8.87□□□□□ -0.99
TNPO1-201ENST00000337273 BRD1O95696 1058 aa8.87□□□□□ -0.99
TNPO1-201ENST00000337273 PKD2L1Q9P0L9 805 aa8.87□□□□□ -0.99
TNPO1-201ENST00000337273 MICAL3Q7RTP6 2002 aa8.87□□□□□ -0.99
TNPO1-201ENST00000337273 KLHL30Q0D2K2 578 aa8.87□□□□□ -0.99
TNPO1-201ENST00000337273 LMBRD1Q9NUN5 540 aa8.87□□□□□ -0.99
TNPO1-201ENST00000337273 BIN2Q9UBW5 565 aaPredicted RBP8.87□□□□□ -0.99
TNPO1-201ENST00000337273 KIFC2Q96AC6 838 aa8.87□□□□□ -0.99
TNPO1-201ENST00000337273 POLKQ9UBT6 870 aa8.87□□□□□ -0.99
TNPO1-201ENST00000337273 HSPA1LP34931 641 aa8.87□□□□□ -0.99
TNPO1-201ENST00000337273 YWHAEP62258 255 aaKnown RBP8.87□□□□□ -0.99
TNPO1-201ENST00000337273 ZBTB17Q13105 803 aa8.87□□□□□ -0.99
TNPO1-201ENST00000337273 GEN1Q17RS7 908 aa8.87□□□□□ -0.99
TNPO1-201ENST00000337273 MYCBPQ99417 103 aaPredicted RBP8.87□□□□□ -0.99
TNPO1-201ENST00000337273 EYA3Q99504 573 aa8.87□□□□□ -0.99
TNPO1-201ENST00000337273 COL17A1Q9UMD9 1497 aaPredicted RBP8.87□□□□□ -0.99
TNPO1-201ENST00000337273 LDHBP07195 334 aaKnown RBP8.87□□□□□ -0.99
TNPO1-201ENST00000337273 STRN3Q13033 797 aa8.87□□□□□ -0.99
TNPO1-201ENST00000337273 CCDC117Q8IWD4 279 aaPredicted RBP8.87□□□□□ -0.99
TNPO1-201ENST00000337273 MAGEF1Q9HAY2 307 aa8.87□□□□□ -0.99
TNPO1-201ENST00000337273 AMFRQ9UKV5 643 aa8.87□□□□□ -0.99
TNPO1-201ENST00000337273 HYOU1Q9Y4L1 999 aa8.87□□□□□ -0.99
TNPO1-201ENST00000337273 GALNT17Q6IS24 598 aa8.87□□□□□ -0.99
TNPO1-201ENST00000337273 FOXO3O43524 673 aa8.87□□□□□ -0.99
TNPO1-201ENST00000337273 PPFIA2O75334 1257 aa8.87□□□□□ -0.99
TNPO1-201ENST00000337273 CRCPO75575 148 aa8.87□□□□□ -0.99
TNPO1-201ENST00000337273 ZNF131P52739 623 aa8.87□□□□□ -0.99
TNPO1-201ENST00000337273 EIF4A2Q14240 407 aaKnown RBP8.87□□□□□ -0.99
TNPO1-201ENST00000337273 EFCAB13Q8IY85 973 aa8.87□□□□□ -0.99
TNPO1-201ENST00000337273 TSPYL6Q8N831 410 aa8.87□□□□□ -0.99
TNPO1-201ENST00000337273 KCNV2Q8TDN2 545 aa8.87□□□□□ -0.99
TNPO1-201ENST00000337273 EPSTI1Q96J88 318 aa8.87□□□□□ -0.99
TNPO1-201ENST00000337273 KIAA1468Q9P260 1216 aa8.87□□□□□ -0.99
TNPO1-201ENST00000337273 MAN1A1P33908 653 aa8.87□□□□□ -0.99
TNPO1-201ENST00000337273 LRRC8AQ8IWT6 810 aa8.87□□□□□ -0.99
TNPO1-201ENST00000337273 HAUS1Q96CS2 278 aa8.87□□□□□ -0.99
TNPO1-201ENST00000337273 SPZ1Q9BXG8 430 aa8.87□□□□□ -0.99
TNPO1-201ENST00000337273 CTNNA1P35221 906 aaKnown RBP8.86□□□□□ -0.99
TNPO1-201ENST00000337273 PPP2R5AQ15172 486 aa8.86□□□□□ -0.99
TNPO1-201ENST00000337273 SFMBT2Q5VUG0 894 aa8.86□□□□□ -0.99
TNPO1-201ENST00000337273 NCAPGQ9BPX3 1015 aa8.86□□□□□ -0.99
TNPO1-201ENST00000337273 MIS12Q9H081 205 aa8.86□□□□□ -0.99
TNPO1-201ENST00000337273 ASIC3Q9UHC3 531 aa8.86□□□□□ -0.99
TNPO1-201ENST00000337273 RIMS2Q9UQ26 1411 aa8.86□□□□□ -0.99
TNPO1-201ENST00000337273 ZNF518AQ6AHZ1 1483 aa8.86□□□□□ -0.99
TNPO1-201ENST00000337273 EIF3CLB5ME19 914 aaKnown RBP8.86□□□□□ -0.99
TNPO1-201ENST00000337273 TFCP2Q12800 502 aa8.86□□□□□ -0.99
TNPO1-201ENST00000337273 GSPT2Q8IYD1 628 aaKnown RBP8.86□□□□□ -0.99
TNPO1-201ENST00000337273 EIF3CQ99613 913 aaKnown RBP8.86□□□□□ -0.99
TNPO1-201ENST00000337273 CAPS2Q9BXY5 557 aa8.86□□□□□ -0.99
TNPO1-201ENST00000337273 RNF14Q9UBS8 474 aa8.86□□□□□ -0.99
TNPO1-201ENST00000337273 NFE2L3Q9Y4A8 694 aa8.86□□□□□ -0.99
TNPO1-201ENST00000337273 CCDC169A6NNP5 214 aa8.86□□□□□ -0.99
TNPO1-201ENST00000337273 PEX26Q7Z412 305 aa8.86□□□□□ -0.99
TNPO1-201ENST00000337273 OR8K1Q8NGG5 319 aa8.86□□□□□ -0.99
TNPO1-201ENST00000337273 MYL10Q9BUA6 226 aa8.86□□□□□ -0.99
TNPO1-201ENST00000337273 CCNT1O60563 726 aaKnown RBP8.86□□□□□ -0.99
TNPO1-201ENST00000337273 TNNI2P48788 182 aa8.86□□□□□ -0.99
TNPO1-201ENST00000337273 SMAD1Q15797 465 aaKnown RBP8.86□□□□□ -0.99
TNPO1-201ENST00000337273 KBTBD3Q8NAB2 608 aa8.86□□□□□ -0.99
TNPO1-201ENST00000337273 PLCH2O75038 1416 aa8.86□□□□□ -0.99
TNPO1-201ENST00000337273 PPP1R12AO14974 1030 aaPredicted RBP8.86□□□□□ -0.99
TNPO1-201ENST00000337273 KRT5P13647 590 aa8.86□□□□□ -0.99
TNPO1-201ENST00000337273 LETM2Q2VYF4 491 aa8.86□□□□□ -0.99
TNPO1-201ENST00000337273 PLBD2Q8NHP8 589 aa8.86□□□□□ -0.99
TNPO1-201ENST00000337273 IFIH1Q9BYX4 1025 aaKnown RBP8.86□□□□□ -0.99
TNPO1-201ENST00000337273 DDX41Q9UJV9 622 aaKnown RBP8.86□□□□□ -0.99
TNPO1-201ENST00000337273 H7C1D1 291 aa8.86□□□□□ -0.99
TNPO1-201ENST00000337273 PCP11498 1178 aaKnown RBP8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms