RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 KRT38O76015 456 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 ITGB3BPQ13352 177 aaPredicted RBP6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 DDI2Q5TDH0 399 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 PHF23Q9BUL5 403 aaPredicted RBP6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 EPS15L1Q9UBC2 864 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 DNAJA1P31689 397 aaKnown RBP6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 CEBPGP53567 150 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 PSME1Q06323 249 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 FRA10AC1Q70Z53 315 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 GET4Q7L5D6 327 aaPredicted RBP6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 PRR23AA6NEV1 266 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 WDR46O15213 610 aaKnown RBP6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 PYGMP11217 842 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 CYLC2Q14093 348 aaPredicted RBP6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 MICALL2Q8IY33 904 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 CNTROBQ8N137 903 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 IFNKQ9P0W0 207 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 FIBPO43427 364 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 GRK2P25098 689 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 KARSQ15046 597 aaKnown RBP6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 TAF12Q16514 161 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 KRT74Q7RTS7 529 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 USHBP1Q8N6Y0 703 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 CXorf56Q9H5V9 222 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 KCTD21Q4G0X4 260 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 KSR2Q6VAB6 950 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 CHERPQ8IWX8 916 aaKnown RBP6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 TRMT44Q8IYL2 757 aaKnown RBP6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 VMP1Q96GC9 406 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 CNDP1Q96KN2 507 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 ZC3H11AO75152 810 aaKnown RBP eCLIP6.7□□□□□ -1.344e-6■■□□□ 14.4
CDC42BPA-201ENST00000334218 DNAJC3Q13217 504 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 ARL2BPQ9Y2Y0 163 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 CAB39Q9Y376 341 aaPredicted RBP6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 WDR33Q9C0J8 1336 aaKnown RBP6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 DEAF1O75398 565 aaPredicted RBP6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 BFSP1Q12934 665 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 DENND6AQ8IWF6 608 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 TRIM22Q8IYM9 498 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 PDCD10Q9BUL8 212 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 LNPKQ9C0E8 428 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 SEL1LQ9UBV2 794 aa6.7□□□□□ -1.34
CDC42BPA-201ENST00000334218 NINQ8N4C6 2090 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 DUSP27Q5VZP5 1158 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 PPP4R3CPQ6ZMV5 832 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 CCDC78A2IDD5 438 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 E7ENQ6 273 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 PPP6R3Q5H9R7 873 aaPredicted RBP6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 SPATA1Q5VX52 437 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 WDR60Q8WVS4 1066 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 NUP62CLQ9H1M0 184 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 NDUFA13Q9P0J0 144 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 PCSK1NQ9UHG2 260 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 CASKIN1Q8WXD9 1431 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 APOA4P06727 396 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 EEF1DP29692 281 aaKnown RBP6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 GARSP41250 739 aaKnown RBP6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 CARSP49589 748 aaKnown RBP6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 CDR2LQ86X02 465 aaPredicted RBP6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 CEP19Q96LK0 163 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 MORC2Q9Y6X9 1032 aaPredicted RBP6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 DENND4BO75064 1496 aaPredicted RBP6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 ARHGAP5Q13017 1502 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 ZNF638Q14966 1978 aaKnown RBP6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 HSPA9P38646 679 aaKnown RBP6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 SLC20A2Q08357 652 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 PEX5P50542 639 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 DEFA1P59665 94 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 DEFA3P59666 94 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 LAMB3Q13751 1172 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 PRR23CQ6ZRP0 262 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 TSPAN18Q96SJ8 248 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 CCDC28BQ9BUN5 200 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 PDE9AO76083 593 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 TBCCQ15814 346 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 ANKRD20A3Q5VUR7 823 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 RGS22Q8NE09 1264 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 CFAP61Q8NHU2 1237 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 ITFG2Q969R8 447 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 DACT3Q96B18 629 aaPredicted RBP6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 SELENOOQ9BVL4 669 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 ANO10Q9NW15 660 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 RASGRF1Q13972 1273 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 ELMSAN1Q6PJG2 1045 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 S100PBPQ96BU1 408 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 LZTS1Q9Y250 596 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 WDR62O43379 1518 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 PRXQ9BXM0 1461 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 MX2P20592 715 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 AMPHP49418 695 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 C8orf74Q6P047 294 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 NUDT16L1Q9BRJ7 211 aaKnown RBP6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 STOML2Q9UJZ1 356 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 ITM2BQ9Y287 266 aa6.69□□□□□ -1.34
CDC42BPA-201ENST00000334218 GOLGA8FQ08AF8 430 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 GOLGA8DPQ0D2H9 430 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 SLC12A1Q13621 1099 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 ACAP2Q15057 778 aa6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 ZNF530Q6P9A1 599 aaPredicted RBP6.68□□□□□ -1.34
CDC42BPA-201ENST00000334218 OLFML1Q6UWY5 402 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms