RNA–Protein interactions for RNA: ENST00000332296.7

PRAMEF1-201, Transcript of PRAME family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF1, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF1-201ENST00000332296 FEZ1Q99689 392 aa11.56□□□□□ -0.56
PRAMEF1-201ENST00000332296 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.56□□□□□ -0.56
PRAMEF1-201ENST00000332296 SLC26A6Q9BXS9 759 aa11.56□□□□□ -0.56
PRAMEF1-201ENST00000332296 SEC31BQ9NQW1 1179 aa11.56□□□□□ -0.56
PRAMEF1-201ENST00000332296 FAM237AA0A1B0GTK4 181 aa11.55□□□□□ -0.56
PRAMEF1-201ENST00000332296 TMEM232C9JQI7 657 aa11.55□□□□□ -0.56
PRAMEF1-201ENST00000332296 MBD4O95243 580 aa11.55□□□□□ -0.56
PRAMEF1-201ENST00000332296 TPM4P67936 248 aa11.55□□□□□ -0.56
PRAMEF1-201ENST00000332296 ST5P78524 1137 aa11.55□□□□□ -0.56
PRAMEF1-201ENST00000332296 GRIN1Q05586 938 aa11.55□□□□□ -0.56
PRAMEF1-201ENST00000332296 LONRF3Q496Y0 759 aa11.55□□□□□ -0.56
PRAMEF1-201ENST00000332296 FBXO38Q6PIJ6 1188 aa11.55□□□□□ -0.56
PRAMEF1-201ENST00000332296 SYT10Q6XYQ8 523 aa11.55□□□□□ -0.56
PRAMEF1-201ENST00000332296 FOXP4Q8IVH2 680 aaPredicted RBP11.55□□□□□ -0.56
PRAMEF1-201ENST00000332296 ERO1AQ96HE7 468 aa11.55□□□□□ -0.56
PRAMEF1-201ENST00000332296 TMEM87BQ96K49 555 aa11.55□□□□□ -0.56
PRAMEF1-201ENST00000332296 OGFRQ9NZT2 677 aa11.55□□□□□ -0.56
PRAMEF1-201ENST00000332296 DDX41Q9UJV9 622 aaKnown RBP11.55□□□□□ -0.56
PRAMEF1-201ENST00000332296 PARP3Q9Y6F1 533 aa11.55□□□□□ -0.56
PRAMEF1-201ENST00000332296 MYH6P13533 1939 aa11.55□□□□□ -0.56
PRAMEF1-201ENST00000332296 PSDA5PKW4 1024 aaPredicted RBP11.55□□□□□ -0.56
PRAMEF1-201ENST00000332296 SLU7O95391 586 aaKnown RBP11.55□□□□□ -0.56
PRAMEF1-201ENST00000332296 FGFR2P21802 821 aa11.55□□□□□ -0.56
PRAMEF1-201ENST00000332296 BMP6P22004 513 aa11.55□□□□□ -0.56
PRAMEF1-201ENST00000332296 MYL5Q02045 173 aa11.55□□□□□ -0.56
PRAMEF1-201ENST00000332296 PDE4BQ07343 736 aa11.55□□□□□ -0.56
PRAMEF1-201ENST00000332296 R3HDM1Q15032 1099 aaKnown RBP11.55□□□□□ -0.56
PRAMEF1-201ENST00000332296 SGMS1Q86VZ5 419 aa11.55□□□□□ -0.56
PRAMEF1-201ENST00000332296 STK11IPQ8N1F8 1099 aa11.55□□□□□ -0.56
PRAMEF1-201ENST00000332296 EFCAB3Q8N7B9 438 aa11.55□□□□□ -0.56
PRAMEF1-201ENST00000332296 MAGEB6Q8N7X4 407 aa11.55□□□□□ -0.56
PRAMEF1-201ENST00000332296 ARMT1Q9H993 441 aa11.55□□□□□ -0.56
PRAMEF1-201ENST00000332296 ZSWIM5Q9P217 1185 aa11.55□□□□□ -0.56
PRAMEF1-201ENST00000332296 NRXN2Q9P2S2 1712 aa11.55□□□□□ -0.56
PRAMEF1-201ENST00000332296 PRKAB2O43741 272 aa11.54□□□□□ -0.56
PRAMEF1-201ENST00000332296 RASGRF1Q13972 1273 aa11.54□□□□□ -0.56
PRAMEF1-201ENST00000332296 SF3B3Q15393 1217 aaKnown RBP11.54□□□□□ -0.56
PRAMEF1-201ENST00000332296 CPLX2Q6PUV4 134 aaKnown RBP11.54□□□□□ -0.56
PRAMEF1-201ENST00000332296 KRBA2Q6ZNG9 492 aa11.54□□□□□ -0.56
PRAMEF1-201ENST00000332296 IFNL3Q8IZI9 196 aa11.54□□□□□ -0.56
PRAMEF1-201ENST00000332296 JMYQ8N9B5 988 aa11.54□□□□□ -0.56
PRAMEF1-201ENST00000332296 ZNF397Q8NF99 534 aaPredicted RBP11.54□□□□□ -0.56
PRAMEF1-201ENST00000332296 ZKSCAN3Q9BRR0 538 aa11.54□□□□□ -0.56
PRAMEF1-201ENST00000332296 RNF39Q9H2S5 420 aa11.54□□□□□ -0.56
PRAMEF1-201ENST00000332296 INTS13Q9NVM9 706 aa11.54□□□□□ -0.56
PRAMEF1-201ENST00000332296 ANKRD31Q8N7Z5 1873 aa11.54□□□□□ -0.56
PRAMEF1-201ENST00000332296 COL4A1P02462 1669 aa11.54□□□□□ -0.56
PRAMEF1-201ENST00000332296 BTBD18B2RXH4 712 aa11.54□□□□□ -0.56
PRAMEF1-201ENST00000332296 IFIT3O14879 490 aaKnown RBP11.54□□□□□ -0.56
PRAMEF1-201ENST00000332296 FANCGO15287 622 aa11.54□□□□□ -0.56
PRAMEF1-201ENST00000332296 CUTAO60888 179 aa11.54□□□□□ -0.56
PRAMEF1-201ENST00000332296 PRR29P0C7W0 189 aa11.54□□□□□ -0.56
PRAMEF1-201ENST00000332296 KCNJ6P48051 423 aa11.54□□□□□ -0.56
PRAMEF1-201ENST00000332296 TOB1P50616 345 aaPredicted RBP11.54□□□□□ -0.56
PRAMEF1-201ENST00000332296 UBASH3AP57075 661 aa11.54□□□□□ -0.56
PRAMEF1-201ENST00000332296 TTLL12Q14166 644 aaPredicted RBP11.54□□□□□ -0.56
PRAMEF1-201ENST00000332296 PUM3Q15397 648 aaKnown RBP11.54□□□□□ -0.56
PRAMEF1-201ENST00000332296 HSP90AA4PQ58FG1 418 aa11.54□□□□□ -0.56
PRAMEF1-201ENST00000332296 CMTR1Q8N1G2 835 aaKnown RBP11.54□□□□□ -0.56
PRAMEF1-201ENST00000332296 SPATA5Q8NB90 893 aa11.54□□□□□ -0.56
PRAMEF1-201ENST00000332296 NAPBQ9H115 298 aa11.54□□□□□ -0.56
PRAMEF1-201ENST00000332296 L2HGDHQ9H9P8 463 aa11.54□□□□□ -0.56
PRAMEF1-201ENST00000332296 KCNJ14Q9UNX9 436 aa11.54□□□□□ -0.56
PRAMEF1-201ENST00000332296 PCDHA5Q9Y5H7 936 aa11.54□□□□□ -0.56
PRAMEF1-201ENST00000332296 STK36Q9NRP7 1315 aa11.54□□□□□ -0.56
PRAMEF1-201ENST00000332296 KIF2AO00139 706 aaPredicted RBP11.53□□□□□ -0.56
PRAMEF1-201ENST00000332296 ZBTB7AO95365 584 aa11.53□□□□□ -0.56
PRAMEF1-201ENST00000332296 FMNL1O95466 1100 aaPredicted RBP11.53□□□□□ -0.56
PRAMEF1-201ENST00000332296 SERPINC1P01008 464 aa11.53□□□□□ -0.56
PRAMEF1-201ENST00000332296 UQCRFS1P1P0C7P4 283 aa11.53□□□□□ -0.56
PRAMEF1-201ENST00000332296 TRIM29Q14134 588 aa11.53□□□□□ -0.56
PRAMEF1-201ENST00000332296 ALX1Q15699 326 aa11.53□□□□□ -0.56
PRAMEF1-201ENST00000332296 CFAP100Q494V2 611 aa11.53□□□□□ -0.56
PRAMEF1-201ENST00000332296 LCORLQ8N3X6 602 aa11.53□□□□□ -0.56
PRAMEF1-201ENST00000332296 CNNM3Q8NE01 707 aa11.53□□□□□ -0.56
PRAMEF1-201ENST00000332296 LPIN2Q92539 896 aa11.53□□□□□ -0.56
PRAMEF1-201ENST00000332296 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.53□□□□□ -0.56
PRAMEF1-201ENST00000332296 FANCLQ9NW38 375 aa11.53□□□□□ -0.56
PRAMEF1-201ENST00000332296 KCNH3Q9ULD8 1083 aa11.53□□□□□ -0.56
PRAMEF1-201ENST00000332296 SLC12A7Q9Y666 1083 aa11.53□□□□□ -0.56
PRAMEF1-201ENST00000332296 GSG1L2A8MUP6 293 aa11.52□□□□□ -0.56
PRAMEF1-201ENST00000332296 PATL2C9JE40 543 aaKnown RBP11.52□□□□□ -0.56
PRAMEF1-201ENST00000332296 LIFRP42702 1097 aa11.52□□□□□ -0.56
PRAMEF1-201ENST00000332296 PSEN1P49768 467 aa11.52□□□□□ -0.56
PRAMEF1-201ENST00000332296 SSRP1Q08945 709 aaKnown RBP11.52□□□□□ -0.56
PRAMEF1-201ENST00000332296 CCDC93Q567U6 631 aa11.52□□□□□ -0.56
PRAMEF1-201ENST00000332296 RRP12Q5JTH9 1297 aaKnown RBP11.52□□□□□ -0.56
PRAMEF1-201ENST00000332296 NOSTRINQ8IVI9 506 aa11.52□□□□□ -0.56
PRAMEF1-201ENST00000332296 VSTM4Q8IW00 320 aa11.52□□□□□ -0.56
PRAMEF1-201ENST00000332296 GTPBP4Q9BZE4 634 aaKnown RBP11.52□□□□□ -0.56
PRAMEF1-201ENST00000332296 NID2Q14112 1375 aa11.52□□□□□ -0.56
PRAMEF1-201ENST00000332296 MMP1P03956 469 aa11.52□□□□□ -0.57
PRAMEF1-201ENST00000332296 IFNAR1P17181 557 aa11.52□□□□□ -0.57
PRAMEF1-201ENST00000332296 DSG3P32926 999 aa11.52□□□□□ -0.57
PRAMEF1-201ENST00000332296 MDM2Q00987 491 aaPredicted RBP11.52□□□□□ -0.57
PRAMEF1-201ENST00000332296 ERCC6LQ2NKX8 1250 aa11.52□□□□□ -0.57
PRAMEF1-201ENST00000332296 AKNAD1Q5T1N1 836 aa11.52□□□□□ -0.57
PRAMEF1-201ENST00000332296 DIS3L2Q8IYB7 885 aaKnown RBP11.52□□□□□ -0.57
PRAMEF1-201ENST00000332296 GRAMD1CQ8IYS0 662 aa11.52□□□□□ -0.57
PRAMEF1-201ENST00000332296 SLC16A10Q8TF71 515 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms