RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 TBC1D2Q9BYX2 928 aa30.71■■■□□ 2.51
SMDT1-201ENST00000331479 THSD7BQ9C0I4 1608 aa30.7■■■□□ 2.51
SMDT1-201ENST00000331479 PLIN4Q96Q06 1357 aa30.7■■■□□ 2.51
SMDT1-201ENST00000331479 B4E1Z4 1266 aa30.7■■■□□ 2.5
SMDT1-201ENST00000331479 CXCL11O14625 94 aa30.7■■■□□ 2.5
SMDT1-201ENST00000331479 MAP2K2P36507 400 aa30.7■■■□□ 2.5
SMDT1-201ENST00000331479 SNAPC2Q13487 334 aa30.7■■■□□ 2.5
SMDT1-201ENST00000331479 A0A1W2PRG0 241 aa30.69■■■□□ 2.5
SMDT1-201ENST00000331479 NMT2O60551 498 aa30.69■■■□□ 2.5
SMDT1-201ENST00000331479 GTF2A2P52657 109 aa30.69■■■□□ 2.5
SMDT1-201ENST00000331479 ICA1Q05084 483 aa30.69■■■□□ 2.5
SMDT1-201ENST00000331479 DGKZQ13574 1117 aa30.69■■■□□ 2.5
SMDT1-201ENST00000331479 CEP95Q96GE4 821 aa30.69■■■□□ 2.5
SMDT1-201ENST00000331479 KANSL2Q9H9L4 492 aa30.69■■■□□ 2.5
SMDT1-201ENST00000331479 IL17RBQ9NRM6 502 aa30.69■■■□□ 2.5
SMDT1-201ENST00000331479 PTPRFP10586 1907 aa30.69■■■□□ 2.5
SMDT1-201ENST00000331479 KDM4AO75164 1064 aa30.68■■■□□ 2.5
SMDT1-201ENST00000331479 MTMR2Q13614 643 aa30.68■■■□□ 2.5
SMDT1-201ENST00000331479 RASEFQ8IZ41 740 aa30.68■■■□□ 2.5
SMDT1-201ENST00000331479 ESR2Q92731 530 aa30.68■■■□□ 2.5
SMDT1-201ENST00000331479 A0A0G2JLL6 359 aaPredicted RBP30.67■■■□□ 2.5
SMDT1-201ENST00000331479 MANSC4A6NHS7 340 aaPredicted RBP30.67■■■□□ 2.5
SMDT1-201ENST00000331479 EEF2P13639 858 aaKnown RBP30.67■■■□□ 2.5
SMDT1-201ENST00000331479 HSPA4P34932 840 aa30.67■■■□□ 2.5
SMDT1-201ENST00000331479 BACE1P56817 501 aa30.67■■■□□ 2.5
SMDT1-201ENST00000331479 PRRT2Q7Z6L0 340 aaPredicted RBP30.67■■■□□ 2.5
SMDT1-201ENST00000331479 BRI3BPQ8WY22 251 aa30.67■■■□□ 2.5
SMDT1-201ENST00000331479 CNNM2Q9H8M5 875 aa30.67■■■□□ 2.5
SMDT1-201ENST00000331479 CCL15-CCL14A0A0B4J2E2 113 aa30.66■■■□□ 2.5
SMDT1-201ENST00000331479 USP17L10C9JJH3 530 aa30.66■■■□□ 2.5
SMDT1-201ENST00000331479 EPB41L2O43491 1005 aaKnown RBP30.66■■■□□ 2.5
SMDT1-201ENST00000331479 MOGSQ13724 837 aa30.66■■■□□ 2.5
SMDT1-201ENST00000331479 CCL15Q16663 113 aa30.66■■■□□ 2.5
SMDT1-201ENST00000331479 RNF20Q5VTR2 975 aa30.66■■■□□ 2.5
SMDT1-201ENST00000331479 KRT23Q9C075 422 aa30.66■■■□□ 2.5
SMDT1-201ENST00000331479 MTMR4Q9NYA4 1195 aa30.66■■■□□ 2.5
SMDT1-201ENST00000331479 ZSWIM5Q9P217 1185 aa30.66■■■□□ 2.5
SMDT1-201ENST00000331479 TESPA1A2RU30 521 aaPredicted RBP30.66■■■□□ 2.5
SMDT1-201ENST00000331479 ATP2B2Q01814 1243 aa30.66■■■□□ 2.5
SMDT1-201ENST00000331479 PTPN18Q99952 460 aa30.66■■■□□ 2.5
SMDT1-201ENST00000331479 CETPP11597 493 aa30.65■■■□□ 2.5
SMDT1-201ENST00000331479 HMGCS2P54868 508 aa30.65■■■□□ 2.5
SMDT1-201ENST00000331479 COL9A3Q14050 684 aaPredicted RBP30.65■■■□□ 2.5
SMDT1-201ENST00000331479 KCNB2Q92953 911 aa30.65■■■□□ 2.5
SMDT1-201ENST00000331479 TM4SF4P48230 202 aa30.64■■■□□ 2.5
SMDT1-201ENST00000331479 TRDNQ13061 729 aa30.64■■■□□ 2.5
SMDT1-201ENST00000331479 ZYXQ15942 572 aaKnown RBP30.64■■■□□ 2.5
SMDT1-201ENST00000331479 FEZ1Q99689 392 aa30.64■■■□□ 2.5
SMDT1-201ENST00000331479 ZKSCAN3Q9BRR0 538 aa30.64■■■□□ 2.5
SMDT1-201ENST00000331479 SREBF2Q12772 1141 aa30.63■■■□□ 2.49
SMDT1-201ENST00000331479 SH3D19Q5HYK7 790 aa30.63■■■□□ 2.49
SMDT1-201ENST00000331479 CYB5R4Q7L1T6 521 aa30.63■■■□□ 2.49
SMDT1-201ENST00000331479 NCOA7Q8NI08 942 aa30.63■■■□□ 2.49
SMDT1-201ENST00000331479 KIAA1683Q9H0B3 1180 aa30.63■■■□□ 2.49
SMDT1-201ENST00000331479 ARHGEF10LQ9HCE6 1279 aa30.63■■■□□ 2.49
SMDT1-201ENST00000331479 EMILIN3Q9NT22 766 aa30.63■■■□□ 2.49
SMDT1-201ENST00000331479 NYAP2Q9P242 653 aa30.63■■■□□ 2.49
SMDT1-201ENST00000331479 CLIP2Q9UDT6 1046 aa30.63■■■□□ 2.49
SMDT1-201ENST00000331479 IGF2BP3O00425 579 aaKnown RBP eCLIP30.62■■■□□ 2.49
SMDT1-201ENST00000331479 INHBEP58166 350 aa30.62■■■□□ 2.49
SMDT1-201ENST00000331479 TSGA10IPQ3SY00 556 aa30.62■■■□□ 2.49
SMDT1-201ENST00000331479 TCP11L1Q9NUJ3 509 aa30.62■■■□□ 2.49
SMDT1-201ENST00000331479 TMX2Q9Y320 296 aa30.62■■■□□ 2.49
SMDT1-201ENST00000331479 C19orf81C9J6K1 198 aa30.62■■■□□ 2.49
SMDT1-201ENST00000331479 TTLL1O95922 423 aa30.62■■■□□ 2.49
SMDT1-201ENST00000331479 NT5C2P49902 561 aa30.62■■■□□ 2.49
SMDT1-201ENST00000331479 GADL1Q6ZQY3 521 aa30.62■■■□□ 2.49
SMDT1-201ENST00000331479 RALYLQ86SE5 291 aaKnown RBP30.62■■■□□ 2.49
SMDT1-201ENST00000331479 SNX14Q9Y5W7 946 aa30.62■■■□□ 2.49
SMDT1-201ENST00000331479 ZKSCAN1P17029 563 aaPredicted RBP30.61■■■□□ 2.49
SMDT1-201ENST00000331479 NOVP48745 357 aa30.61■■■□□ 2.49
SMDT1-201ENST00000331479 ADCK5Q3MIX3 580 aa30.61■■■□□ 2.49
SMDT1-201ENST00000331479 MB21D2Q8IYB1 491 aaPredicted RBP30.61■■■□□ 2.49
SMDT1-201ENST00000331479 STX8Q9UNK0 236 aa30.61■■■□□ 2.49
SMDT1-201ENST00000331479 BTBD19C9JJ37 291 aa30.6■■■□□ 2.49
SMDT1-201ENST00000331479 KIAA1755Q5JYT7 1200 aa30.6■■■□□ 2.49
SMDT1-201ENST00000331479 GPAT2Q6NUI2 795 aa30.6■■■□□ 2.49
SMDT1-201ENST00000331479 IFNL1Q8IU54 200 aa30.6■■■□□ 2.49
SMDT1-201ENST00000331479 REM2Q8IYK8 340 aaPredicted RBP30.6■■■□□ 2.49
SMDT1-201ENST00000331479 LOC285556D6RIA3 1793 aa30.6■■■□□ 2.49
SMDT1-201ENST00000331479 MYH4Q9Y623 1939 aa30.59■■■□□ 2.49
SMDT1-201ENST00000331479 USP17L2Q6R6M4 530 aa30.59■■■□□ 2.49
SMDT1-201ENST00000331479 FASTKD5Q7L8L6 764 aaKnown RBP30.59■■■□□ 2.49
SMDT1-201ENST00000331479 CHST3Q7LGC8 479 aa30.59■■■□□ 2.49
SMDT1-201ENST00000331479 FAM43AQ8N2R8 423 aa30.59■■■□□ 2.49
SMDT1-201ENST00000331479 MKL1Q969V6 931 aa30.59■■■□□ 2.49
SMDT1-201ENST00000331479 TREML2Q5T2D2 321 aa30.58■■■□□ 2.49
SMDT1-201ENST00000331479 RCSD1Q6JBY9 416 aa30.58■■■□□ 2.49
SMDT1-201ENST00000331479 IQCA1Q86XH1 822 aa30.58■■■□□ 2.49
SMDT1-201ENST00000331479 LRRC47Q8N1G4 583 aaKnown RBP30.58■■■□□ 2.49
SMDT1-201ENST00000331479 JMYQ8N9B5 988 aa30.58■■■□□ 2.49
SMDT1-201ENST00000331479 TMOD4Q9NZQ9 345 aa30.58■■■□□ 2.49
SMDT1-201ENST00000331479 EIF5BO60841 1220 aaKnown RBP30.58■■■□□ 2.49
SMDT1-201ENST00000331479 USP14P54578 494 aa30.58■■■□□ 2.49
SMDT1-201ENST00000331479 ANTXR2P58335 489 aa30.58■■■□□ 2.49
SMDT1-201ENST00000331479 PROCA1Q8NCQ7 364 aaPredicted RBP30.58■■■□□ 2.49
SMDT1-201ENST00000331479 C12orf42Q96LP6 360 aa30.58■■■□□ 2.49
SMDT1-201ENST00000331479 ZSCAN10Q96SZ4 725 aaPredicted RBP30.58■■■□□ 2.49
SMDT1-201ENST00000331479 SH2D4AQ9H788 454 aa30.58■■■□□ 2.49
SMDT1-201ENST00000331479 VCPKMTQ9H867 229 aa30.57■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms