RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 POLR2DO15514 142 aaKnown RBP13.37□□□□□ -0.27
LIMK2-202ENST00000333611 ANTXR2P58335 489 aa13.37□□□□□ -0.27
LIMK2-202ENST00000333611 NBPF14Q5TI25 921 aa13.37□□□□□ -0.27
LIMK2-202ENST00000333611 NBPF10Q6P3W6 841 aaKnown RBP13.37□□□□□ -0.27
LIMK2-202ENST00000333611 NBPF15Q8N660 670 aa13.37□□□□□ -0.27
LIMK2-202ENST00000333611 CDC5LQ99459 802 aaKnown RBP13.37□□□□□ -0.27
LIMK2-202ENST00000333611 BAIAP2L1Q9UHR4 511 aa13.37□□□□□ -0.27
LIMK2-202ENST00000333611 CASP1P29466 404 aa13.36□□□□□ -0.27
LIMK2-202ENST00000333611 DNA2P51530 1060 aa13.36□□□□□ -0.27
LIMK2-202ENST00000333611 PDE4BQ07343 736 aa13.36□□□□□ -0.27
LIMK2-202ENST00000333611 TACO1Q9BSH4 297 aaKnown RBP13.36□□□□□ -0.27
LIMK2-202ENST00000333611 HPS5Q9UPZ3 1129 aa13.36□□□□□ -0.27
LIMK2-202ENST00000333611 ENC1O14682 589 aa13.36□□□□□ -0.27
LIMK2-202ENST00000333611 CHUKO15111 745 aa13.36□□□□□ -0.27
LIMK2-202ENST00000333611 ZBTB43O43298 467 aa13.36□□□□□ -0.27
LIMK2-202ENST00000333611 GGCXP38435 758 aa13.36□□□□□ -0.27
LIMK2-202ENST00000333611 CTDSPL2Q05D32 466 aa13.36□□□□□ -0.27
LIMK2-202ENST00000333611 RABL6Q3YEC7 729 aaPredicted RBP13.36□□□□□ -0.27
LIMK2-202ENST00000333611 LDHAL6AQ6ZMR3 332 aa13.36□□□□□ -0.27
LIMK2-202ENST00000333611 ANKARQ7Z5J8 1434 aa13.36□□□□□ -0.27
LIMK2-202ENST00000333611 A0A0U1RQJ8 604 aa13.36□□□□□ -0.27
LIMK2-202ENST00000333611 CTAGE9A4FU28 777 aa13.36□□□□□ -0.27
LIMK2-202ENST00000333611 BTBD18B2RXH4 712 aa13.36□□□□□ -0.27
LIMK2-202ENST00000333611 CDC27P30260 824 aa13.36□□□□□ -0.27
LIMK2-202ENST00000333611 SAFBQ15424 915 aaKnown RBP eCLIP13.36□□□□□ -0.27
LIMK2-202ENST00000333611 NKX2-3Q8TAU0 364 aa13.36□□□□□ -0.27
LIMK2-202ENST00000333611 LRRC37A3O60309 1634 aa13.35□□□□□ -0.27
LIMK2-202ENST00000333611 TOPAZ1Q8N9V7 1692 aa13.35□□□□□ -0.27
LIMK2-202ENST00000333611 SNAP23O00161 211 aa13.35□□□□□ -0.27
LIMK2-202ENST00000333611 PDHBP11177 359 aa13.35□□□□□ -0.27
LIMK2-202ENST00000333611 MAP3K9P80192 1104 aa13.35□□□□□ -0.27
LIMK2-202ENST00000333611 GRIN1Q05586 938 aa13.35□□□□□ -0.27
LIMK2-202ENST00000333611 IFIT5Q13325 482 aaKnown RBP13.35□□□□□ -0.27
LIMK2-202ENST00000333611 SLC39A14Q15043 492 aa13.35□□□□□ -0.27
LIMK2-202ENST00000333611 GRIPAP1Q4V328 841 aa13.35□□□□□ -0.27
LIMK2-202ENST00000333611 CYB5R4Q7L1T6 521 aa13.35□□□□□ -0.27
LIMK2-202ENST00000333611 PARD3BQ8TEW8 1205 aa13.35□□□□□ -0.27
LIMK2-202ENST00000333611 ANGEL1Q9UNK9 670 aaKnown RBP13.35□□□□□ -0.27
LIMK2-202ENST00000333611 UBR1Q8IWV7 1749 aa13.35□□□□□ -0.27
LIMK2-202ENST00000333611 EME2A4GXA9 379 aaPredicted RBP13.35□□□□□ -0.27
LIMK2-202ENST00000333611 ARHGAP6O43182 974 aa13.35□□□□□ -0.27
LIMK2-202ENST00000333611 PPFIBP1Q86W92 1011 aa13.35□□□□□ -0.27
LIMK2-202ENST00000333611 NOA1Q8NC60 698 aaKnown RBP13.35□□□□□ -0.27
LIMK2-202ENST00000333611 AIDAQ96BJ3 306 aa13.35□□□□□ -0.27
LIMK2-202ENST00000333611 STRN4Q9NRL3 753 aa13.35□□□□□ -0.27
LIMK2-202ENST00000333611 SLC12A7Q9Y666 1083 aa13.35□□□□□ -0.27
LIMK2-202ENST00000333611 SALL1Q9NSC2 1324 aa13.35□□□□□ -0.27
LIMK2-202ENST00000333611 SOWAHDA6NJG2 315 aa13.34□□□□□ -0.27
LIMK2-202ENST00000333611 CCDC175P0C221 793 aa13.34□□□□□ -0.27
LIMK2-202ENST00000333611 TBC1D10CQ8IV04 446 aa13.34□□□□□ -0.27
LIMK2-202ENST00000333611 CEP120Q8N960 986 aa13.34□□□□□ -0.27
LIMK2-202ENST00000333611 APPBP2Q92624 585 aa13.34□□□□□ -0.27
LIMK2-202ENST00000333611 ZKSCAN4Q969J2 545 aaPredicted RBP13.34□□□□□ -0.27
LIMK2-202ENST00000333611 SAMSN1Q9NSI8 373 aaKnown RBP13.34□□□□□ -0.27
LIMK2-202ENST00000333611 SERTAD1Q9UHV2 236 aa13.34□□□□□ -0.27
LIMK2-202ENST00000333611 IQSEC3Q9UPP2 1182 aaPredicted RBP13.34□□□□□ -0.27
LIMK2-202ENST00000333611 RIPOR2Q9Y4F9 1068 aa13.34□□□□□ -0.27
LIMK2-202ENST00000333611 CUTAO60888 179 aa13.34□□□□□ -0.27
LIMK2-202ENST00000333611 GCFC2P16383 781 aaKnown RBP13.34□□□□□ -0.27
LIMK2-202ENST00000333611 TOM1L2Q6ZVM7 507 aa13.34□□□□□ -0.27
LIMK2-202ENST00000333611 SMYD4Q8IYR2 804 aaPredicted RBP13.34□□□□□ -0.27
LIMK2-202ENST00000333611 DCAF5Q96JK2 942 aa13.34□□□□□ -0.27
LIMK2-202ENST00000333611 GUCA1BQ9UMX6 200 aa13.34□□□□□ -0.27
LIMK2-202ENST00000333611 GOLGA6BA6NDN3 693 aa13.34□□□□□ -0.27
LIMK2-202ENST00000333611 POTEB2H3BUK9 544 aa13.34□□□□□ -0.27
LIMK2-202ENST00000333611 BACH1O14867 736 aa13.34□□□□□ -0.27
LIMK2-202ENST00000333611 METTL16Q86W50 562 aaKnown RBP13.34□□□□□ -0.27
LIMK2-202ENST00000333611 MB21D2Q8IYB1 491 aaPredicted RBP13.34□□□□□ -0.27
LIMK2-202ENST00000333611 SLC35F6Q8N357 371 aa13.34□□□□□ -0.27
LIMK2-202ENST00000333611 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.34□□□□□ -0.27
LIMK2-202ENST00000333611 ANKZF1Q9H8Y5 726 aa13.34□□□□□ -0.27
LIMK2-202ENST00000333611 HOOK1Q9UJC3 728 aaKnown RBP13.34□□□□□ -0.27
LIMK2-202ENST00000333611 RGPD2P0DJD1 1756 aa13.34□□□□□ -0.27
LIMK2-202ENST00000333611 UPP2O95045 317 aa13.33□□□□□ -0.27
LIMK2-202ENST00000333611 SND1Q7KZF4 910 aaKnown RBP eCLIP13.33□□□□□ -0.27
LIMK2-202ENST00000333611 GPIHBP1Q8IV16 184 aa13.33□□□□□ -0.27
LIMK2-202ENST00000333611 CNKSR2Q8WXI2 1034 aa13.33□□□□□ -0.27
LIMK2-202ENST00000333611 L1RE1Q9UN81 338 aa13.33□□□□□ -0.27
LIMK2-202ENST00000333611 CDKL5O76039 1030 aa13.33□□□□□ -0.28
LIMK2-202ENST00000333611 HPDP32754 393 aaPredicted RBP13.33□□□□□ -0.28
LIMK2-202ENST00000333611 IRAK1P51617 712 aa13.33□□□□□ -0.28
LIMK2-202ENST00000333611 NR5A1Q13285 461 aa13.33□□□□□ -0.28
LIMK2-202ENST00000333611 FOXP4Q8IVH2 680 aaPredicted RBP13.33□□□□□ -0.28
LIMK2-202ENST00000333611 NAPBQ9H115 298 aa13.33□□□□□ -0.28
LIMK2-202ENST00000333611 TUBB4AP04350 444 aa13.33□□□□□ -0.28
LIMK2-202ENST00000333611 VSTM4Q8IW00 320 aa13.33□□□□□ -0.28
LIMK2-202ENST00000333611 ARMC2Q8NEN0 867 aa13.33□□□□□ -0.28
LIMK2-202ENST00000333611 MRPL44Q9H9J2 332 aaKnown RBP13.33□□□□□ -0.28
LIMK2-202ENST00000333611 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.33□□□□□ -0.28
LIMK2-202ENST00000333611 H7C1W4 665 aa13.32□□□□□ -0.28
LIMK2-202ENST00000333611 FMR1Q06787 632 aaKnown RBP eCLIP13.32□□□□□ -0.283e-12■■■■■ 43.2
LIMK2-202ENST00000333611 SSRP1Q08945 709 aaKnown RBP13.32□□□□□ -0.28
LIMK2-202ENST00000333611 SF3B2Q13435 895 aaKnown RBP13.32□□□□□ -0.28
LIMK2-202ENST00000333611 NBPF20Q3BBV1 942 aa13.32□□□□□ -0.28
LIMK2-202ENST00000333611 APOA5Q6Q788 366 aa13.32□□□□□ -0.28
LIMK2-202ENST00000333611 PNMA8AQ86V59 439 aaPredicted RBP13.32□□□□□ -0.28
LIMK2-202ENST00000333611 DIS3L2Q8IYB7 885 aaKnown RBP13.32□□□□□ -0.28
LIMK2-202ENST00000333611 PSMB7Q99436 277 aa13.32□□□□□ -0.28
LIMK2-202ENST00000333611 UBXN6Q9BZV1 441 aa13.32□□□□□ -0.28
LIMK2-202ENST00000333611 PICK1Q9NRD5 415 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms