RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 DDX60Q8IY21 1712 aaKnown RBP15.85■□□□□ 0.13
SF1-202ENST00000334944 PNPLA7Q6ZV29 1317 aa15.85■□□□□ 0.13
SF1-202ENST00000334944 PLEKHA8P1O95397 391 aa15.85■□□□□ 0.13
SF1-202ENST00000334944 IFNAR1P17181 557 aa15.85■□□□□ 0.13
SF1-202ENST00000334944 NOM1Q5C9Z4 860 aaKnown RBP15.85■□□□□ 0.13
SF1-202ENST00000334944 USP49Q70CQ1 688 aa15.85■□□□□ 0.13
SF1-202ENST00000334944 SHISA4Q96DD7 197 aa15.85■□□□□ 0.13
SF1-202ENST00000334944 CABP5Q9NP86 173 aa15.85■□□□□ 0.13
SF1-202ENST00000334944 GNL3LQ9NVN8 582 aaKnown RBP15.85■□□□□ 0.13
SF1-202ENST00000334944 ARGLU1Q9NWB6 273 aaPredicted RBP15.85■□□□□ 0.13
SF1-202ENST00000334944 LRP5O75197 1615 aa15.85■□□□□ 0.13
SF1-202ENST00000334944 GNAT2P19087 354 aa15.84■□□□□ 0.13
SF1-202ENST00000334944 FAM193AP78312 1265 aa15.84■□□□□ 0.13
SF1-202ENST00000334944 CRACR2BQ8N4Y2 399 aaPredicted RBP15.84■□□□□ 0.13
SF1-202ENST00000334944 ENAHQ8N8S7 591 aaPredicted RBP15.84■□□□□ 0.13
SF1-202ENST00000334944 L2HGDHQ9H9P8 463 aa15.84■□□□□ 0.13
SF1-202ENST00000334944 ADAM21Q9UKJ8 722 aa15.84■□□□□ 0.13
SF1-202ENST00000334944 CAVIN2O95810 425 aa15.84■□□□□ 0.13
SF1-202ENST00000334944 MMP1P03956 469 aa15.84■□□□□ 0.13
SF1-202ENST00000334944 ZNF827Q17R98 1081 aa15.84■□□□□ 0.13
SF1-202ENST00000334944 FOXP4Q8IVH2 680 aaPredicted RBP15.84■□□□□ 0.13
SF1-202ENST00000334944 SMARCC1Q92922 1105 aaPredicted RBP15.84■□□□□ 0.13
SF1-202ENST00000334944 BSDC1Q9NW68 430 aaPredicted RBP15.84■□□□□ 0.13
SF1-202ENST00000334944 RNF216Q9NWF9 866 aaPredicted RBP15.84■□□□□ 0.13
SF1-202ENST00000334944 NBPF11Q86T75 865 aa15.83■□□□□ 0.13
SF1-202ENST00000334944 ZSWIM4Q9H7M6 989 aa15.83■□□□□ 0.13
SF1-202ENST00000334944 YY1AP1Q9H869 796 aa15.83■□□□□ 0.13
SF1-202ENST00000334944 BAZ2AQ9UIF9 1905 aaKnown RBP15.83■□□□□ 0.13
SF1-202ENST00000334944 H3BQF6 201 aa15.83■□□□□ 0.12
SF1-202ENST00000334944 FANCGO15287 622 aa15.83■□□□□ 0.12
SF1-202ENST00000334944 RPS8P62241 208 aaKnown RBP15.83■□□□□ 0.12
SF1-202ENST00000334944 MECOMQ03112 1051 aa15.83■□□□□ 0.12
SF1-202ENST00000334944 GOLGA8FQ08AF8 430 aa15.83■□□□□ 0.12
SF1-202ENST00000334944 GOLGA8DPQ0D2H9 430 aa15.83■□□□□ 0.12
SF1-202ENST00000334944 SAFBQ15424 915 aaKnown RBP eCLIP15.83■□□□□ 0.12
SF1-202ENST00000334944 CCDC93Q567U6 631 aa15.83■□□□□ 0.12
SF1-202ENST00000334944 EARS2Q5JPH6 523 aaKnown RBP15.83■□□□□ 0.12
SF1-202ENST00000334944 TMC6Q7Z403 805 aa15.83■□□□□ 0.12
SF1-202ENST00000334944 SETDB2Q96T68 719 aa15.83■□□□□ 0.12
SF1-202ENST00000334944 KCNH3Q9ULD8 1083 aa15.83■□□□□ 0.12
SF1-202ENST00000334944 V9GY48 417 aaPredicted RBP15.83■□□□□ 0.12
SF1-202ENST00000334944 SARM1Q6SZW1 724 aa15.83■□□□□ 0.12
SF1-202ENST00000334944 METTL16Q86W50 562 aaKnown RBP15.83■□□□□ 0.12
SF1-202ENST00000334944 CNNM3Q8NE01 707 aa15.83■□□□□ 0.12
SF1-202ENST00000334944 ESR2Q92731 530 aa15.83■□□□□ 0.12
SF1-202ENST00000334944 MRFAP1L1Q96HT8 127 aa15.83■□□□□ 0.12
SF1-202ENST00000334944 ZNF804BA4D1E1 1349 aa15.82■□□□□ 0.12
SF1-202ENST00000334944 CT47A1Q5JQC4 288 aaPredicted RBP15.82■□□□□ 0.12
SF1-202ENST00000334944 MYH2Q9UKX2 1941 aa15.82■□□□□ 0.12
SF1-202ENST00000334944 WNT7AO00755 349 aa15.82■□□□□ 0.12
SF1-202ENST00000334944 NLRP12P59046 1061 aa15.82■□□□□ 0.12
SF1-202ENST00000334944 TTC31Q49AM3 519 aaPredicted RBP15.82■□□□□ 0.12
SF1-202ENST00000334944 MYCBPQ99417 103 aaPredicted RBP15.82■□□□□ 0.12
SF1-202ENST00000334944 RNF41Q9H4P4 317 aaPredicted RBP15.82■□□□□ 0.12
SF1-202ENST00000334944 CWC15Q9P013 229 aaKnown RBP15.82■□□□□ 0.12
SF1-202ENST00000334944 PCDHA5Q9Y5H7 936 aa15.82■□□□□ 0.12
SF1-202ENST00000334944 BCL9LQ86UU0 1499 aa15.82■□□□□ 0.12
SF1-202ENST00000334944 ZPR1O75312 459 aa15.81■□□□□ 0.12
SF1-202ENST00000334944 VEGFAP15692 232 aaPredicted RBP15.81■□□□□ 0.12
SF1-202ENST00000334944 UBE4AQ14139 1066 aa15.81■□□□□ 0.12
SF1-202ENST00000334944 NCAPHQ15003 741 aa15.81■□□□□ 0.12
SF1-202ENST00000334944 SF3B3Q15393 1217 aaKnown RBP15.81■□□□□ 0.12
SF1-202ENST00000334944 IFIT1BQ5T764 474 aaKnown RBP15.81■□□□□ 0.12
SF1-202ENST00000334944 CTR9Q6PD62 1173 aa15.81■□□□□ 0.12
SF1-202ENST00000334944 JMYQ8N9B5 988 aa15.81■□□□□ 0.12
SF1-202ENST00000334944 NLRP3Q96P20 1036 aa15.81■□□□□ 0.12
SF1-202ENST00000334944 PHLPP1O60346 1717 aa15.81■□□□□ 0.12
SF1-202ENST00000334944 POLR2DO15514 142 aaKnown RBP15.81■□□□□ 0.12
SF1-202ENST00000334944 GUCY2CP25092 1073 aa15.81■□□□□ 0.12
SF1-202ENST00000334944 SEC23AQ15436 765 aa15.81■□□□□ 0.12
SF1-202ENST00000334944 CLEC4GQ6UXB4 293 aa15.81■□□□□ 0.12
SF1-202ENST00000334944 BARGINQ6ZT62 677 aa15.81■□□□□ 0.12
SF1-202ENST00000334944 DPF2Q92785 391 aa15.81■□□□□ 0.12
SF1-202ENST00000334944 ZSCAN10Q96SZ4 725 aaPredicted RBP15.81■□□□□ 0.12
SF1-202ENST00000334944 NCAPGQ9BPX3 1015 aa15.81■□□□□ 0.12
SF1-202ENST00000334944 HPSEQ9Y251 543 aa15.81■□□□□ 0.12
SF1-202ENST00000334944 CASP1P29466 404 aa15.81■□□□□ 0.12
SF1-202ENST00000334944 RESP18Q5W5W9 173 aa15.81■□□□□ 0.12
SF1-202ENST00000334944 ARMCX5Q6P1M9 558 aa15.81■□□□□ 0.12
SF1-202ENST00000334944 KRI1Q8N9T8 703 aaKnown RBP15.81■□□□□ 0.12
SF1-202ENST00000334944 VPS18Q9P253 973 aa15.81■□□□□ 0.12
SF1-202ENST00000334944 CHD4Q14839 1912 aa15.8■□□□□ 0.12
SF1-202ENST00000334944 CICQ96RK0 1608 aaPredicted RBP15.8■□□□□ 0.12
SF1-202ENST00000334944 PPP6R2O75170 966 aa15.8■□□□□ 0.12
SF1-202ENST00000334944 AKAP17AQ02040 695 aaKnown RBP15.8■□□□□ 0.12
SF1-202ENST00000334944 PDE4BQ07343 736 aa15.8■□□□□ 0.12
SF1-202ENST00000334944 KCNG1Q9UIX4 513 aa15.8■□□□□ 0.12
SF1-202ENST00000334944 AHDC1Q5TGY3 1603 aaPredicted RBP15.8■□□□□ 0.12
SF1-202ENST00000334944 NEMFO60524 1076 aa15.8■□□□□ 0.12
SF1-202ENST00000334944 DEXIO95424 95 aa15.8■□□□□ 0.12
SF1-202ENST00000334944 BMP6P22004 513 aa15.8■□□□□ 0.12
SF1-202ENST00000334944 CDC25BP30305 580 aa15.8■□□□□ 0.12
SF1-202ENST00000334944 CC2D1AQ6P1N0 951 aaPredicted RBP15.8■□□□□ 0.12
SF1-202ENST00000334944 GOLGA5Q8TBA6 731 aa15.8■□□□□ 0.12
SF1-202ENST00000334944 NSUN4Q96CB9 384 aaKnown RBP15.8■□□□□ 0.12
SF1-202ENST00000334944 CCNL1Q9UK58 526 aaPredicted RBP15.8■□□□□ 0.12
SF1-202ENST00000334944 RTL9Q8NET4 1388 aa15.79■□□□□ 0.12
SF1-202ENST00000334944 ADAMTS3O15072 1205 aa15.79■□□□□ 0.12
SF1-202ENST00000334944 PHACTR2O75167 634 aa15.79■□□□□ 0.12
SF1-202ENST00000334944 HIBADHP31937 336 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms