RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 ANO1Q5XXA6 986 aa10.55□□□□□ -0.72
FNDC3B-201ENST00000336824 FBXO11Q86XK2 927 aa10.55□□□□□ -0.72
FNDC3B-201ENST00000336824 ZNF713Q8N859 430 aaPredicted RBP10.55□□□□□ -0.72
FNDC3B-201ENST00000336824 SH3RF3Q8TEJ3 882 aaPredicted RBP10.55□□□□□ -0.72
FNDC3B-201ENST00000336824 FLOT1O75955 427 aa10.55□□□□□ -0.72
FNDC3B-201ENST00000336824 PPP1R2P41236 205 aa10.55□□□□□ -0.72
FNDC3B-201ENST00000336824 ALX1Q15699 326 aa10.55□□□□□ -0.72
FNDC3B-201ENST00000336824 SPC24Q8NBT2 197 aa10.55□□□□□ -0.72
FNDC3B-201ENST00000336824 BICD1Q96G01 975 aa10.55□□□□□ -0.72
FNDC3B-201ENST00000336824 RTN4Q9NQC3 1192 aaKnown RBP10.55□□□□□ -0.72
FNDC3B-201ENST00000336824 SCG2P13521 617 aa10.55□□□□□ -0.72
FNDC3B-201ENST00000336824 OSBPP22059 807 aa10.55□□□□□ -0.72
FNDC3B-201ENST00000336824 SMIM5Q71RC9 77 aa10.55□□□□□ -0.72
FNDC3B-201ENST00000336824 FERMT2Q96AC1 680 aa10.55□□□□□ -0.72
FNDC3B-201ENST00000336824 PSMA7O14818 248 aa10.55□□□□□ -0.72
FNDC3B-201ENST00000336824 BACH1O14867 736 aa10.55□□□□□ -0.72
FNDC3B-201ENST00000336824 NOM1Q5C9Z4 860 aaKnown RBP10.55□□□□□ -0.72
FNDC3B-201ENST00000336824 CCDC174Q6PII3 467 aa10.55□□□□□ -0.72
FNDC3B-201ENST00000336824 VPS36Q86VN1 386 aa10.55□□□□□ -0.72
FNDC3B-201ENST00000336824 RNF26Q9BY78 433 aaPredicted RBP10.55□□□□□ -0.72
FNDC3B-201ENST00000336824 USP25Q9UHP3 1055 aa10.55□□□□□ -0.72
FNDC3B-201ENST00000336824 WDR19Q8NEZ3 1342 aa10.55□□□□□ -0.72
FNDC3B-201ENST00000336824 SMCO2A6NFE2 343 aa10.54□□□□□ -0.72
FNDC3B-201ENST00000336824 CDK8P49336 464 aa10.54□□□□□ -0.72
FNDC3B-201ENST00000336824 CALCRLQ16602 461 aa10.54□□□□□ -0.72
FNDC3B-201ENST00000336824 FRMPD2Q68DX3 1309 aaPredicted RBP10.54□□□□□ -0.72
FNDC3B-201ENST00000336824 CFBP00751 764 aa10.54□□□□□ -0.72
FNDC3B-201ENST00000336824 LIFRP42702 1097 aa10.54□□□□□ -0.72
FNDC3B-201ENST00000336824 ASIC1P78348 528 aa10.54□□□□□ -0.72
FNDC3B-201ENST00000336824 ARHGEF6Q15052 776 aa10.54□□□□□ -0.72
FNDC3B-201ENST00000336824 VTI1AQ96AJ9 217 aa10.54□□□□□ -0.72
FNDC3B-201ENST00000336824 PSTPIP2Q9H939 334 aa10.54□□□□□ -0.72
FNDC3B-201ENST00000336824 PNPLA7Q6ZV29 1317 aa10.54□□□□□ -0.72
FNDC3B-201ENST00000336824 STAT2P52630 851 aa10.54□□□□□ -0.72
FNDC3B-201ENST00000336824 CCNA1P78396 465 aa10.54□□□□□ -0.72
FNDC3B-201ENST00000336824 KIF22Q14807 665 aa10.54□□□□□ -0.72
FNDC3B-201ENST00000336824 KRT40Q6A162 431 aa10.54□□□□□ -0.72
FNDC3B-201ENST00000336824 FAM13AO94988 1023 aa10.54□□□□□ -0.72
FNDC3B-201ENST00000336824 GNPTABQ3T906 1256 aa10.54□□□□□ -0.72
FNDC3B-201ENST00000336824 VWA3AA6NCI4 1184 aa10.54□□□□□ -0.72
FNDC3B-201ENST00000336824 PRKAB2O43741 272 aa10.54□□□□□ -0.72
FNDC3B-201ENST00000336824 CUTAO60888 179 aa10.54□□□□□ -0.72
FNDC3B-201ENST00000336824 AFMP43652 599 aa10.54□□□□□ -0.72
FNDC3B-201ENST00000336824 MTIF2P46199 727 aaKnown RBP10.54□□□□□ -0.72
FNDC3B-201ENST00000336824 JAKMIP3Q5VZ66 844 aa10.54□□□□□ -0.72
FNDC3B-201ENST00000336824 APBB1IPQ7Z5R6 666 aaPredicted RBP10.54□□□□□ -0.72
FNDC3B-201ENST00000336824 NOP56O00567 594 aaKnown RBP10.54□□□□□ -0.72
FNDC3B-201ENST00000336824 RPS12P25398 132 aaKnown RBP10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 PDIA3P30101 505 aaKnown RBP10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 ZNF174Q15697 407 aa10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 CCDC40Q4G0X9 1142 aa10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 CACNA2D4Q7Z3S7 1137 aa10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 MTA3Q9BTC8 594 aa10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 VPS54Q9P1Q0 977 aa10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 HERC5Q9UII4 1024 aaKnown RBP10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 MRC1P22897 1456 aa10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 GCOM1H8Y6P7 765 aaPredicted RBP10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 POLR2MP0CAP2 368 aa10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 DHX58Q96C10 678 aa10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 STRCQ7RTU9 1775 aa10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 SNAP23O00161 211 aa10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 APOA5Q6Q788 366 aa10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 CCDC65Q8IXS2 484 aa10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 CTAGE1Q96RT6 745 aa10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 AMNQ9BXJ7 453 aa10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 BICDL2A1A5D9 508 aa10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 ZNF165P49910 485 aa10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 NLRX1Q86UT6 975 aa10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 BLIDQ8IZY5 108 aa10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 TRPM3Q9HCF6 1732 aaPredicted RBP10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 PNMA3Q9UL41 463 aa10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 TPCN1Q9ULQ1 816 aa10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 FOSP01100 380 aaPredicted RBP10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 NECTIN1Q15223 517 aa10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 NSMFQ6X4W1 530 aa10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 TRMT1LQ7Z2T5 733 aaKnown RBP10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 FAM160B2Q86V87 743 aa10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 ZNF341Q9BYN7 854 aa10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 BMP3P12645 472 aa10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 SV2BQ7L1I2 683 aa10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 KRT26Q7Z3Y9 468 aa10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 GOLGA6L1Q8N7Z2 621 aa10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 MYCLP12524 364 aaPredicted RBP10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 PRKCSHP14314 528 aaPredicted RBP10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 TRIM47Q96LD4 638 aa10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 DACT1Q9NYF0 836 aa10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 BIN2Q9UBW5 565 aaPredicted RBP10.53□□□□□ -0.72
FNDC3B-201ENST00000336824 TMEM232C9JQI7 657 aa10.52□□□□□ -0.72
FNDC3B-201ENST00000336824 BIN1O00499 593 aa10.52□□□□□ -0.72
FNDC3B-201ENST00000336824 SPAG1Q07617 926 aa10.52□□□□□ -0.72
FNDC3B-201ENST00000336824 ARHGEF16Q5VV41 709 aa10.52□□□□□ -0.72
FNDC3B-201ENST00000336824 FBXO33Q7Z6M2 555 aa10.52□□□□□ -0.72
FNDC3B-201ENST00000336824 HOMER2Q9NSB8 354 aa10.52□□□□□ -0.72
FNDC3B-201ENST00000336824 NHSL1Q5SYE7 1610 aa10.52□□□□□ -0.72
FNDC3B-201ENST00000336824 SH2B2O14492 632 aaPredicted RBP10.52□□□□□ -0.73
FNDC3B-201ENST00000336824 PDE4CQ08493 712 aa10.52□□□□□ -0.73
FNDC3B-201ENST00000336824 DGKHQ86XP1 1220 aa10.52□□□□□ -0.73
FNDC3B-201ENST00000336824 GPHNQ9NQX3 736 aaPredicted RBP10.52□□□□□ -0.73
FNDC3B-201ENST00000336824 ZSWIM5Q9P217 1185 aa10.52□□□□□ -0.73
FNDC3B-201ENST00000336824 CCPG1Q9ULG6 757 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms