RNA–Protein interactions for RNA: ENST00000334536.12

SPNS1-203, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 2,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-203ENST00000334536 RASGRF1Q13972 1273 aa23.4■■□□□ 1.34
SPNS1-203ENST00000334536 LRCH2Q5VUJ6 765 aa23.4■■□□□ 1.34
SPNS1-203ENST00000334536 RESP18Q5W5W9 173 aa23.4■■□□□ 1.34
SPNS1-203ENST00000334536 HELBQ8NG08 1087 aaPredicted RBP23.4■■□□□ 1.34
SPNS1-203ENST00000334536 NACAP1Q9BZK3 213 aa23.4■■□□□ 1.34
SPNS1-203ENST00000334536 SENP2Q9HC62 589 aa23.4■■□□□ 1.34
SPNS1-203ENST00000334536 RAB21Q9UL25 225 aa23.4■■□□□ 1.34
SPNS1-203ENST00000334536 MROH7-TTC4A0A0A0MT08 1334 aa23.4■■□□□ 1.34
SPNS1-203ENST00000334536 IFNAR1P17181 557 aa23.4■■□□□ 1.34
SPNS1-203ENST00000334536 MARCKSP29966 332 aaPredicted RBP23.4■■□□□ 1.34
SPNS1-203ENST00000334536 SETQ01105 290 aaPredicted RBP23.4■■□□□ 1.34
SPNS1-203ENST00000334536 PARP10Q53GL7 1025 aa23.4■■□□□ 1.34
SPNS1-203ENST00000334536 ELOA2Q8IYF1 753 aaPredicted RBP23.4■■□□□ 1.34
SPNS1-203ENST00000334536 PHKBQ93100 1093 aa23.4■■□□□ 1.34
SPNS1-203ENST00000334536 ZSWIM5Q9P217 1185 aa23.4■■□□□ 1.34
SPNS1-203ENST00000334536 RANBP6O60518 1105 aaKnown RBP23.39■■□□□ 1.34
SPNS1-203ENST00000334536 FOXR1Q6PIV2 292 aa23.39■■□□□ 1.34
SPNS1-203ENST00000334536 POTEDQ86YR6 584 aa23.39■■□□□ 1.34
SPNS1-203ENST00000334536 GSG1L2A8MUP6 293 aa23.38■■□□□ 1.33
SPNS1-203ENST00000334536 MYO1BO43795 1136 aa23.38■■□□□ 1.33
SPNS1-203ENST00000334536 RCAN1P53805 252 aa23.38■■□□□ 1.33
SPNS1-203ENST00000334536 NCAPHQ15003 741 aa23.38■■□□□ 1.33
SPNS1-203ENST00000334536 SUSD4Q5VX71 490 aa23.38■■□□□ 1.33
SPNS1-203ENST00000334536 SHC4Q6S5L8 630 aa23.38■■□□□ 1.33
SPNS1-203ENST00000334536 MFSD6Q6ZSS7 791 aa23.38■■□□□ 1.33
SPNS1-203ENST00000334536 FBXW7Q969H0 707 aa23.38■■□□□ 1.33
SPNS1-203ENST00000334536 GBP3Q9H0R5 595 aa23.38■■□□□ 1.33
SPNS1-203ENST00000334536 PDE11AQ9HCR9 933 aa23.38■■□□□ 1.33
SPNS1-203ENST00000334536 RXRAP19793 462 aa23.38■■□□□ 1.33
SPNS1-203ENST00000334536 MNAT1P51948 309 aa23.38■■□□□ 1.33
SPNS1-203ENST00000334536 MAP2K1Q02750 393 aaPredicted RBP23.38■■□□□ 1.33
SPNS1-203ENST00000334536 HSP90B2PQ58FF3 399 aa23.38■■□□□ 1.33
SPNS1-203ENST00000334536 BEND6Q5SZJ8 279 aaPredicted RBP23.38■■□□□ 1.33
SPNS1-203ENST00000334536 TMTC2Q8N394 836 aa23.38■■□□□ 1.33
SPNS1-203ENST00000334536 MICALL1Q8N3F8 863 aa23.38■■□□□ 1.33
SPNS1-203ENST00000334536 CCDC152Q4G0S7 254 aa23.37■■□□□ 1.33
SPNS1-203ENST00000334536 SYTL4Q96C24 671 aaPredicted RBP23.37■■□□□ 1.33
SPNS1-203ENST00000334536 XPO4Q9C0E2 1151 aaKnown RBP23.37■■□□□ 1.33
SPNS1-203ENST00000334536 ARMT1Q9H993 441 aa23.37■■□□□ 1.33
SPNS1-203ENST00000334536 CCDC87Q9NVE4 849 aa23.37■■□□□ 1.33
SPNS1-203ENST00000334536 IFNKQ9P0W0 207 aa23.37■■□□□ 1.33
SPNS1-203ENST00000334536 SLIT2O94813 1529 aa23.37■■□□□ 1.33
SPNS1-203ENST00000334536 UBAP1LF5GYI3 381 aa23.37■■□□□ 1.33
SPNS1-203ENST00000334536 ERCC3P19447 782 aa23.37■■□□□ 1.33
SPNS1-203ENST00000334536 CTDSPL2Q05D32 466 aa23.37■■□□□ 1.33
SPNS1-203ENST00000334536 TMC6Q7Z403 805 aa23.37■■□□□ 1.33
SPNS1-203ENST00000334536 CDCA7Q9BWT1 371 aaPredicted RBP23.37■■□□□ 1.33
SPNS1-203ENST00000334536 SLC26A6Q9BXS9 759 aa23.37■■□□□ 1.33
SPNS1-203ENST00000334536 BIN1O00499 593 aa23.36■■□□□ 1.33
SPNS1-203ENST00000334536 SAFBQ15424 915 aaKnown RBP eCLIP23.36■■□□□ 1.33
SPNS1-203ENST00000334536 C11orf91Q3C1V1 193 aa23.36■■□□□ 1.33
SPNS1-203ENST00000334536 CNKSR2Q8WXI2 1034 aa23.36■■□□□ 1.33
SPNS1-203ENST00000334536 RNF41Q9H4P4 317 aaPredicted RBP23.36■■□□□ 1.33
SPNS1-203ENST00000334536 ECM29Q5VYK3 1845 aa23.36■■□□□ 1.33
SPNS1-203ENST00000334536 HNRNPH1P31943 449 aaKnown RBP23.35■■□□□ 1.33
SPNS1-203ENST00000334536 IGHMBP2P38935 993 aaKnown RBP23.35■■□□□ 1.33
SPNS1-203ENST00000334536 TUBB2AQ13885 445 aa23.35■■□□□ 1.33
SPNS1-203ENST00000334536 INTS5Q6P9B9 1019 aaKnown RBP23.35■■□□□ 1.33
SPNS1-203ENST00000334536 TRIM22Q8IYM9 498 aa23.35■■□□□ 1.33
SPNS1-203ENST00000334536 MSANTD4Q8NCY6 345 aa23.35■■□□□ 1.33
SPNS1-203ENST00000334536 TUBB2BQ9BVA1 445 aa23.35■■□□□ 1.33
SPNS1-203ENST00000334536 ATXN2Q99700 1313 aaKnown RBP23.35■■□□□ 1.33
SPNS1-203ENST00000334536 DDR1Q08345 913 aa23.35■■□□□ 1.33
SPNS1-203ENST00000334536 NOSTRINQ8IVI9 506 aa23.35■■□□□ 1.33
SPNS1-203ENST00000334536 FAN1Q9Y2M0 1017 aa23.35■■□□□ 1.33
SPNS1-203ENST00000334536 CHD4Q14839 1912 aa23.35■■□□□ 1.33
SPNS1-203ENST00000334536 CBFA2T2O43439 604 aa23.34■■□□□ 1.33
SPNS1-203ENST00000334536 RTN1Q16799 776 aa23.34■■□□□ 1.33
SPNS1-203ENST00000334536 KRI1Q8N9T8 703 aaKnown RBP23.34■■□□□ 1.33
SPNS1-203ENST00000334536 CNNM3Q8NE01 707 aa23.34■■□□□ 1.33
SPNS1-203ENST00000334536 TACC3Q9Y6A5 838 aa23.34■■□□□ 1.33
SPNS1-203ENST00000334536 SLC4A4Q9Y6R1 1079 aa23.34■■□□□ 1.33
SPNS1-203ENST00000334536 TMCO5BA8MYB1 307 aa23.33■■□□□ 1.33
SPNS1-203ENST00000334536 MMP1P03956 469 aa23.33■■□□□ 1.33
SPNS1-203ENST00000334536 FANCCQ00597 558 aa23.33■■□□□ 1.33
SPNS1-203ENST00000334536 WTAPQ15007 396 aa23.33■■□□□ 1.33
SPNS1-203ENST00000334536 MYL10Q9BUA6 226 aa23.33■■□□□ 1.33
SPNS1-203ENST00000334536 FOXP1Q9H334 677 aaPredicted RBP23.33■■□□□ 1.33
SPNS1-203ENST00000334536 INCENPQ9NQS7 918 aa23.33■■□□□ 1.33
SPNS1-203ENST00000334536 GNL3LQ9NVN8 582 aaKnown RBP23.33■■□□□ 1.33
SPNS1-203ENST00000334536 HOOK1Q9UJC3 728 aaKnown RBP23.33■■□□□ 1.33
SPNS1-203ENST00000334536 L1RE1Q9UN81 338 aa23.33■■□□□ 1.33
SPNS1-203ENST00000334536 ERICH2A1L162 156 aa23.33■■□□□ 1.32
SPNS1-203ENST00000334536 MYL5Q02045 173 aa23.33■■□□□ 1.32
SPNS1-203ENST00000334536 SEC31BQ9NQW1 1179 aa23.33■■□□□ 1.32
SPNS1-203ENST00000334536 WNK3Q9BYP7 1800 aa23.33■■□□□ 1.32
SPNS1-203ENST00000334536 FANCGO15287 622 aa23.32■■□□□ 1.32
SPNS1-203ENST00000334536 CAMTA2O94983 1202 aa23.32■■□□□ 1.32
SPNS1-203ENST00000334536 OLFM4Q6UX06 510 aa23.32■■□□□ 1.32
SPNS1-203ENST00000334536 LCORLQ8N3X6 602 aa23.32■■□□□ 1.32
SPNS1-203ENST00000334536 GIMAP7Q8NHV1 300 aa23.32■■□□□ 1.32
SPNS1-203ENST00000334536 KCNH3Q9ULD8 1083 aa23.32■■□□□ 1.32
SPNS1-203ENST00000334536 DEXIO95424 95 aa23.32■■□□□ 1.32
SPNS1-203ENST00000334536 PPP2R5BQ15173 497 aa23.32■■□□□ 1.32
SPNS1-203ENST00000334536 GBP6Q6ZN66 633 aa23.32■■□□□ 1.32
SPNS1-203ENST00000334536 VIPAS39Q9H9C1 493 aa23.32■■□□□ 1.32
SPNS1-203ENST00000334536 BCORQ6W2J9 1755 aa23.31■■□□□ 1.32
SPNS1-203ENST00000334536 RREB1Q92766 1687 aa23.31■■□□□ 1.32
SPNS1-203ENST00000334536 ARHGAP6O43182 974 aa23.31■■□□□ 1.32
SPNS1-203ENST00000334536 BCAMP50895 628 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms