RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 SWAP70Q9UH65 585 aa21.86■■□□□ 1.09
RAB28-202ENST00000330852 PLXNB2O15031 1838 aa21.86■■□□□ 1.09
RAB28-202ENST00000330852 MAPK4P31152 587 aa21.86■■□□□ 1.09
RAB28-202ENST00000330852 DCTPP1Q9H773 170 aa21.86■■□□□ 1.09
RAB28-202ENST00000330852 RBPJLQ9UBG7 517 aa21.86■■□□□ 1.09
RAB28-202ENST00000330852 BAZ2AQ9UIF9 1905 aaKnown RBP21.85■■□□□ 1.09
RAB28-202ENST00000330852 HMGCRP04035 888 aa21.85■■□□□ 1.09
RAB28-202ENST00000330852 UBE2Q1Q7Z7E8 422 aa21.85■■□□□ 1.09
RAB28-202ENST00000330852 SDR42E1Q8WUS8 393 aa21.85■■□□□ 1.09
RAB28-202ENST00000330852 SOCS4Q8WXH5 440 aa21.85■■□□□ 1.09
RAB28-202ENST00000330852 PAK6Q9NQU5 681 aaPredicted RBP21.85■■□□□ 1.09
RAB28-202ENST00000330852 XRCC5P13010 732 aaKnown RBP21.84■■□□□ 1.09
RAB28-202ENST00000330852 ERVK-9P63128 1117 aa21.84■■□□□ 1.09
RAB28-202ENST00000330852 ERVK-24P63145 666 aa21.84■■□□□ 1.09
RAB28-202ENST00000330852 AMOTL1Q8IY63 956 aa21.84■■□□□ 1.09
RAB28-202ENST00000330852 DDRGK1Q96HY6 314 aa21.84■■□□□ 1.09
RAB28-202ENST00000330852 HTATIP2Q9BUP3 242 aa21.84■■□□□ 1.09
RAB28-202ENST00000330852 ARMT1Q9H993 441 aa21.84■■□□□ 1.09
RAB28-202ENST00000330852 TXNRD2Q9NNW7 524 aa21.84■■□□□ 1.09
RAB28-202ENST00000330852 ECHDC1Q9NTX5 307 aa21.84■■□□□ 1.09
RAB28-202ENST00000330852 RABGAP1Q9Y3P9 1069 aa21.84■■□□□ 1.09
RAB28-202ENST00000330852 CATSPERGQ6ZRH7 1159 aa21.83■■□□□ 1.09
RAB28-202ENST00000330852 CCAR1Q8IX12 1150 aaKnown RBP21.83■■□□□ 1.09
RAB28-202ENST00000330852 TRMT44Q8IYL2 757 aaKnown RBP21.83■■□□□ 1.09
RAB28-202ENST00000330852 GPATCH3Q96I76 525 aa21.83■■□□□ 1.09
RAB28-202ENST00000330852 NUDT12Q9BQG2 462 aa21.83■■□□□ 1.09
RAB28-202ENST00000330852 MBD4O95243 580 aa21.83■■□□□ 1.08
RAB28-202ENST00000330852 CCNA1P78396 465 aa21.83■■□□□ 1.08
RAB28-202ENST00000330852 LBX2Q6XYB7 198 aa21.83■■□□□ 1.08
RAB28-202ENST00000330852 GUCY1A2P33402 732 aa21.82■■□□□ 1.08
RAB28-202ENST00000330852 TMEM179Q6ZVK1 233 aa21.82■■□□□ 1.08
RAB28-202ENST00000330852 ACER1Q8TDN7 264 aa21.82■■□□□ 1.08
RAB28-202ENST00000330852 CCDC17Q96LX7 622 aa21.82■■□□□ 1.08
RAB28-202ENST00000330852 CEP290O15078 2479 aa21.82■■□□□ 1.08
RAB28-202ENST00000330852 FARP2O94887 1054 aaPredicted RBP21.81■■□□□ 1.08
RAB28-202ENST00000330852 VCAM1P19320 739 aa21.81■■□□□ 1.08
RAB28-202ENST00000330852 SEPT2Q15019 361 aa21.81■■□□□ 1.08
RAB28-202ENST00000330852 ZYXQ15942 572 aaKnown RBP21.81■■□□□ 1.08
RAB28-202ENST00000330852 DEFB118Q96PH6 123 aa21.81■■□□□ 1.08
RAB28-202ENST00000330852 CRISPLD2Q9H0B8 497 aa21.81■■□□□ 1.08
RAB28-202ENST00000330852 RPTORQ8N122 1335 aa21.81■■□□□ 1.08
RAB28-202ENST00000330852 SMARCA5O60264 1052 aaPredicted RBP21.8■■□□□ 1.08
RAB28-202ENST00000330852 GLRX3O76003 335 aaKnown RBP21.8■■□□□ 1.08
RAB28-202ENST00000330852 TFRCP02786 760 aaKnown RBP21.8■■□□□ 1.08
RAB28-202ENST00000330852 Q3C1V9 767 aa21.8■■□□□ 1.08
RAB28-202ENST00000330852 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.8■■□□□ 1.08
RAB28-202ENST00000330852 MPHOSPH10O00566 681 aaKnown RBP21.8■■□□□ 1.08
RAB28-202ENST00000330852 C12orf60Q5U649 245 aa21.8■■□□□ 1.08
RAB28-202ENST00000330852 PAGR1Q9BTK6 254 aa21.8■■□□□ 1.08
RAB28-202ENST00000330852 HMX1Q9NP08 348 aaPredicted RBP21.8■■□□□ 1.08
RAB28-202ENST00000330852 PRKAB2O43741 272 aa21.79■■□□□ 1.08
RAB28-202ENST00000330852 PLEKHH3Q7Z736 793 aa21.79■■□□□ 1.08
RAB28-202ENST00000330852 ANKLE1Q8NAG6 615 aa21.79■■□□□ 1.08
RAB28-202ENST00000330852 DPF3Q92784 378 aa21.79■■□□□ 1.08
RAB28-202ENST00000330852 SH2D4AQ9H788 454 aa21.79■■□□□ 1.08
RAB28-202ENST00000330852 HABP4Q5JVS0 413 aaKnown RBP21.78■■□□□ 1.08
RAB28-202ENST00000330852 GPR142Q7Z601 462 aa21.78■■□□□ 1.08
RAB28-202ENST00000330852 KBTBD3Q8NAB2 608 aa21.78■■□□□ 1.08
RAB28-202ENST00000330852 USP6NLQ92738 828 aa21.78■■□□□ 1.08
RAB28-202ENST00000330852 HOXC10Q9NYD6 342 aa21.78■■□□□ 1.08
RAB28-202ENST00000330852 USP17L12C9JPN9 530 aa21.77■■□□□ 1.08
RAB28-202ENST00000330852 USP17L21D6R901 530 aa21.77■■□□□ 1.08
RAB28-202ENST00000330852 CYP2D6P10635 497 aa21.77■■□□□ 1.08
RAB28-202ENST00000330852 CYP2B6P20813 491 aa21.77■■□□□ 1.08
RAB28-202ENST00000330852 RGS2P41220 211 aa21.77■■□□□ 1.08
RAB28-202ENST00000330852 MORN1Q5T089 497 aa21.77■■□□□ 1.08
RAB28-202ENST00000330852 POTEEQ6S8J3 1075 aa21.77■■□□□ 1.08
RAB28-202ENST00000330852 LPAR1Q92633 364 aa21.77■■□□□ 1.08
RAB28-202ENST00000330852 PORCNQ9H237 461 aa21.77■■□□□ 1.08
RAB28-202ENST00000330852 RPAP3Q9H6T3 665 aaPredicted RBP21.77■■□□□ 1.08
RAB28-202ENST00000330852 ARHGEF10LQ9HCE6 1279 aa21.77■■□□□ 1.08
RAB28-202ENST00000330852 SLC4A4Q9Y6R1 1079 aa21.77■■□□□ 1.08
RAB28-202ENST00000330852 ZFYP08048 801 aaPredicted RBP21.77■■□□□ 1.08
RAB28-202ENST00000330852 COG2Q14746 738 aa21.77■■□□□ 1.08
RAB28-202ENST00000330852 LRRFIP1Q32MZ4 808 aaKnown RBP21.77■■□□□ 1.08
RAB28-202ENST00000330852 SLFNL1Q499Z3 407 aa21.77■■□□□ 1.08
RAB28-202ENST00000330852 MAP3K21Q5TCX8 1036 aa21.77■■□□□ 1.08
RAB28-202ENST00000330852 GIMAP6Q6P9H5 292 aa21.77■■□□□ 1.08
RAB28-202ENST00000330852 C16orf86Q6ZW13 317 aa21.77■■□□□ 1.08
RAB28-202ENST00000330852 TRIB2Q92519 343 aa21.77■■□□□ 1.08
RAB28-202ENST00000330852 CWC22Q9HCG8 908 aaKnown RBP21.77■■□□□ 1.08
RAB28-202ENST00000330852 NR2E3Q9Y5X4 410 aa21.77■■□□□ 1.08
RAB28-202ENST00000330852 H0YGN5 161 aa21.76■■□□□ 1.07
RAB28-202ENST00000330852 CDK8P49336 464 aa21.76■■□□□ 1.07
RAB28-202ENST00000330852 EVX2Q03828 476 aa21.76■■□□□ 1.07
RAB28-202ENST00000330852 SLC44A5Q8NCS7 719 aa21.76■■□□□ 1.07
RAB28-202ENST00000330852 DYNLL2Q96FJ2 89 aa21.76■■□□□ 1.07
RAB28-202ENST00000330852 PUS7LQ9H0K6 701 aaKnown RBP21.76■■□□□ 1.07
RAB28-202ENST00000330852 A0A1W2PRG0 241 aa21.75■■□□□ 1.07
RAB28-202ENST00000330852 PEX10O60683 326 aa21.75■■□□□ 1.07
RAB28-202ENST00000330852 CNMDO75829 334 aa21.75■■□□□ 1.07
RAB28-202ENST00000330852 APBA2Q99767 749 aa21.75■■□□□ 1.07
RAB28-202ENST00000330852 PCDH10Q9P2E7 1040 aa21.75■■□□□ 1.07
RAB28-202ENST00000330852 ARPP21Q9UBL0 812 aaPredicted RBP21.75■■□□□ 1.07
RAB28-202ENST00000330852 TMX2Q9Y320 296 aa21.75■■□□□ 1.07
RAB28-202ENST00000330852 TTC41PQ6P2S7 1318 aa21.75■■□□□ 1.07
RAB28-202ENST00000330852 RLFQ13129 1914 aa21.75■■□□□ 1.07
RAB28-202ENST00000330852 SPDYE16A6NNV3 312 aaPredicted RBP21.75■■□□□ 1.07
RAB28-202ENST00000330852 ZKSCAN1P17029 563 aaPredicted RBP21.75■■□□□ 1.07
RAB28-202ENST00000330852 APPBP2Q92624 585 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms